BLASTX nr result

ID: Dioscorea21_contig00029025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029025
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309166.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
dbj|BAC75560.1| hypothetical protein [Oryza sativa Japonica Group]    201   7e-50
ref|NP_001175347.1| Os07g0692401 [Oryza sativa Japonica Group] g...   201   7e-50
ref|XP_002526697.1| conserved hypothetical protein [Ricinus comm...   199   1e-49
gb|AFW71483.1| hypothetical protein ZEAMMB73_430632 [Zea mays]        198   4e-49

>ref|XP_002309166.1| predicted protein [Populus trichocarpa] gi|222855142|gb|EEE92689.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score =  203 bits (516), Expect = 1e-50
 Identities = 89/119 (74%), Positives = 107/119 (89%)
 Frame = +1

Query: 1   RGMGRIKPSAGDSANGLVSNDLHSIHGFDFAEGLKSTVSEKDFVVVKMDIEGTEFDLVPR 180
           RGMGRI+P   DS++G  + +++ I GFDFAE LKSTV+EKDFVV+KMD+EGTEFDL+PR
Sbjct: 397 RGMGRIQPVKSDSSSGSFNGEVNEIEGFDFAEWLKSTVTEKDFVVMKMDVEGTEFDLIPR 456

Query: 181 LFETGAICLIDELFLECHYNRWQRCCPGERSPKYKNTYGQCLELFSSLRESGVLVHQWW 357
           LFETGAICLIDE+FLECHY+RWQRCCPG+RS KY+ TYGQCL+LF+SLR+ GVLVHQWW
Sbjct: 457 LFETGAICLIDEIFLECHYSRWQRCCPGQRSSKYEKTYGQCLDLFTSLRDRGVLVHQWW 515


>dbj|BAC75560.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 480

 Score =  201 bits (510), Expect = 7e-50
 Identities = 91/119 (76%), Positives = 105/119 (88%)
 Frame = +1

Query: 1   RGMGRIKPSAGDSANGLVSNDLHSIHGFDFAEGLKSTVSEKDFVVVKMDIEGTEFDLVPR 180
           RGMGRI+P AG   +G    ++ S+  FDFAE LK TVSE+D+VV+KMD+EGTEFDL+PR
Sbjct: 366 RGMGRIRPMAGKKMSG----EVRSVPAFDFAEWLKRTVSEQDYVVMKMDVEGTEFDLIPR 421

Query: 181 LFETGAICLIDELFLECHYNRWQRCCPGERSPKYKNTYGQCLELFSSLRESGVLVHQWW 357
           LF+TGAICLIDELFLECHYNRWQ+CCPGERSPKY+NTY +CLELFSSLRESGVLVHQWW
Sbjct: 422 LFDTGAICLIDELFLECHYNRWQKCCPGERSPKYQNTYDECLELFSSLRESGVLVHQWW 480


>ref|NP_001175347.1| Os07g0692401 [Oryza sativa Japonica Group]
           gi|222637734|gb|EEE67866.1| hypothetical protein
           OsJ_25678 [Oryza sativa Japonica Group]
           gi|255678081|dbj|BAH94075.1| Os07g0692401 [Oryza sativa
           Japonica Group]
          Length = 484

 Score =  201 bits (510), Expect = 7e-50
 Identities = 91/119 (76%), Positives = 105/119 (88%)
 Frame = +1

Query: 1   RGMGRIKPSAGDSANGLVSNDLHSIHGFDFAEGLKSTVSEKDFVVVKMDIEGTEFDLVPR 180
           RGMGRI+P AG   +G    ++ S+  FDFAE LK TVSE+D+VV+KMD+EGTEFDL+PR
Sbjct: 370 RGMGRIRPMAGKKMSG----EVRSVPAFDFAEWLKRTVSEQDYVVMKMDVEGTEFDLIPR 425

Query: 181 LFETGAICLIDELFLECHYNRWQRCCPGERSPKYKNTYGQCLELFSSLRESGVLVHQWW 357
           LF+TGAICLIDELFLECHYNRWQ+CCPGERSPKY+NTY +CLELFSSLRESGVLVHQWW
Sbjct: 426 LFDTGAICLIDELFLECHYNRWQKCCPGERSPKYQNTYDECLELFSSLRESGVLVHQWW 484


>ref|XP_002526697.1| conserved hypothetical protein [Ricinus communis]
           gi|223533997|gb|EEF35719.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 488

 Score =  199 bits (507), Expect = 1e-49
 Identities = 90/123 (73%), Positives = 107/123 (86%), Gaps = 4/123 (3%)
 Frame = +1

Query: 1   RGMGRIKP----SAGDSANGLVSNDLHSIHGFDFAEGLKSTVSEKDFVVVKMDIEGTEFD 168
           RGMGRI+P    S+   ++G    ++ +I GFDFAE LK+TV+EKDFVV+KMD+EGTEFD
Sbjct: 366 RGMGRIQPVTSSSSSSESDGSFDGEVDTIRGFDFAEWLKNTVTEKDFVVMKMDVEGTEFD 425

Query: 169 LVPRLFETGAICLIDELFLECHYNRWQRCCPGERSPKYKNTYGQCLELFSSLRESGVLVH 348
           L+PRLFETGAICLIDE+FLECHYNRWQRCCPG+RS KY+ TYGQCL+LF+SLRESGVLVH
Sbjct: 426 LIPRLFETGAICLIDEIFLECHYNRWQRCCPGQRSSKYEKTYGQCLDLFTSLRESGVLVH 485

Query: 349 QWW 357
           QWW
Sbjct: 486 QWW 488


>gb|AFW71483.1| hypothetical protein ZEAMMB73_430632 [Zea mays]
          Length = 381

 Score =  198 bits (503), Expect = 4e-49
 Identities = 87/119 (73%), Positives = 105/119 (88%)
 Frame = +1

Query: 1   RGMGRIKPSAGDSANGLVSNDLHSIHGFDFAEGLKSTVSEKDFVVVKMDIEGTEFDLVPR 180
           RGMGRI+P+ G   NG    ++ S+  FDFAE L+ TV+E+D+VV+KMD+EGTEFDL+PR
Sbjct: 267 RGMGRIRPATGKKMNG----EVRSVPAFDFAEWLRQTVTEQDYVVMKMDVEGTEFDLIPR 322

Query: 181 LFETGAICLIDELFLECHYNRWQRCCPGERSPKYKNTYGQCLELFSSLRESGVLVHQWW 357
           LF+TGAICL+DELFLECHYNRWQ+CCPGERSPKY+NTY +CL+LFSSLRESGVLVHQWW
Sbjct: 323 LFDTGAICLVDELFLECHYNRWQKCCPGERSPKYENTYEECLDLFSSLRESGVLVHQWW 381


Top