BLASTX nr result

ID: Dioscorea21_contig00029041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029041
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465500.1| hypothetical protein SORBIDRAFT_01g039960 [S...    69   4e-10
tpg|DAA44574.1| TPA: hypothetical protein ZEAMMB73_315261 [Zea m...    68   1e-09
dbj|BAJ98601.1| predicted protein [Hordeum vulgare subsp. vulgare]     64   2e-08
ref|NP_001049666.1| Os03g0267600 [Oryza sativa Japonica Group] g...    62   9e-08
gb|AFW88858.1| hypothetical protein ZEAMMB73_942218 [Zea mays]         57   2e-06

>ref|XP_002465500.1| hypothetical protein SORBIDRAFT_01g039960 [Sorghum bicolor]
           gi|241919354|gb|EER92498.1| hypothetical protein
           SORBIDRAFT_01g039960 [Sorghum bicolor]
          Length = 894

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 55/161 (34%), Positives = 80/161 (49%), Gaps = 1/161 (0%)
 Frame = +2

Query: 89  RSSSLREGSNMHQVRSVASSENPHVDKVSPQNKGXXXXXXXXXXXXVKPKNRSNVSGPIA 268
           RSSSL+E    H+  ++    +   D+ SP +KG            +KP++ S V     
Sbjct: 427 RSSSLKESP--HRQPNIVPPVDKTGDRSSPNSKGRRSPLRRMLDPILKPRHSSPVRPSFV 484

Query: 269 CATTRHTNEQNDCKRSLFQDGAVDGSIKLGMASMN-SSKCQAECNHNSSNEVGSTNNSTS 445
               +     N  K+SL   G+V  +++     +  +S    E N N    V   N++  
Sbjct: 485 ---PKCHLPVNTTKQSLDLGGSVPQNVQRRSVDLVVNSNYPIEANINQPPRV-LLNSARY 540

Query: 446 TLDEKHVPSRRQALLQLAWKNGLPLFMFSSNNNDILAATVK 568
           T  +K   + RQALLQLAWKNGLPLFM S  ++DILAATV+
Sbjct: 541 TQKDKDSATTRQALLQLAWKNGLPLFMLSYGDSDILAATVR 581


>tpg|DAA44574.1| TPA: hypothetical protein ZEAMMB73_315261 [Zea mays]
           gi|414866018|tpg|DAA44575.1| TPA: hypothetical protein
           ZEAMMB73_315261 [Zea mays] gi|414866019|tpg|DAA44576.1|
           TPA: hypothetical protein ZEAMMB73_315261 [Zea mays]
          Length = 890

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
 Frame = +2

Query: 71  GQIWHR--RSSSLREGSNMHQVRSVASSENPHVDKVSPQNKGXXXXXXXXXXXXVKPKNR 244
           G + +R  RSSSL+E  +  Q   V   +    D+ SP +KG            +KP++ 
Sbjct: 419 GSVMNRVSRSSSLKESPHARQPNVVPPVDKTG-DRSSPNSKGRRSPLRRMLDPILKPRH- 476

Query: 245 SNVSGPIACATTRHTN-EQNDCKRSLFQDGAVDGSIKLGMASMN-SSKCQAECNHNSSNE 418
              S PI  +     +   N  K+SL   G+V  +++     +  +S  + E N N    
Sbjct: 477 ---SSPIRPSFVPKCHLPVNTTKQSLDLGGSVPQNMQRRSVDLVVNSNYRIEANTNQPPR 533

Query: 419 VGSTNNSTSTLDEKHVPSRRQALLQLAWKNGLPLFMFSSNNNDILAATVK 568
           V   N++     EK   + RQA LQLAWKNGLPLFM S  ++DILAATV+
Sbjct: 534 V-LLNSARYIQKEKDSTTTRQAFLQLAWKNGLPLFMLSYGDSDILAATVR 582


>dbj|BAJ98601.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 894

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 57/163 (34%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
 Frame = +2

