BLASTX nr result

ID: Dioscorea21_contig00029057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029057
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187269.1| ribosomal protein L34e-like protein [Arabidopsi...    59   3e-07
ref|XP_002277551.2| PREDICTED: uncharacterized protein At5g19025...    59   4e-07
emb|CBI26176.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_002882453.1| hypothetical protein ARALYDRAFT_896728 [Arab...    58   7e-07
emb|CAN71157.1| hypothetical protein VITISV_036761 [Vitis vinifera]    57   2e-06

>ref|NP_187269.1| ribosomal protein L34e-like protein [Arabidopsis thaliana]
           gi|6862922|gb|AAF30311.1|AC018907_11 unknown protein
           [Arabidopsis thaliana] gi|62867643|gb|AAY17425.1|
           At3g06180 [Arabidopsis thaliana]
           gi|90962960|gb|ABE02404.1| At3g06180 [Arabidopsis
           thaliana] gi|332640836|gb|AEE74357.1| ribosomal protein
           L34e-like protein [Arabidopsis thaliana]
          Length = 241

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/43 (62%), Positives = 29/43 (67%)
 Frame = +2

Query: 2   PPNGRAVLLFRLRCGCPVSKLEAWGPXXXXXXXXXXXXLALEG 130
           PPNGRAVLLFR RCGCPV+KLE WGP            LAL+G
Sbjct: 194 PPNGRAVLLFRSRCGCPVAKLEGWGPKRGRRHKKSQANLALKG 236


>ref|XP_002277551.2| PREDICTED: uncharacterized protein At5g19025 [Vitis vinifera]
          Length = 216

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/43 (60%), Positives = 28/43 (65%)
 Frame = +2

Query: 2   PPNGRAVLLFRLRCGCPVSKLEAWGPXXXXXXXXXXXXLALEG 130
           PPNGRAVLLFR RCGCP++KLE WGP            LAL G
Sbjct: 169 PPNGRAVLLFRARCGCPIAKLEGWGPKRGRRHKKALASLALNG 211


>emb|CBI26176.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/43 (60%), Positives = 28/43 (65%)
 Frame = +2

Query: 2   PPNGRAVLLFRLRCGCPVSKLEAWGPXXXXXXXXXXXXLALEG 130
           PPNGRAVLLFR RCGCP++KLE WGP            LAL G
Sbjct: 237 PPNGRAVLLFRARCGCPIAKLEGWGPKRGRRHKKALASLALNG 279


>ref|XP_002882453.1| hypothetical protein ARALYDRAFT_896728 [Arabidopsis lyrata subsp.
           lyrata] gi|297328293|gb|EFH58712.1| hypothetical protein
           ARALYDRAFT_896728 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/43 (60%), Positives = 29/43 (67%)
 Frame = +2

Query: 2   PPNGRAVLLFRLRCGCPVSKLEAWGPXXXXXXXXXXXXLALEG 130
           PPNGRAVLLFR RCGCPV+KL+ WGP            LAL+G
Sbjct: 172 PPNGRAVLLFRSRCGCPVAKLQGWGPKRGRRHKKSQANLALKG 214


>emb|CAN71157.1| hypothetical protein VITISV_036761 [Vitis vinifera]
          Length = 371

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +2

Query: 2   PPNGRAVLLFRLRCGCPVSKLEAWGP 79
           PPNGRAVLLFR RCGCP++KLE WGP
Sbjct: 169 PPNGRAVLLFRARCGCPIAKLEGWGP 194


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