BLASTX nr result

ID: Dioscorea21_contig00029030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029030
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK04547.1| predicted protein [Hordeum vulgare subsp. vulgare]     69   5e-10
ref|XP_002436771.1| hypothetical protein SORBIDRAFT_10g008490 [S...    69   5e-10
ref|NP_001146539.1| nucleic acid binding protein [Zea mays] gi|2...    69   5e-10
gb|ACG33609.1| nucleic acid binding protein [Zea mays]                 69   5e-10
ref|NP_001057246.2| Os06g0237100 [Oryza sativa Japonica Group] g...    68   7e-10

>dbj|BAK04547.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 209

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +3

Query: 3   YDYIAKRRYAWFGKDDKCLVMHDKDLLDRFIDREELFGDWDEN 131
           YDYIA+ RY WFGKDD+CLV  D++LL+RFIDR+E+ GD   N
Sbjct: 164 YDYIARNRYDWFGKDDECLVTKDRELLERFIDRDEMLGDGPSN 206


>ref|XP_002436771.1| hypothetical protein SORBIDRAFT_10g008490 [Sorghum bicolor]
           gi|241914994|gb|EER88138.1| hypothetical protein
           SORBIDRAFT_10g008490 [Sorghum bicolor]
          Length = 219

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = +3

Query: 3   YDYIAKRRYAWFGKDDKCLVMHDKDLLDRFIDREELFGDWDEN*LF 140
           YDYIAK RY WFGKDD+C+V  DK++L+RFIDREE+ G    N  F
Sbjct: 174 YDYIAKNRYDWFGKDDECIVTKDKEILERFIDREEMLGGGPSNSFF 219


>ref|NP_001146539.1| nucleic acid binding protein [Zea mays] gi|219887741|gb|ACL54245.1|
           unknown [Zea mays] gi|413952552|gb|AFW85201.1| nucleic
           acid binding protein [Zea mays]
          Length = 211

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = +3

Query: 3   YDYIAKRRYAWFGKDDKCLVMHDKDLLDRFIDREELFGDWDEN*LF 140
           YDYIAK RY WFGKDD+C+V  DK++L+RFIDREE+ G    N  F
Sbjct: 166 YDYIAKNRYDWFGKDDECIVTKDKEILERFIDREEMLGGGPSNSFF 211


>gb|ACG33609.1| nucleic acid binding protein [Zea mays]
          Length = 211

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = +3

Query: 3   YDYIAKRRYAWFGKDDKCLVMHDKDLLDRFIDREELFGDWDEN*LF 140
           YDYIAK RY WFGKDD+C+V  DK++L+RFIDREE+ G    N  F
Sbjct: 166 YDYIAKNRYDWFGKDDECIVTKDKEILERFIDREEMLGGGPSNSFF 211


>ref|NP_001057246.2| Os06g0237100 [Oryza sativa Japonica Group]
           gi|255676871|dbj|BAF19160.2| Os06g0237100 [Oryza sativa
           Japonica Group]
          Length = 215

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   YDYIAKRRYAWFGKDDKCLVMHDKDLLDRFIDREELFGD 119
           YDYIAK RY WFGKDD+C+V  +K+LL+RFIDREE+ GD
Sbjct: 165 YDYIAKNRYDWFGKDDECIVTKNKELLERFIDREEMLGD 203


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