BLASTX nr result

ID: Dioscorea21_contig00027869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027869
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU24049.1| unknown [Glycine max]                                  114   3e-23
ref|NP_001237619.1| transcription factor [Glycine max] gi|166203...   114   3e-23
gb|ACU23894.1| unknown [Glycine max]                                  111   2e-22
dbj|BAJ96860.1| predicted protein [Hordeum vulgare subsp. vulgare]    111   3e-22
gb|ABI13400.1| WRKY transcription factor 34, partial [Hordeum vu...   111   3e-22

>gb|ACU24049.1| unknown [Glycine max]
          Length = 299

 Score =  114 bits (286), Expect = 3e-23
 Identities = 87/237 (36%), Positives = 119/237 (50%), Gaps = 32/237 (13%)
 Frame = -3

Query: 892 LSCE-REMAIQHITRGYELTKQLQSMVL-FCGEPCSELP--AGVLFEEVLQALTTALTNL 725
           L C  R  AI+ + RG +  KQL+S++   C +  S  P  A  L +EVL + T +L+ L
Sbjct: 4   LGCSSRRKAIEELLRGRDCAKQLRSVINGSCEDGSSTTPSFAEQLVKEVLMSFTNSLSFL 63

Query: 724 KFSTFCLSDDQG---------SETSNEINSGS----------RKRRKVIPWTKVTYAPHD 602
           K +    S D           SE S E N  S          ++RR    W K + AP D
Sbjct: 64  KNNPTSESHDVSNVQVCESPKSEDSQESNCKSSIIKERRGCYKRRRTEQTWEKESEAPID 123

Query: 601 DGYQWRKYGQKNIQKSKSSRSYYRCTYK-DEGCQATKYVEEKDCNDPQLFSVTYFEKHTC 425
           DG+QWRKYGQK I  +K  R+YYRCT+K D+GCQATK V+     +P L+  TY+  HTC
Sbjct: 124 DGHQWRKYGQKEILSAKFPRNYYRCTHKFDQGCQATKQVQRVQ-EEPILYKTTYYGLHTC 182

Query: 424 RASNDPIITPEIKVDQLLPKEPNLLSFESNDNMFSS--------LKASGTQQSVNGQ 278
           +     +  PEI +D + P   +   F S DN F +        L +S    SV G+
Sbjct: 183 K----NLANPEIILDPMSPSSSS--KFLSFDNSFPTPSKQECPFLSSSNLPSSVKGE 233


>ref|NP_001237619.1| transcription factor [Glycine max] gi|166203242|gb|ABY84661.1|
           transcription factor [Glycine max]
          Length = 299

 Score =  114 bits (286), Expect = 3e-23
 Identities = 87/237 (36%), Positives = 119/237 (50%), Gaps = 32/237 (13%)
 Frame = -3

Query: 892 LSCE-REMAIQHITRGYELTKQLQSMVL-FCGEPCSELP--AGVLFEEVLQALTTALTNL 725
           L C  R  AI+ + RG +  KQL+S++   C +  S  P  A  L +EVL + T +L+ L
Sbjct: 4   LGCSSRRKAIEELLRGRDCAKQLRSVINGSCEDGSSTTPSFAEQLVKEVLMSFTNSLSFL 63

Query: 724 KFSTFCLSDDQG---------SETSNEINSGS----------RKRRKVIPWTKVTYAPHD 602
           K +    S D           SE S E N  S          ++RR    W K + AP D
Sbjct: 64  KNNPTSESHDVSNVQVCESPKSEDSQESNCKSSIIKERRGCYKRRRTEQTWEKESEAPID 123

Query: 601 DGYQWRKYGQKNIQKSKSSRSYYRCTYK-DEGCQATKYVEEKDCNDPQLFSVTYFEKHTC 425
           DG+QWRKYGQK I  +K  R+YYRCT+K D+GCQATK V+     +P L+  TY+  HTC
Sbjct: 124 DGHQWRKYGQKEILSAKFPRNYYRCTHKFDQGCQATKQVQRVQ-EEPILYKTTYYGLHTC 182

Query: 424 RASNDPIITPEIKVDQLLPKEPNLLSFESNDNMFSS--------LKASGTQQSVNGQ 278
           +     +  PEI +D + P   +   F S DN F +        L +S    SV G+
Sbjct: 183 K----NLANPEIILDPMSPSSSS--KFLSFDNSFPTPSKQECPFLSSSNLPSSVKGE 233


