BLASTX nr result

ID: Dioscorea21_contig00028084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028084
         (1829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617651.1| PHD finger protein [Medicago truncatula] gi|...   181   6e-43
ref|XP_003519600.1| PREDICTED: uncharacterized protein LOC100807...   175   4e-41
ref|XP_003545110.1| PREDICTED: uncharacterized protein LOC100783...   168   4e-39
ref|XP_002531205.1| conserved hypothetical protein [Ricinus comm...   166   3e-38
ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-36

>ref|XP_003617651.1| PHD finger protein [Medicago truncatula] gi|355518986|gb|AET00610.1|
            PHD finger protein [Medicago truncatula]
          Length = 874

 Score =  181 bits (459), Expect = 6e-43
 Identities = 135/435 (31%), Positives = 200/435 (45%), Gaps = 10/435 (2%)
 Frame = +3

Query: 3    EWHCPKCLISGNGKPLPPKYGRVTRXXXXXXXXXXXXIIGTQASTETKPETPDSKTNHQI 182
            +WHC KCL    GKPLPPKYGRV R              G Q S+E KP+  D K + Q+
Sbjct: 479  DWHCMKCLGLSGGKPLPPKYGRVMRSSITSPSFPSNSA-GIQPSSEKKPDNLDPKVSPQM 537

Query: 183  PNGNSSFLVHASTTGGNVGDAVPNLKTDETKEMQDMGF-----TIRTKMDDGMCI-GATS 344
               N + +   S+T  N   +  +  T +T+++Q         TI  K D  +C+  A  
Sbjct: 538  LTTNGNSVPTDSSTNHNTEPSFDS-NTPDTRDIQGSNISSSIETIDEKPDPNICVKSAAY 596

Query: 345  DHSKEVTGKGCANPGPDS--TCPDENIETTGSSPSKTQKPNSESMLQMKGEDSSNPHDEI 518
              S  V G+G A        TC D       +S S+T    SE  L   G   S+P  ++
Sbjct: 597  SASTGVQGEGYAEQIDSKALTCKD-------TSESETLPNISE--LAKSGNLQSSPGSQV 647

Query: 519  MEPDDIKCASNSNGIASQSLAVCDSQDNKLDVPINFEVSADLLPESSKANIDESEKPFKL 698
                        N +         SQDN        E+S+D     S + I  ++K    
Sbjct: 648  -----------ENAV---------SQDNA-------EISSDR--HDSSSFIISNQKESHE 678

Query: 699  SELSIVNADSEKSKDEVDANK-ETPSGALSNGDVTGVCVTPVSGPSIIDWVGDILEVAEE 875
             E +  +      +D++DA +  +  G+ +N +    C         ++W+GD++++ +E
Sbjct: 679  GESTTYDI----KRDDLDAAQPNSVRGSGTNTEGIQHCALSSDSSHAVEWIGDVVQLVDE 734

Query: 876  KNYYQACLIKGAVHKLQDHVMVSSNSQKAYPSKIQNLWEDNKAGLKLAIVIPYYFPADIP 1055
            K +YQ+C I G  ++LQ H   +S+  K  PSK+Q++WED+K G+K   V   YFP D+P
Sbjct: 735  KKHYQSCCIDGVTYRLQGHAFFTSSHGKLTPSKLQSMWEDSKTGVKWVKVTKCYFPDDLP 794

Query: 1056 EAVGCPSTPVDREVYASNKESTVMVQEILGTCEVLPLHKFKEECNNSSNLQATDNSS-HP 1232
              +G P      EVY SN +   M   I G C VLP  KFK+E +         ++S  P
Sbjct: 795  GNIGHPCISEVNEVYESNSDRVEMASSIRGPCVVLPYDKFKQENDRRCQFGVEASASVQP 854

Query: 1233 IFFCKWTYDESKGMF 1277
            IF C+W YDE K  F
Sbjct: 855  IFLCRWFYDEIKKSF 869


>ref|XP_003519600.1| PREDICTED: uncharacterized protein LOC100807139 [Glycine max]
          Length = 830

 Score =  175 bits (443), Expect = 4e-41
 Identities = 130/427 (30%), Positives = 189/427 (44%), Gaps = 2/427 (0%)
 Frame = +3

