BLASTX nr result

ID: Dioscorea21_contig00027921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027921
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525583.1| hypothetical protein RCOM_0622510 [Ricinus c...    65   2e-08
ref|XP_003591130.1| DNA (cytosine-5)-methyltransferase 3B [Medic...    57   7e-06

>ref|XP_002525583.1| hypothetical protein RCOM_0622510 [Ricinus communis]
           gi|223535162|gb|EEF36842.1| hypothetical protein
           RCOM_0622510 [Ricinus communis]
          Length = 701

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
 Frame = +2

Query: 2   PYRWWPGSITRIISSSALVSFFG-CDKARCFDFP-EIRGFEEAYPWISKMVRVKLSDE-- 169
           P +WWPG +  I      VSFF   +   C+    E+  F+E +  + K ++     E  
Sbjct: 18  PRKWWPGLVLSIKGHWVAVSFFNDIEDGPCYFLETEVCSFQENFESLVKTIQNCSKGEKL 77

Query: 170 IGLALEELNRQSTLGMICSCRSMDRKLNQCVEEKKGFEPKEMLGFLLDVAIDVSASVCNL 349
           +  AL+ ++R+    + CSC     + N+ V +K  FE   +LGF+LDVA+     V +L
Sbjct: 78  LDFALKLISRRVYSSLKCSCHFFTPRKNRDVLKKDLFESNLVLGFVLDVAVSPFIGVSDL 137

Query: 350 ATAVRLSAQLVAHRHYV 400
             AV L+A++ A R YV
Sbjct: 138 VYAVTLAAKINAFRSYV 154


>ref|XP_003591130.1| DNA (cytosine-5)-methyltransferase 3B [Medicago truncatula]
           gi|355480178|gb|AES61381.1| DNA
           (cytosine-5)-methyltransferase 3B [Medicago truncatula]
          Length = 722

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 34/138 (24%)
 Frame = +2

Query: 11  WWPGSITR--IISSSA---------LVSFFGCDKARCFDFPEIRGFEEAYPWISKMVRVK 157
           WWPG I      SSSA         LV+FFG    R FD  ++  F+E +   SK V++K
Sbjct: 89  WWPGYICNEAFASSSARLGKKEGCVLVAFFGDGSYRWFDPVQLIPFDENFAEKSKQVKLK 148

Query: 158 -LSDEIGLALEELNRQSTLGMICSCRSMDR----------------------KLNQCVEE 268
             S+ +  ++EE  R+  +G++C CRS +                        + Q    
Sbjct: 149 SFSNAVEESVEEAGRRCAIGLMCRCRSFENFRPTEVEGYFRVHVPDYDSGIYSVAQIRNA 208

Query: 269 KKGFEPKEMLGFLLDVAI 322
           KKGF P E L F+  +A+
Sbjct: 209 KKGFRPAETLAFIKKLAV 226


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