BLASTX nr result

ID: Dioscorea21_contig00027938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027938
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133825.1| PREDICTED: F-box/kelch-repeat protein At3g61...    63   2e-08
ref|NP_001046481.1| Os02g0260200 [Oryza sativa Japonica Group] g...    62   5e-08
dbj|BAD20077.1| F-box-like protein [Oryza sativa Japonica Group]...    62   5e-08
gb|ADQ13183.1| LP [Oryza sativa Japonica Group]                        62   5e-08
gb|ADN34172.1| F-box family protein [Cucumis melo subsp. melo]         62   6e-08

>ref|XP_004133825.1| PREDICTED: F-box/kelch-repeat protein At3g61590-like [Cucumis
           sativus] gi|449480293|ref|XP_004155853.1| PREDICTED:
           F-box/kelch-repeat protein At3g61590-like [Cucumis
           sativus]
          Length = 405

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
 Frame = +2

Query: 83  MDGETSWESHSYTSWESHAVSQQACEAADYQTGLEIHGRNDGG---LRISLEAILPDDIL 253
           M+G+TSW  H +T            +  D+ + L+    N+GG   + +S+E+ILPDD+L
Sbjct: 1   MEGQTSWIRHCHTDMSR--------DLEDFDSYLDF--TNEGGKEAVAVSVESILPDDLL 50

Query: 254 EKIFSFMPIACVVRLASVCSRWYRV 328
           E+I S++PIA + R  SVC RW+ +
Sbjct: 51  ERILSYLPIASIFRAGSVCKRWHDI 75


>ref|NP_001046481.1| Os02g0260200 [Oryza sativa Japonica Group]
           gi|113536012|dbj|BAF08395.1| Os02g0260200 [Oryza sativa
           Japonica Group]
          Length = 408

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +2

Query: 125 WESHAVSQQACEAADY-QTGLEIHGRNDGGLRISLEAILPDDILEKIFSFMPIACVVRLA 301
           WE +  S    +  DY     ++     G L +S++A+LPDD+LEK+ SF+P+A V+R  
Sbjct: 9   WELYPSSFIGAQVIDYGHVSGDMDDDQSGDLAVSMDAVLPDDLLEKVLSFLPVASVIRSG 68

Query: 302 SVCSRWYRV 328
           SVC RW+ +
Sbjct: 69  SVCKRWHEI 77


>dbj|BAD20077.1| F-box-like protein [Oryza sativa Japonica Group]
           gi|47497917|dbj|BAD20123.1| F-box-like protein [Oryza
           sativa Japonica Group] gi|125538877|gb|EAY85272.1|
           hypothetical protein OsI_06642 [Oryza sativa Indica
           Group] gi|125581549|gb|EAZ22480.1| hypothetical protein
           OsJ_06146 [Oryza sativa Japonica Group]
          Length = 405

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +2

Query: 125 WESHAVSQQACEAADY-QTGLEIHGRNDGGLRISLEAILPDDILEKIFSFMPIACVVRLA 301
           WE +  S    +  DY     ++     G L +S++A+LPDD+LEK+ SF+P+A V+R  
Sbjct: 6   WELYPSSFIGAQVIDYGHVSGDMDDDQSGDLAVSMDAVLPDDLLEKVLSFLPVASVIRSG 65

Query: 302 SVCSRWYRV 328
           SVC RW+ +
Sbjct: 66  SVCKRWHEI 74


>gb|ADQ13183.1| LP [Oryza sativa Japonica Group]
          Length = 515

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +2

Query: 125 WESHAVSQQACEAADY-QTGLEIHGRNDGGLRISLEAILPDDILEKIFSFMPIACVVRLA 301
           WE +  S    +  DY     ++     G L +S++A+LPDD+LEK+ SF+P+A V+R  
Sbjct: 116 WELYPSSFIGAQVIDYGHVSGDMDDDQSGDLAVSMDAVLPDDLLEKVLSFLPVASVIRSG 175

Query: 302 SVCSRWYRV 328
           SVC RW+ +
Sbjct: 176 SVCKRWHEI 184


>gb|ADN34172.1| F-box family protein [Cucumis melo subsp. melo]
          Length = 405

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
 Frame = +2

Query: 119 TSWESHAVSQQACEAADYQTGLEIHGRNDGG---LRISLEAILPDDILEKIFSFMPIACV 289
           TSW  H  +  + +  D+ + L+    N+GG   + +S+E+ILPDD+LE+I S++PIA +
Sbjct: 5   TSWIRHCHTDMSRDLEDFDSYLDF--TNEGGEEAVAVSVESILPDDLLERILSYLPIASI 62

Query: 290 VRLASVCSRWYRV 328
            R  SVC RW+ +
Sbjct: 63  FRAGSVCKRWHDI 75


Top