Query: 3    EWHCPKCLISGNGKPLPPKYGRVTRXXXXXXXXXXXXIIGTQASTETKPETPDSKTNHQI 182
            +WHC +CL    GKPLPPKYGRV R              G Q  +E K E  D K   Q 
Sbjct: 433  DWHCMRCLSLSGGKPLPPKYGRVMRSSNTPPKLPSNTG-GVQPCSEKKVENIDPKVIPQT 491

Query: 183  PNGNSSFLVHASTTGGNVGDAVPN-LKTDETKEMQDMGFTIRTKMDDGMCIGATSDHSKE 359
               N S +   + +GG+    +P+  K  +TK+MQ  G +   +      I    D    
Sbjct: 492  LATNGSSV--PTVSGGHHNVELPSESKIPDTKDMQGTGISSTIE-----AIDKKPDPKNS 544

Query: 360  VTGKGCANPGPDSTCPDENIETTGSSPSKTQKPNSESMLQMKGEDSSNPHDEIMEPDDIK 539
            +     A   P      EN     +S   T +  SES             + + +  ++ 
Sbjct: 545  MKSLSAAY-SPSPCLLGENSAQQINSKVLTGRETSES-------------ESLPKLSELA 590

Query: 540  CASNSNGIASQSLAVCDSQDNKLDVPINFEVSADLLPESSKANIDESEKPFKLSELSIVN 719
               N        +    SQDN        EVS+D   +S+  N  + E      E ++V 
Sbjct: 591  KCENLQSSQDFQVEHTMSQDNA-------EVSSDKHVDSNMMNNQQKESH---GEENLVY 640

Query: 720  ADSEKSKDEVDANKETPSGALSNGDVTGVCVTPVSGPSIIDWVGDILEVAEEKNYYQACL 899
                  +D    N    SG  ++G       +  S    ++W+GD++++ +EK YYQ+C 
Sbjct: 641  DIKRDDQDAALENSVGTSGTNTDGRQHSALSSDSS--HAVEWIGDVVQLVDEKKYYQSCC 698

Query: 900  IKGAVHKLQDHVMVSSNSQKAYPSKIQNLWEDNKAGLKLAIVIPYYFPADIPEAVGCPST 1079
            + G  ++LQ H +  +   K  PSK+Q++WED K GLK   V   YFP D+P  +G P  
Sbjct: 699  VDGVTYRLQGHALFPTGHGKLTPSKLQSMWEDCKTGLKWVKVTNCYFPDDLPGNIGHPCI 758

Query: 1080 PVDREVYASNKESTVMVQEILGTCEVLPLHKFKEECNNSSNLQATDNSS-HPIFFCKWTY 1256
                EVY SN + T M   I G CEVLP  KFK+E +    L+  ++S   PIF C+W Y
Sbjct: 759  SEVNEVYESNSDRTEMASSIRGPCEVLPSDKFKQENDRRCQLRNEESSRVQPIFLCRWFY 818

Query: 1257 DESKGMF 1277
            DE K +F
Sbjct: 819  DEFKKLF 825


>ref|XP_003545110.1| PREDICTED: uncharacterized protein LOC100783208 [Glycine max]
          Length = 830

 Score =  168 bits (426), Expect = 4e-39
 Identities = 129/439 (29%), Positives = 193/439 (43%), Gaps = 14/439 (3%)
 Frame = +3

Query: 3    EWHCPKCLISGNGKPLPPKYGRVTRXXXXXXXXXXXXIIGTQASTETKPETPDSKTNHQI 182
            +WHC +CL    GKPLPPKYGRV R                  S+ T P+ P        
Sbjct: 433  DWHCMRCLSLSGGKPLPPKYGRVMR------------------SSNTPPKLP-------- 466

Query: 183  PNGNSSFLVHASTTGGNVGDAVPNLKTDETKEMQDMGFTIRTKMDDGMCIGATSDHSKEV 362
                       S TGG +  +   ++  + K +     T  + +   +C G   +H+ E+
Sbjct: 467  -----------SNTGGILPCSEKKVENIDPKVIPQTLATNGSSVQT-VCGG---NHNVEL 511

Query: 363  TGKGCANPGPDSTCPDENIETTGSSPSKTQKPNSESMLQMKGEDSSNP---HDEIMEPDD 533
            + +       D      NI +T  +  K   PN+ SM  +    S +P       ++  +
Sbjct: 512  SSESRIPDTKDMQ--GTNISSTIEAIDKKPDPNN-SMKSLSAASSPSPCLLGKNSVQQIN 568

