BLASTX nr result

ID: Dioscorea21_contig00028260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028260
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003566453.1| PREDICTED: ABC transporter C family member 8...   166   1e-39
ref|XP_003563749.1| PREDICTED: ABC transporter C family member 8...   166   2e-39
ref|XP_003563750.1| PREDICTED: ABC transporter C family member 8...   163   1e-38
ref|XP_002439417.1| hypothetical protein SORBIDRAFT_09g006080 [S...   162   2e-38
gb|AFW86663.1| hypothetical protein ZEAMMB73_389015 [Zea mays]        161   6e-38

>ref|XP_003566453.1| PREDICTED: ABC transporter C family member 8-like [Brachypodium
            distachyon]
          Length = 1574

 Score =  166 bits (421), Expect = 1e-39
 Identities = 81/117 (69%), Positives = 90/117 (76%)
 Frame = -3

Query: 353  PGFVGXXXXXXXXXXXXXAFTTRWYSGLENYIISVERIKQFMHLDSEPPAVISDRRPPPS 174
            PGF+G              F TR+YS LEN IISVERIKQFMHL SEPPAVISD+RPPPS
Sbjct: 1267 PGFLGLCLSYALTLSSAQVFLTRFYSNLENSIISVERIKQFMHLPSEPPAVISDKRPPPS 1326

Query: 173  WPHEGSIDFQELKVKYRPNAPYVLKGITCRIMAGNKVGVVGRTGSGKTTLVGALFRL 3
            WP EG ID + L+VKYRPN+P VL+GITC   AGNK+GVVGRTGSGKTTL+ ALFRL
Sbjct: 1327 WPSEGRIDLENLRVKYRPNSPTVLRGITCTFAAGNKIGVVGRTGSGKTTLLSALFRL 1383


>ref|XP_003563749.1| PREDICTED: ABC transporter C family member 8-like [Brachypodium
            distachyon]
          Length = 1469

 Score =  166 bits (419), Expect = 2e-39
 Identities = 79/117 (67%), Positives = 88/117 (75%)
 Frame = -3

Query: 353  PGFVGXXXXXXXXXXXXXAFTTRWYSGLENYIISVERIKQFMHLDSEPPAVISDRRPPPS 174
            PGF G              F TR+YS LENYIISVERIKQ+MHL SEPPA+I D RPP S
Sbjct: 1158 PGFAGLCLSYALTLTSAQVFLTRFYSYLENYIISVERIKQYMHLQSEPPAIIPDNRPPTS 1217

Query: 173  WPHEGSIDFQELKVKYRPNAPYVLKGITCRIMAGNKVGVVGRTGSGKTTLVGALFRL 3
            WPHEG ID Q+LKVKYRPN P VLKGITC   AGN++GVVGRTGSGK+TL+ +LFRL
Sbjct: 1218 WPHEGRIDLQDLKVKYRPNTPLVLKGITCTFPAGNRIGVVGRTGSGKSTLISSLFRL 1274


>ref|XP_003563750.1| PREDICTED: ABC transporter C family member 8-like [Brachypodium
            distachyon]
          Length = 1458

 Score =  163 bits (413), Expect = 1e-38
 Identities = 78/117 (66%), Positives = 88/117 (75%)
 Frame = -3

Query: 353  PGFVGXXXXXXXXXXXXXAFTTRWYSGLENYIISVERIKQFMHLDSEPPAVISDRRPPPS 174
            PGF G              F TR+YS LENYIISVERIKQ+MHL SEPPA+I D RPP S
Sbjct: 1147 PGFAGLCLSYALTLTSTQVFLTRFYSYLENYIISVERIKQYMHLQSEPPAIIPDNRPPTS 1206

Query: 173  WPHEGSIDFQELKVKYRPNAPYVLKGITCRIMAGNKVGVVGRTGSGKTTLVGALFRL 3
            WP+EG ID Q+LKVKYRPN P VLKGITC   AGN++GVVGRTGSGK+TL+ +LFRL
Sbjct: 1207 WPNEGKIDLQDLKVKYRPNTPLVLKGITCTFPAGNRIGVVGRTGSGKSTLISSLFRL 1263


>ref|XP_002439417.1| hypothetical protein SORBIDRAFT_09g006080 [Sorghum bicolor]
            gi|241944702|gb|EES17847.1| hypothetical protein
            SORBIDRAFT_09g006080 [Sorghum bicolor]
          Length = 1312

 Score =  162 bits (411), Expect = 2e-38
 Identities = 80/117 (68%), Positives = 86/117 (73%)
 Frame = -3

Query: 353  PGFVGXXXXXXXXXXXXXAFTTRWYSGLENYIISVERIKQFMHLDSEPPAVISDRRPPPS 174
            PGF+G              F TR+YS LENYIISVERI QFMHL  EPPAVI DRRPPPS
Sbjct: 1005 PGFLGLCLSYALTLSSAQVFLTRFYSNLENYIISVERIMQFMHLPEEPPAVIPDRRPPPS 1064

Query: 173  WPHEGSIDFQELKVKYRPNAPYVLKGITCRIMAGNKVGVVGRTGSGKTTLVGALFRL 3
            WP EG ID   L+VKYRP+AP VL GITC   AGNK+GVVGRTGSGKTTL+ ALFRL
Sbjct: 1065 WPSEGRIDLDNLRVKYRPDAPTVLHGITCTFAAGNKIGVVGRTGSGKTTLLSALFRL 1121


>gb|AFW86663.1| hypothetical protein ZEAMMB73_389015 [Zea mays]
          Length = 1451

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/117 (65%), Positives = 87/117 (74%)
 Frame = -3

Query: 353  PGFVGXXXXXXXXXXXXXAFTTRWYSGLENYIISVERIKQFMHLDSEPPAVISDRRPPPS 174
            PGF G              F TR+YS LENYIISVERIKQ+MHL  EPPA+I D RPP S
Sbjct: 1166 PGFAGLCLSYALTLTSAQIFLTRFYSYLENYIISVERIKQYMHLPVEPPAIIPDSRPPTS 1225

Query: 173  WPHEGSIDFQELKVKYRPNAPYVLKGITCRIMAGNKVGVVGRTGSGKTTLVGALFRL 3
            WP EG ID Q+LK++YRPNAP VLKGITC   AGNK+GVVGRTGSGK+TL+ +LFRL
Sbjct: 1226 WPQEGRIDLQDLKIRYRPNAPLVLKGITCTFAAGNKIGVVGRTGSGKSTLISSLFRL 1282


Top