BLASTX nr result

ID: Dioscorea21_contig00029003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029003
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA62579.1| TPA: cyclic nucleotide-gated ion channel 14 [Zea...   108   6e-22
ref|NP_001152538.1| LOC100286178 [Zea mays] gi|195657303|gb|ACG4...   108   6e-22
tpg|DAA62578.1| TPA: hypothetical protein ZEAMMB73_670792, parti...   106   2e-21
ref|XP_002460654.1| hypothetical protein SORBIDRAFT_02g032610 [S...   105   3e-21
ref|XP_003522943.1| PREDICTED: probable cyclic nucleotide-gated ...   100   9e-20

>tpg|DAA62579.1| TPA: cyclic nucleotide-gated ion channel 14 [Zea mays]
          Length = 739

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/99 (48%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
 Frame = -2

Query: 296 RFYPDEKQNSTKTMYQTPKSGGLLANRAGYITPAKSEVFQEDHEPWSKQILDPGSDLVLK 117
           R +PDE+QN +K++YQT ++    ANR     P K +V  E ++PW ++ILDPGS++VL+
Sbjct: 43  RIFPDERQNQSKSLYQTTRADRFGANRIDLKNPEKLKVLNESNKPWHQRILDPGSNIVLR 102

Query: 116 WNRVFLVSCLLALFIDPLYFFLPSI-DVGNDTICIKMDR 3
           WNRV+LV+CL ALFIDP +++LP I   GN + C+  D+
Sbjct: 103 WNRVYLVACLFALFIDPFFYYLPLIRQNGNGSSCVAKDQ 141


>ref|NP_001152538.1| LOC100286178 [Zea mays] gi|195657303|gb|ACG48119.1| cyclic
           nucleotide-gated ion channel 14 [Zea mays]
          Length = 715

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/99 (48%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
 Frame = -2

Query: 296 RFYPDEKQNSTKTMYQTPKSGGLLANRAGYITPAKSEVFQEDHEPWSKQILDPGSDLVLK 117
           R +PDE+QN +K++YQT ++    ANR     P K +V  E ++PW ++ILDPGS++VL+
Sbjct: 19  RIFPDERQNQSKSLYQTTRADRFGANRIDLKNPEKLKVLNESNKPWHQRILDPGSNIVLR 78

Query: 116 WNRVFLVSCLLALFIDPLYFFLPSI-DVGNDTICIKMDR 3
           WNRV+LV+CL ALFIDP +++LP I   GN + C+  D+
Sbjct: 79  WNRVYLVACLFALFIDPFFYYLPLIRQNGNGSSCVAKDQ 117


>tpg|DAA62578.1| TPA: hypothetical protein ZEAMMB73_670792, partial [Zea mays]
          Length = 202

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/97 (48%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
 Frame = -2

Query: 290 YPDEKQNSTKTMYQTPKSGGLLANRAGYITPAKSEVFQEDHEPWSKQILDPGSDLVLKWN 111
           +PDE+QN +K++YQT ++    ANR     P K +V  E ++PW ++ILDPGS++VL+WN
Sbjct: 2   FPDERQNQSKSLYQTTRADRFGANRIDLKNPEKLKVLNESNKPWHQRILDPGSNIVLRWN 61

Query: 110 RVFLVSCLLALFIDPLYFFLPSI-DVGNDTICIKMDR 3
           RV+LV+CL ALFIDP +++LP I   GN + C+  D+
Sbjct: 62  RVYLVACLFALFIDPFFYYLPLIRQNGNGSSCVAKDQ 98


>ref|XP_002460654.1| hypothetical protein SORBIDRAFT_02g032610 [Sorghum bicolor]
           gi|241924031|gb|EER97175.1| hypothetical protein
           SORBIDRAFT_02g032610 [Sorghum bicolor]
          Length = 713

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/99 (48%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
 Frame = -2

Query: 296 RFYPDEKQNSTKTMYQTPKSGGLLANRAGYITPAKSEVFQEDHEPWSKQILDPGSDLVLK 117
           R +PDE+QN +K +YQT ++    ANR     P K +V  E ++PW ++ILDPGS++VL+
Sbjct: 19  RIFPDERQNQSKPLYQTARADRFGANRMDLKNPEKLKVLNEGNKPWHQRILDPGSNIVLR 78

Query: 116 WNRVFLVSCLLALFIDPLYFFLPSI-DVGNDTICIKMDR 3
           WNRV+LV+CL ALFIDP +++LP I   GN + C+  D+
Sbjct: 79  WNRVYLVACLFALFIDPFFYYLPLIRKNGNVSSCVAKDQ 117


>ref|XP_003522943.1| PREDICTED: probable cyclic nucleotide-gated ion channel 17-like
           [Glycine max]
          Length = 713

 Score =  100 bits (250), Expect = 9e-20
 Identities = 42/62 (67%), Positives = 53/62 (85%)
 Frame = -2

Query: 191 SEVFQEDHEPWSKQILDPGSDLVLKWNRVFLVSCLLALFIDPLYFFLPSIDVGNDTICIK 12
           S+VF EDHEPW K+ILDPGSD+VLKWNRVF+VSCL+ALF+DPLYF+LPS+     + C++
Sbjct: 55  SKVFPEDHEPWRKRILDPGSDIVLKWNRVFIVSCLVALFVDPLYFYLPSVIENTGSTCVR 114

Query: 11  MD 6
            D
Sbjct: 115 TD 116


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