Query: 534  IKCASNSNGIASQSL------AVCDSQDNKLDVPINFEVSADLLPESSKANIDESEKPFK 695
             K  +    + S+SL      A C+   +  D  +   +S D    SS  ++D +    K
Sbjct: 569  SKVLTGKETLESESLPKLSEPAKCEDLQSSQDFQVEHTMSQDNPEVSSDKHVDHNIMNNK 628

Query: 696  LSEL----SIVNADSEKSKDEVDANKETPSGALSNGDVTGVCVTPVSGPSIIDWVGDILE 863
              E     S+        +D   AN    SG  +N D T            ++W+GD+++
Sbjct: 629  QKEFHGGKSLTYDIKLDDQDAALANFVGTSG--TNTDGTQHSALSSDSSHAVEWIGDVVQ 686

Query: 864  VAEEKNYYQACLIKGAVHKLQDHVMVSSNSQKAYPSKIQNLWEDNKAGLKLAIVIPYYFP 1043
            + +EK YYQ+C I G  ++LQ H +  ++  K  PSK+Q++WED K GLK   V   YFP
Sbjct: 687  LVDEKKYYQSCCIDGVTYRLQGHALFPTSHGKLTPSKLQSMWEDCKTGLKWVKVTNCYFP 746

Query: 1044 ADIPEAVGCPSTPVDREVYASNKESTVMVQEILGTCEVLPLHKFKEECNNSSNLQATDNS 1223
             D+P  +G P      EVY SN + T M   I G CEVLP  KFK+E +    L   + S
Sbjct: 747  DDLPGNIGHPCISEVNEVYESNGDRTEMANSIRGPCEVLPSDKFKQENDMRCQLGIEETS 806

Query: 1224 S-HPIFFCKWTYDESKGMF 1277
               PIF C+W YDE K +F
Sbjct: 807  KVQPIFLCRWFYDEFKKLF 825


>ref|XP_002531205.1| conserved hypothetical protein [Ricinus communis]
            gi|223529207|gb|EEF31182.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 892

 Score =  166 bits (419), Expect = 3e-38
 Identities = 137/449 (30%), Positives = 194/449 (43%), Gaps = 33/449 (7%)
 Frame = +3

Query: 3    EWHCPKCLISGNGKPLPPKYGRVTRXXXXXXXXXXXXIIGTQASTETKPETPDSKTNHQI 182
            EWHC +C    NGKPLPPKYGRV R              G Q S E K ET D K N + 
Sbjct: 449  EWHCLRCTALSNGKPLPPKYGRVMRSITPPKGPSNSG--GAQPSLEKKFETLDEKVNQEK 506

Query: 183  PNGNSSFLVHASTTGGNVGDAVPNLKTDETKEMQDMGFTIRTK-MDDGMCIGATSDHSKE 359
               N S  +      G V  A     +D  +E+         K MD GMC G  +  +  
Sbjct: 507  LTANGSSGLRNPAVSGTVTCAEST--SDLKREINGNSTPSSVKDMDQGMCAGPNNSTN-- 562

Query: 360  VTGKGCANPGPDSTCPDENIETTGSSPSKTQKPNSESMLQMKGEDSSNPHDEIMEPDDIK 539
                   + G  S  P   + ++GSS   TQ   S S +Q    D  +  +  ++   I 
Sbjct: 563  -------SLGAVSDYPSVGL-SSGSSIQLTQV--SGSCIQ----DERSVSESKLQSPAIL 608

Query: 540  CASNSNGIASQSLAVCDSQDNKLDVPINFEVSADLLPESSKAN---IDESEK-------- 686
            C + +N   +      +S  N  D+      S   +P  +  N   +DE E         
Sbjct: 609  CETITNKFENS-----ESSHNLQDINQRELSSTGEIPMKTSQNNCMVDELESIRGHSDCP 663

Query: 687  ---PFKLSELSIVNADSEKSKDEVDANKETPSGALSNGDVTGVCVTPVSGPSIIDWVGDI 857
                 K +E  I +A   KS    +AN +    A  N           +G   + W+G++
Sbjct: 664  STLDMKQNEQDIAHA---KSVGSSEANNKARMHAGMNS----------AGIHSVKWIGNV 710

