BLASTX nr result

ID: Dioscorea21_contig00027998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027998
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266524.2| PREDICTED: superkiller viralicidic activity ...    45   4e-06
ref|XP_002883745.1| HUA enhancer 2 [Arabidopsis lyrata subsp. ly...    45   4e-06
ref|XP_003525319.1| PREDICTED: LOW QUALITY PROTEIN: superkiller ...    45   4e-06
ref|XP_003530466.1| PREDICTED: superkiller viralicidic activity ...    45   4e-06
ref|XP_002531387.1| helicase, putative [Ricinus communis] gi|223...    45   4e-06

>ref|XP_002266524.2| PREDICTED: superkiller viralicidic activity 2-like 2-like [Vitis
           vinifera]
          Length = 995

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = -3

Query: 231 GHINANGVIQLMVHVTCLIDSGDKLLVTELI 139
           GHI+A+GV+QL     CLID+GD+LLVTEL+
Sbjct: 814 GHIDADGVVQLKGRAACLIDTGDELLVTELM 844



 Score = 30.0 bits (66), Expect(2) = 4e-06
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 38  GTFNDIDHHQVA 3
           GTFND+DHHQVA
Sbjct: 847 GTFNDLDHHQVA 858


>ref|XP_002883745.1| HUA enhancer 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297329585|gb|EFH60004.1| HUA enhancer 2 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 984

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = -3

Query: 231 GHINANGVIQLMVHVTCLIDSGDKLLVTELI 139
           GHI+A+GV+QL     CLID+GD+LLVTEL+
Sbjct: 803 GHIDADGVVQLKGRAACLIDTGDELLVTELM 833



 Score = 30.0 bits (66), Expect(2) = 4e-06
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 38  GTFNDIDHHQVA 3
           GTFND+DHHQVA
Sbjct: 836 GTFNDLDHHQVA 847


>ref|XP_003525319.1| PREDICTED: LOW QUALITY PROTEIN: superkiller viralicidic activity
           2-like 2-like [Glycine max]
          Length = 982

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = -3

Query: 231 GHINANGVIQLMVHVTCLIDSGDKLLVTELI 139
           GHI+A+GV+QL     CLID+GD+LLVTEL+
Sbjct: 801 GHIDADGVVQLKGRAACLIDTGDELLVTELM 831



 Score = 30.0 bits (66), Expect(2) = 4e-06
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 38  GTFNDIDHHQVA 3
           GTFND+DHHQVA
Sbjct: 834 GTFNDLDHHQVA 845


>ref|XP_003530466.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Glycine
           max]
          Length = 976

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = -3

Query: 231 GHINANGVIQLMVHVTCLIDSGDKLLVTELI 139
           GHI+A+GV+QL     CLID+GD+LLVTEL+
Sbjct: 795 GHIDADGVVQLKGRAACLIDTGDELLVTELM 825



 Score = 30.0 bits (66), Expect(2) = 4e-06
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 38  GTFNDIDHHQVA 3
           GTFND+DHHQVA
Sbjct: 828 GTFNDLDHHQVA 839


>ref|XP_002531387.1| helicase, putative [Ricinus communis] gi|223529017|gb|EEF31007.1|
           helicase, putative [Ricinus communis]
          Length = 962

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = -3

Query: 231 GHINANGVIQLMVHVTCLIDSGDKLLVTELI 139
           GHI+A+GV+QL     CLID+GD+LLVTEL+
Sbjct: 806 GHIDADGVVQLKGRAACLIDTGDELLVTELM 836



 Score = 30.0 bits (66), Expect(2) = 4e-06
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 38  GTFNDIDHHQVA 3
           GTFND+DHHQVA
Sbjct: 839 GTFNDLDHHQVA 850


Top