BLASTX nr result
ID: Dioscorea21_contig00028961
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00028961
(308 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002309529.1| predicted protein [Populus trichocarpa] gi|2... 119 3e-25
ref|XP_002336031.1| predicted protein [Populus trichocarpa] gi|2... 119 3e-25
ref|XP_002324752.1| predicted protein [Populus trichocarpa] gi|2... 117 1e-24
ref|XP_002516533.1| serine-threonine protein kinase, plant-type,... 114 1e-23
emb|CBI27997.3| unnamed protein product [Vitis vinifera] 107 1e-21
>ref|XP_002309529.1| predicted protein [Populus trichocarpa] gi|222855505|gb|EEE93052.1|
predicted protein [Populus trichocarpa]
Length = 1014
Score = 119 bits (298), Expect = 3e-25
Identities = 56/102 (54%), Positives = 73/102 (71%)
Frame = +1
Query: 1 GKHSKLWNFDVSDNRISGELPVGLCTGGVLTSLVASDNNLTGRLPESLCACPKLDNIQVY 180
G SKL FDV+ N+ SG+LP LC GGVL VA +NNL+GR+P+SL C L IQ+Y
Sbjct: 358 GLSSKLVEFDVAANQFSGQLPENLCAGGVLLGAVAFENNLSGRVPQSLGNCNSLHTIQLY 417
Query: 181 SNSLTGDIPAGMWLAVNLTTVMMNDNQLSGTLPEKVPWKISR 306
SNS +G+IPAG+W A N+T +M++DN SG LP K+ W +SR
Sbjct: 418 SNSFSGEIPAGVWTASNMTYLMLSDNSFSGGLPSKLAWNLSR 459
Score = 54.7 bits (130), Expect = 8e-06
Identities = 31/91 (34%), Positives = 49/91 (53%)
Frame = +1
Query: 16 LWNFDVSDNRISGELPVGLCTGGVLTSLVASDNNLTGRLPESLCACPKLDNIQVYSNSLT 195
L D++ N+++G +P L L DN+L+G +P S+ P L +V+SN+L+
Sbjct: 291 LVEIDLAMNQLNGSIPKDFGKLKKLQFLSLLDNHLSGEVPPSIGLLPALTTFKVFSNNLS 350
Query: 196 GDIPAGMWLAVNLTTVMMNDNQLSGTLPEKV 288
G +P M L+ L + NQ SG LPE +
Sbjct: 351 GALPPKMGLSSKLVEFDVAANQFSGQLPENL 381
>ref|XP_002336031.1| predicted protein [Populus trichocarpa] gi|222838987|gb|EEE77338.1|
predicted protein [Populus trichocarpa]
Length = 1014
Score = 119 bits (298), Expect = 3e-25
Identities = 56/102 (54%), Positives = 73/102 (71%)
Frame = +1
Query: 1 GKHSKLWNFDVSDNRISGELPVGLCTGGVLTSLVASDNNLTGRLPESLCACPKLDNIQVY 180
G SKL FDV+ N+ SG+LP LC GGVL VA +NNL+GR+P+SL C L IQ+Y
Sbjct: 358 GLSSKLVEFDVAANQFSGQLPENLCAGGVLLGAVAFENNLSGRVPQSLGNCNSLHTIQLY 417
Query: 181 SNSLTGDIPAGMWLAVNLTTVMMNDNQLSGTLPEKVPWKISR 306
SNS +G+IPAG+W A N+T +M++DN SG LP K+ W +SR
Sbjct: 418 SNSFSGEIPAGVWTASNMTYLMLSDNSFSGGLPSKLAWNLSR 459
Score = 54.7 bits (130), Expect = 8e-06
Identities = 31/91 (34%), Positives = 49/91 (53%)
Frame = +1
Query: 16 LWNFDVSDNRISGELPVGLCTGGVLTSLVASDNNLTGRLPESLCACPKLDNIQVYSNSLT 195
L D++ N+++G +P L L DN+L+G +P S+ P L +V+SN+L+
Sbjct: 291 LVEIDLAMNQLNGSIPKDFGKLKKLQFLSLLDNHLSGEVPPSIGLLPALTTFKVFSNNLS 350
Query: 196 GDIPAGMWLAVNLTTVMMNDNQLSGTLPEKV 288
G +P M L+ L + NQ SG LPE +
Sbjct: 351 GALPPKMGLSSKLVEFDVAANQFSGQLPENL 381
>ref|XP_002324752.1| predicted protein [Populus trichocarpa] gi|222866186|gb|EEF03317.1|
predicted protein [Populus trichocarpa]
Length = 1019
Score = 117 bits (293), Expect = 1e-24
Identities = 53/102 (51%), Positives = 73/102 (71%)
Frame = +1