>gb|ACU23894.1| unknown [Glycine max]
          Length = 300

 Score =  111 bits (278), Expect = 2e-22
 Identities = 79/209 (37%), Positives = 108/209 (51%), Gaps = 21/209 (10%)
 Frame = -3

Query: 880 REMAIQHITRGYELTKQLQSMVLFCGEPCSELP-AGVLFEEVLQALTTALTNLKFSTFCL 704
           R  AI+ + RG +  +QL+S++    +  S  P A  L +EVL + T +L  L  +    
Sbjct: 9   RRKAIEELLRGRDSAQQLKSVINGTYDDGSATPFAQQLVKEVLMSFTNSLLFLHNNPTSE 68

Query: 703 S---------DDQGSETSNEINSGS----------RKRRKVIPWTKVTYAPHDDGYQWRK 581
           S         D   SE S E N  S          ++RR    W K + AP DDG+ WRK
Sbjct: 69  SHHVFNVQVWDSPKSEDSQESNCKSSTIKEPRGCYKRRRTEQTWEKESEAPIDDGHHWRK 128

Query: 580 YGQKNIQKSKSSRSYYRCTYK-DEGCQATKYVEEKDCNDPQLFSVTYFEKHTCRASNDPI 404
           YGQK I  +K  R+YYRCT+K D+GCQATK V+     +P LF  TY+E HTC+ S    
Sbjct: 129 YGQKEILNAKFPRNYYRCTHKFDQGCQATKQVQRVQ-EEPILFKTTYYEHHTCKNS---- 183

Query: 403 ITPEIKVDQLLPKEPNLLSFESNDNMFSS 317
             P+I +D + P   +   F S DN FS+
Sbjct: 184 ANPDIILDPMSPSSSS--KFLSFDNSFST 210


>dbj|BAJ96860.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 259

 Score =  111 bits (277), Expect = 3e-22
 Identities = 59/139 (42%), Positives = 81/139 (58%), Gaps = 3/139 (2%)
 Frame = -3

Query: 697 DQGSETSNEINSGSRKRRKVIPWTKVTYAPHDDGYQWRKYGQKNIQKSKSSRSYYRCTYK 518
           D GS +S    +  R R++   WT  TYAP+DDG+QWRKYG+K +  S   R YYRCTYK
Sbjct: 48  DLGSSSSRTTRTQQRIRKEERTWTADTYAPYDDGHQWRKYGEKKLSNSNFPRFYYRCTYK 107

Query: 517 -DEGCQATKYVEEKDCNDPQLFSVTYFEKHTCRASNDPIITPEIKVDQLLPKEPNLLSFE 341
            D  C ATK V++KD +DP LF+VTYF  H+C  ++ PI +     +Q   +    + F 
Sbjct: 108 TDLKCPATKQVQQKDMSDPPLFTVTYFNHHSCNTTSRPIGSAPDTTEQSSSRRAVSICFG 167

Query: 340 SN--DNMFSSLKASGTQQS 290
           S+      + L + GT QS
Sbjct: 168 SHATGEQPTFLTSPGTLQS 186


>gb|ABI13400.1| WRKY transcription factor 34, partial [Hordeum vulgare subsp.
           vulgare]
          Length = 256

 Score =  111 bits (277), Expect = 3e-22
 Identities = 59/139 (42%), Positives = 81/139 (58%), Gaps = 3/139 (2%)
 Frame = -3

Query: 697 DQGSETSNEINSGSRKRRKVIPWTKVTYAPHDDGYQWRKYGQKNIQKSKSSRSYYRCTYK 518
           D GS +S    +  R R++   WT  TYAP+DDG+QWRKYG+K +  S   R YYRCTYK
Sbjct: 45  DLGSSSSRTTRTQQRIRKEERTWTADTYAPYDDGHQWRKYGEKKLSNSNFPRFYYRCTYK 104

Query: 517 -DEGCQATKYVEEKDCNDPQLFSVTYFEKHTCRASNDPIITPEIKVDQLLPKEPNLLSFE 341
            D  C ATK V++KD +DP LF+VTYF  H+C  ++ PI +     +Q   +    + F 
Sbjct: 105 TDLKCPATKQVQQKDMSDPPLFTVTYFNHHSCNTTSRPIGSAPDTTEQSSSRRAVSICFG 164

Query: 340 SN--DNMFSSLKASGTQQS 290
           S+      + L + GT QS
Sbjct: 165 SHATGEQPTFLTSPGTLQS 183


Top