Query: 858  LEVAEEKNYYQACLIKGAVHKLQDHVMVSSNSQKAYPSKIQN-----------------L 986
            L+VA+ K +Y +C + GA +K+QDH +  S+ +K  PSK+Q                  +
Sbjct: 711  LKVADGKTFYVSCSVGGATYKVQDHALFRSSHEKLIPSKLQASDMRVIPSYVYCSSLLAM 770

Query: 987  WEDNKAGLKLAIVIPYYFPADIPEAVGCPSTPVDREVYASNKESTVMVQEILGTCEVLPL 1166
            WED + G K  +V   YFP D+P+AVG P  P   EVY SN ES+++   I G C+VLP 
Sbjct: 771  WEDVETGSKWVLVRQCYFPGDLPKAVGHPCAPESNEVYESNHESSILADLIQGPCQVLPP 830

Query: 1167 HKFKEECNNSSNLQAT-DNSSHPIFFCKW 1250
             KF+E     S L     N S P+F CK+
Sbjct: 831  TKFQENAERRSQLGIEGKNESWPVFLCKY 859


>ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|222846100|gb|EEE83647.1|
            predicted protein [Populus trichocarpa]
          Length = 798

 Score =  160 bits (405), Expect = 1e-36
 Identities = 126/422 (29%), Positives = 187/422 (44%), Gaps = 1/422 (0%)
 Frame = +3

Query: 3    EWHCPKCLISGNGKPLPPKYGRVTRXXXXXXXXXXXXIIGTQASTETKPETPDSKTNHQI 182
            EWHC  C+   NGKPLPPKYGRV R              G+ +S E K E  D K + Q 
Sbjct: 437  EWHCRNCMALSNGKPLPPKYGRVMRSATPPKGPSNPA--GSHSSLEKKAENVDLKVDQQ- 493

Query: 183  PNGNSSFLVHASTTGGNVGDAVPNLKTDETKEMQDMGFTIRTKMDDGMCIGATSDHSKEV 362
                +    +A +   N  ++  + +    +EM   G T   K  D              
Sbjct: 494  -KSTNGVQNNAGSGSVNNVESASDSRISGEREMPRDGITSSGKDAD-------------- 538

Query: 363  TGKGCANPGPDSTCPDENIETTGSSPSKTQKPNSESMLQMKGEDSSNPHDEIMEPDDIKC 542
                       STC   N  T  S+    Q   SES  Q K   S +             
Sbjct: 539  ----------QSTCSFPNNSTERSTQ---QDQVSESPAQEKSSLSES------------- 572

Query: 543  ASNSNGIASQSLAVCDSQDNKLDVPINFEVSADLLPESSKANIDESEKPFKLSELSIVNA 722
                    S+ ++ C+  D+K   P++  +S D++ ++ ++N  ++       + SI+  
Sbjct: 573  --------SEKISKCE--DSK---PLH--ISQDII-QTEQSNFPKAPLT-PHQDHSIMEE 615

Query: 723  DSEKSKDEVDANKETPSGALSNGDVTGVCVTPVSGPSIIDWVGDILEVAEEKNYYQACLI 902
             +      V  N+      LS+           SG   ++W+G+ ++VA+ K +Y++C I
Sbjct: 616  SASVRGSSVPNNRVGKHPGLSS-----------SGIHSVEWIGNEIKVADGKTFYKSCCI 664

Query: 903  KGAVHKLQDHVMVSSNSQKAYPSKIQNLWEDNKAGLKLAIVIPYYFPADIPEAVGCPSTP 1082
             G  +K+QDH +  S+  K  PSK+Q +WE+ + G K  +V   YFP D+P AVG P  P
Sbjct: 665  DGVSYKVQDHALFHSSDGKLTPSKLQTMWEEIETGSKWVLVSQCYFPGDLPAAVGHPCAP 724

Query: 1083 VDREVYASNKESTVMVQEILGTCEVLPLHKFKEECNNSSNLQ-ATDNSSHPIFFCKWTYD 1259
               EVY SN ES+VM   I G CEVLP +KFKE     + L    +N S P+F CK  +D
Sbjct: 725  ESNEVYESNHESSVMASLIEGPCEVLPPNKFKEMSERQNRLAIEANNGSAPVFICKELHD 784

Query: 1260 ES 1265
             S
Sbjct: 785  MS 786


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