BLASTX nr result

ID: Dioscorea21_contig00029095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029095
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326833.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003520450.1| PREDICTED: uncharacterized protein LOC100811...    59   3e-07
ref|XP_003530165.1| PREDICTED: uncharacterized protein LOC100776...    58   7e-07
gb|AAM14832.1| unknown protein [Arabidopsis thaliana]                  57   2e-06
ref|XP_003626724.1| hypothetical protein MTR_8g006370 [Medicago ...    57   2e-06

>ref|XP_002326833.1| predicted protein [Populus trichocarpa] gi|222835148|gb|EEE73583.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/47 (57%), Positives = 35/47 (74%)
 Frame = +2

Query: 50  FGSLIEKAGRVLKASEDDIGWLQRVPGMPFVQDGTGKFDHLLFNIKN 190
           F  LIE+A R ++ S DDIGWLQR  GMP V+DGTG+F  +L NI++
Sbjct: 139 FQGLIERARRTVRGSADDIGWLQRASGMPSVEDGTGRFMEILDNIRH 185


>ref|XP_003520450.1| PREDICTED: uncharacterized protein LOC100811795 [Glycine max]
          Length = 526

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = +2

Query: 50  FGSLIEKAGRVLKASEDDIGWLQRVPGMPFVQDGTGKFDHLLFNIKN 190
           F SLI++A R ++ S DDIGWLQR PGMP V+DGT +F  +L NIK+
Sbjct: 176 FQSLIDRARRTVRGSADDIGWLQRDPGMPPVEDGTERFLEILDNIKH 222


>ref|XP_003530165.1| PREDICTED: uncharacterized protein LOC100776966, partial [Glycine
           max]
          Length = 474

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/45 (60%), Positives = 35/45 (77%)
 Frame = +2

Query: 56  SLIEKAGRVLKASEDDIGWLQRVPGMPFVQDGTGKFDHLLFNIKN 190
           SLI++A R ++ S DDIGWLQR PGMP V+DGT +F  +L NIK+
Sbjct: 126 SLIDRARRTVRGSADDIGWLQRDPGMPSVEDGTVRFLEILDNIKH 170


>gb|AAM14832.1| unknown protein [Arabidopsis thaliana]
          Length = 461

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = +2

Query: 50  FGSLIEKAGRVLKASEDDIGWLQRVPGMPFVQDGTGKFDHLLFNIKNY 193
           F  LIE+A R ++ S DDIGWLQR P MP V+DGT +F+ +L +I N+
Sbjct: 134 FQGLIERARRTVRGSADDIGWLQRAPEMPPVEDGTDRFNKILEDIGNH 181


>ref|XP_003626724.1| hypothetical protein MTR_8g006370 [Medicago truncatula]
           gi|355520746|gb|AET01200.1| hypothetical protein
           MTR_8g006370 [Medicago truncatula]
          Length = 521

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +2

Query: 50  FGSLIEKAGRVLKASEDDIGWLQRVPGMPFVQDGTGKFDHLLFNIKN 190
           F SLI++A R ++ S DDIGWLQ   GMP V+DGT +F  +L NIK+
Sbjct: 171 FRSLIDRARRTVRGSADDIGWLQHAQGMPPVEDGTERFQEILDNIKH 217


Top