BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028952
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi...    69   6e-10
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...    69   1e-09
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l...    66   5e-09
ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containi...    63   4e-08
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar...    63   4e-08

>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
            [Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
            protein product [Vitis vinifera]
          Length = 878

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 30/65 (46%), Positives = 41/65 (63%)
 Frame = +1

Query: 46   SRYNQNESHLKHLKQDSAPGGDWHNLLHRDDGGGIALKVLKRVQKGWGHGSVRHPQRWQL 225
            ++  +NES     K++   G DW  ++HRDDG G+ALK LKRVQKGWG GS+   Q  + 
Sbjct: 809  NKITRNESAFNRQKRNKFSGSDWQTIIHRDDGSGLALKALKRVQKGWGQGSISSLQPQKN 868

Query: 226  DLYDH 240
            D  D+
Sbjct: 869  DFLDY 873


>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 33/68 (48%), Positives = 43/68 (63%)
 Frame = +1

Query: 52   YNQNESHLKHLKQDSAPGGDWHNLLHRDDGGGIALKVLKRVQKGWGHGSVRHPQRWQLDL 231
            Y   + H+   K   A G DW  ++HRDDG GIALK LKRVQKGWG GS+   Q  +L+ 
Sbjct: 808  YPNVKGHILRNKNKDA-GNDWPIIVHRDDGSGIALKALKRVQKGWGQGSISSLQPQKLEF 866

Query: 232  YDHRDDAG 255
            +D+ D +G
Sbjct: 867  FDYWDGSG 874


>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 874

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 29/70 (41%), Positives = 43/70 (61%)
 Frame = +1

Query: 46   SRYNQNESHLKHLKQDSAPGGDWHNLLHRDDGGGIALKVLKRVQKGWGHGSVRHPQRWQL 225
            ++ + N + +   K +   G +W N+LHRDDG GIALK L RV+KGWG G +   Q  ++
Sbjct: 805  NKVDPNATDIHQKKHNKYSGNNWQNILHRDDGSGIALKSLSRVKKGWGQGDISSFQPQRV 864

Query: 226  DLYDHRDDAG 255
            D  D+ +D G
Sbjct: 865  DYLDYWEDDG 874


>ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/51 (54%), Positives = 35/51 (68%)
 Frame = +1

Query: 103 GGDWHNLLHRDDGGGIALKVLKRVQKGWGHGSVRHPQRWQLDLYDHRDDAG 255
           G DW ++++RD G GIALK LKRVQKGWG GS+   Q  Q D  D+ D +G
Sbjct: 825 GSDWQDIINRDAGSGIALKTLKRVQKGWGQGSISSLQPQQNDFLDYYDGSG 875


>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|330251496|gb|AEC06590.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/70 (40%), Positives = 42/70 (60%)
 Frame = +1

Query: 46   SRYNQNESHLKHLKQDSAPGGDWHNLLHRDDGGGIALKVLKRVQKGWGHGSVRHPQRWQL 225
            ++ + N   +   K +   G +W N+LHRDDG GIAL+ L RV+KGWG G +   Q  ++
Sbjct: 805  NKVDPNARDIHQKKHNKNGGNNWQNILHRDDGSGIALRSLSRVKKGWGQGDISSFQPPRV 864

Query: 226  DLYDHRDDAG 255
            D  D+ +D G
Sbjct: 865  DYLDYWEDDG 874