Query: 89  RSSSLREGSNMHQVRSVASSENPHVDKVSPQNKGXXXXXXXXXXXXVKPKNRSNVSGPIA 268
           RSSSL+E  +    R+  S +  + DK S  ++G            +KP+  S    PI 
Sbjct: 421 RSSSLKEAPSPR--RTDTSVDKINEDKRS-NSRGRRSPLRRMLDPLLKPRQPSTSVAPIQ 477

Query: 269 CATTRHTN-EQNDCKRSLFQDGAVDGSI-KLGMASMNSSKCQAECNHNSSNEVGSTNNST 442
            +     +   N  K+SL  +G+   ++ +  + ++ +S   AE N N    V    NS 
Sbjct: 478 PSFVPKCHLSSNINKQSLNLEGSGSQNVQRRSVDAVVNSNNHAEANINQPPRV--LLNSE 535

Query: 443 STLDEKHVPSR-RQALLQLAWKNGLPLFMFSSNNNDILAATVK 568
             L+++   +R RQALLQLAWKNGLPLFM S  ++DILAATV+
Sbjct: 536 RYLNQERDSTRTRQALLQLAWKNGLPLFMLSYGDSDILAATVR 578


>ref|NP_001049666.1| Os03g0267600 [Oryza sativa Japonica Group]
           gi|108707365|gb|ABF95160.1| expressed protein [Oryza
           sativa Japonica Group] gi|113548137|dbj|BAF11580.1|
           Os03g0267600 [Oryza sativa Japonica Group]
           gi|215704306|dbj|BAG93146.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 899

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 55/167 (32%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
 Frame = +2

Query: 89  RSSSLREGSNMHQVRSVASSENPHVDKVSPQNKGXXXXXXXXXXXXVKPKNRSNVSGPIA 268
           R SSL++G    Q  +  S +  + DK S  NKG            +    +S+ SGPI 
Sbjct: 426 RCSSLKDGPCPRQPEASTSVDKINGDK-SSGNKGSRRSPLRRMLDPILKPRQSSTSGPIQ 484

Query: 269 ------CATTRHTNEQNDCKRSLFQDG-AVDGSIKLGMASMNSSKCQAECNHNSSNEVGS 427
                 C    H ++Q     SL   G A+    +  + S+ +S C+ E N N   +V  
Sbjct: 485 PSFVPKCHLPGHIDKQ-----SLSLGGSALQNVQRRSVDSVVNSNCRTETNTNQPPQV-- 537

Query: 428 TNNSTSTLDEKHVPSRRQALLQLAWKNGLPLFMFSSNNNDILAATVK 568
            N+      +    + R ALLQLAWKNGLP FM S   +DIL ATV+
Sbjct: 538 LNSERYLQQDIDSTTTRHALLQLAWKNGLPFFMLSC-GSDILVATVR 583


>gb|AFW88858.1| hypothetical protein ZEAMMB73_942218 [Zea mays]
          Length = 1068

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
 Frame = +2

Query: 92   SSSLREGSNMHQVRSVASSENPHVDKVSPQNKGXXXXXXXXXXXXVKPKNRSNVSGPIA- 268
            SSSL+E  ++ Q   V   +    D+ SP +KG            +KP++ S V      
Sbjct: 626  SSSLKESPHIRQPNIVPPVDKTG-DRSSPNSKGRRSPLRRMLDPILKPRHSSPVRPSFVP 684

Query: 269  -CATTRHTNEQNDCKRSLFQDGAVDGSIKLGMASMNSSKCQAECNHNSSNEVGSTNNSTS 445
             C    +T +Q               S+ LG +  ++ +        S+  +   N+S +
Sbjct: 685  KCQLPVNTTKQ---------------SLDLGKSVPHNVQ-------RSARYIQKGNDSAT 722

Query: 446  TLDEKHVPSRRQALLQLAWKNGLPLFMFSSNNNDILAATVK 568
            T         RQALLQLAWKNGLPLF+ S  ++DILAATV+
Sbjct: 723  T---------RQALLQLAWKNGLPLFILSYGDSDILAATVR 754


Top