Query: 1 GKHSKLWNFDVSDNRISGELPVGLCTGGVLTSLVASDNNLTGRLPESLCACPKLDNIQVY 180
G HS L FDVS+N+ SG LP LC GGVL VA +NNL+G++P+SL C L +Q+Y
Sbjct: 351 GLHSTLEEFDVSNNQFSGRLPENLCAGGVLQGAVAFENNLSGQVPQSLGNCNSLRTVQLY 410
Query: 181 SNSLTGDIPAGMWLAVNLTTVMMNDNQLSGTLPEKVPWKISR 306
SN+ +G+IPAG+W A N+T +M+++N SG LP K+ W +SR
Sbjct: 411 SNNFSGEIPAGIWTAFNMTYLMLSENSFSGGLPSKLAWNLSR 452
>ref|XP_002516533.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis] gi|223544353|gb|EEF45874.1| serine-threonine
protein kinase, plant-type, putative [Ricinus communis]
Length = 1026
Score = 114 bits (284), Expect = 1e-23
Identities = 50/102 (49%), Positives = 70/102 (68%)
Frame = +1
Query: 1 GKHSKLWNFDVSDNRISGELPVGLCTGGVLTSLVASDNNLTGRLPESLCACPKLDNIQVY 180
G HSKL F+VS N SG+LP LC GGVL +VA NNLTG +P+SL C L +Q+Y
Sbjct: 359 GLHSKLQYFEVSTNHFSGKLPENLCAGGVLEGVVAFSNNLTGEVPQSLGKCNSLKTVQLY 418
Query: 181 SNSLTGDIPAGMWLAVNLTTVMMNDNQLSGTLPEKVPWKISR 306
+N +G+IP+G+W +N+T +M+++N SG LP + W +SR
Sbjct: 419 NNRFSGEIPSGIWTVINMTYLMLSNNSFSGKLPSSLAWNLSR 460
Score = 57.4 bits (137), Expect = 1e-06
Identities = 32/81 (39%), Positives = 44/81 (54%)
Frame = +1
Query: 46 ISGELPVGLCTGGVLTSLVASDNNLTGRLPESLCACPKLDNIQVYSNSLTGDIPAGMWLA 225
+ +PV LT L D NL G +PESL L+ + + N L G IP G++L
Sbjct: 207 VPSRIPVEFGNLTKLTFLWIRDANLIGSIPESLANLSSLETLDLSINKLEGSIPDGLFLL 266
Query: 226 VNLTTVMMNDNQLSGTLPEKV 288
NLT + + NQLSG +P+KV
Sbjct: 267 KNLTYLYLFHNQLSGDMPKKV 287
Score = 57.0 bits (136), Expect = 2e-06
Identities = 28/87 (32%), Positives = 51/87 (58%)
Frame = +1
Query: 25 FDVSDNRISGELPVGLCTGGVLTSLVASDNNLTGRLPESLCACPKLDNIQVYSNSLTGDI 204
F+ S+N +SGE+PV + + L +L+ N L G+LP + + L+ + + N+L+G I
Sbjct: 485 FEASNNLLSGEIPVEVTSLSHLNTLLLDGNQLLGQLPSKIISWKTLNTLNLSRNALSGQI 544
Query: 205 PAGMWLAVNLTTVMMNDNQLSGTLPEK 285
PA + +L + ++ N LSG +P +
Sbjct: 545 PAAIGSLPDLLYLDLSQNHLSGQIPSE 571
Score = 56.6 bits (135), Expect = 2e-06
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 25/124 (20%)
Frame = +1
Query: 1 GKHSKLWNFDVSDNRISGELPVGLCTGGVLTSLVASDNNLTGRLPESLCACPKLDNIQVY 180
GK + L + +NR SGE+P G+ T +T L+ S+N+ +G+LP SL L +++
Sbjct: 407 GKCNSLKTVQLYNNRFSGEIPSGIWTVINMTYLMLSNNSFSGKLPSSLAW--NLSRLELS 464
Query: 181 SNSLTGDIPAGMWLAVNLT------------------------TVMMNDNQLSGTLPEK- 285
+N +G IP G+ VNL T++++ NQL G LP K
Sbjct: 465 NNKFSGPIPTGISSWVNLVVFEASNNLLSGEIPVEVTSLSHLNTLLLDGNQLLGQLPSKI 524
Query: 286 VPWK 297
+ WK
Sbjct: 525 ISWK 528
>emb|CBI27997.3| unnamed protein product [Vitis vinifera]
Length = 750
Score = 107 bits (266), Expect = 1e-21
Identities = 47/102 (46%), Positives = 70/102 (68%)
Frame = +1
Query: 1 GKHSKLWNFDVSDNRISGELPVGLCTGGVLTSLVASDNNLTGRLPESLCACPKLDNIQVY 180
G++S L F+V+ N +G LP LC GG L LVA DN L+G LPESL C L + VY
Sbjct: 158 GRYSMLEAFEVASNSFTGRLPENLCAGGKLEGLVAFDNKLSGELPESLGNCRNLKTVMVY 217
Query: 181 SNSLTGDIPAGMWLAVNLTTVMMNDNQLSGTLPEKVPWKISR 306
+NSL+G++P+G+W VN++ +M++ N +G LP+++ W +SR
Sbjct: 218 NNSLSGNVPSGLWTLVNISRLMLSHNSFTGELPDELGWNLSR 259