BLASTX nr result

ID: Dioscorea21_contig00027905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027905
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]    124   6e-27
gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo]    124   6e-27
gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...   115   5e-24
ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] g...   115   5e-24
ref|XP_004154396.1| PREDICTED: uncharacterized protein LOC101203...   112   2e-23

>gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]
          Length = 871

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
 Frame = +2

Query: 17  LGEFCRYTPPTFEEST-DPTVAEFWVNQIEITFRAMQSPEEEKVRLATFMLRDRASKWYE 193
           L +F +Y P TF+ S  DPT A+ W++ +E  FR M+ PE++KV+ A FML DR + W+E
Sbjct: 332 LRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWE 391

Query: 194 NERRRKGEDAFR-TWKQFKEAFYAKYFPFSRRSQLERQFLNLKQGSLTVEDYEAEFDRLS 370
              R  G D  + TW+QFKE+FYAK+F  S R    ++FLNL+QG +TVE Y+AEFD LS
Sbjct: 392 TTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS 451

Query: 371 HF 376
            F
Sbjct: 452 RF 453


>gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo]
          Length = 429

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
 Frame = +2

Query: 17  LGEFCRYTPPTFEEST-DPTVAEFWVNQIEITFRAMQSPEEEKVRLATFMLRDRASKWYE 193
           L +F +Y P TF+ S  DPT A+ W++ +E  FR M+ PE++KV+ A FML DR + W+E
Sbjct: 60  LRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWE 119

Query: 194 NERRRKGEDAFR-TWKQFKEAFYAKYFPFSRRSQLERQFLNLKQGSLTVEDYEAEFDRLS 370
              R  G D  + TW+QFKE+FYAK+F  S R    ++FLNL+QG +TVE Y+AEFD LS
Sbjct: 120 TTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS 179

Query: 371 HF 376
            F
Sbjct: 180 RF 181


>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
           gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
           kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
           Group] gi|31431495|gb|AAP53268.1| retrotransposon
           protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1230

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/124 (44%), Positives = 81/124 (65%)
 Frame = +2

Query: 5   SRDLLGEFCRYTPPTFEESTDPTVAEFWVNQIEITFRAMQSPEEEKVRLATFMLRDRASK 184
           +R+ LGEF +  PPTF  + +P  AE W+  +E +F AM   ++EK+  AT+ML+  A +
Sbjct: 67  NRNGLGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFE 126

Query: 185 WYENERRRKGEDAFRTWKQFKEAFYAKYFPFSRRSQLERQFLNLKQGSLTVEDYEAEFDR 364
           W++  ++   E  F TW+ FKEAFY KYFP S +   E++FL LKQG+ +V +YE EF R
Sbjct: 127 WWDAHKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAEYEIEFSR 186

Query: 365 LSHF 376
           L+ F
Sbjct: 187 LARF 190


>ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group]
           gi|255679330|dbj|BAH94833.1| Os10g0357350 [Oryza sativa
           Japonica Group]
          Length = 443

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/124 (44%), Positives = 81/124 (65%)
 Frame = +2

Query: 5   SRDLLGEFCRYTPPTFEESTDPTVAEFWVNQIEITFRAMQSPEEEKVRLATFMLRDRASK 184
           +R+ LGEF +  PPTF  + +P  AE W+  +E +F AM   ++EK+  AT+ML+  A +
Sbjct: 155 NRNGLGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFE 214

Query: 185 WYENERRRKGEDAFRTWKQFKEAFYAKYFPFSRRSQLERQFLNLKQGSLTVEDYEAEFDR 364
           W++  ++   E  F TW+ FKEAFY KYFP S +   E++FL LKQG+ +V +YE EF R
Sbjct: 215 WWDAHKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAEYEIEFSR 274

Query: 365 LSHF 376
           L+ F
Sbjct: 275 LARF 278


>ref|XP_004154396.1| PREDICTED: uncharacterized protein LOC101203289 [Cucumis sativus]
          Length = 655

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 2/122 (1%)
 Frame = +2

Query: 17  LGEFCRYTPPTFEEST-DPTVAEFWVNQIEITFRAMQSPEEEKVRLATFMLRDRASKWYE 193
           L +F +Y P TF+ S  DPT AE W++ +E  F  M+ PEE +V+ A F+LRDR   W+ 
Sbjct: 120 LRDFRKYDPQTFDGSLEDPTKAEMWLSSVETIFNYMRCPEEHRVQCAAFLLRDRGIIWWR 179

Query: 194 NERRRKGEDAFR-TWKQFKEAFYAKYFPFSRRSQLERQFLNLKQGSLTVEDYEAEFDRLS 370
              R  G D  + TW QFK+ FY K+F  + R    ++FL LKQG +TVE+Y+ EFD LS
Sbjct: 180 TTMRMLGGDVRQITWDQFKDCFYTKFFSANLRDAKSQEFLELKQGHMTVEEYDQEFDMLS 239

Query: 371 HF 376
            F
Sbjct: 240 RF 241


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