BLASTX nr result

ID: Dioscorea21_contig00027845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027845
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indi...   176   2e-42
ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group] g...   174   9e-42
ref|XP_002304552.1| predicted protein [Populus trichocarpa] gi|2...   173   1e-41
ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricin...   172   2e-41
ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [...   164   5e-39

>gb|EAY85246.1| hypothetical protein OsI_06620 [Oryza sativa Indica Group]
          Length = 443

 Score =  176 bits (446), Expect = 2e-42
 Identities = 86/129 (66%), Positives = 103/129 (79%)
 Frame = +2

Query: 2   GIGIHIKTNMGRGGYIRNITFMDVRMNTVRKGLRIAGNVGDHPDNKFNPKALPVVNGVTI 181
           G GIHIKTN+GRGG+IRNIT  +VRMN+VR GLRIAG+VGDHPD  F+  ALP V+GV+I
Sbjct: 312 GYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDHPDEHFSQLALPTVDGVSI 371

Query: 182 RNVWGVNVQQPGSIEGIKNSPFSNICLSNVKFWGIKMRYTSWKCMHVSGAASEVEPWACA 361
           +NVWGVNVQQPGSIEGI+NSPF+ ICL+NVK +G +    +WKC  V GAA  V+P  CA
Sbjct: 372 KNVWGVNVQQPGSIEGIRNSPFTRICLANVKLFGWR-NNAAWKCRDVHGAALGVQPGPCA 430

Query: 362 ELARSPASG 388
           EL  S +SG
Sbjct: 431 ELTTSLSSG 439


>ref|NP_001046468.1| Os02g0256100 [Oryza sativa Japonica Group]
           gi|50251675|dbj|BAD29699.1| putative polygalacturonase
           [Oryza sativa Japonica Group]
           gi|50252020|dbj|BAD27952.1| putative polygalacturonase
           [Oryza sativa Japonica Group]
           gi|113535999|dbj|BAF08382.1| Os02g0256100 [Oryza sativa
           Japonica Group] gi|215686497|dbj|BAG87758.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215765347|dbj|BAG87044.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222622550|gb|EEE56682.1| hypothetical protein
           OsJ_06128 [Oryza sativa Japonica Group]
          Length = 443

 Score =  174 bits (440), Expect = 9e-42
 Identities = 85/129 (65%), Positives = 102/129 (79%)
 Frame = +2

Query: 2   GIGIHIKTNMGRGGYIRNITFMDVRMNTVRKGLRIAGNVGDHPDNKFNPKALPVVNGVTI 181
           G GIHIKTN+GRGG+IRNIT  +VRMN+VR GLRIAG+VGDHPD  F+  ALP V+ V+I
Sbjct: 312 GYGIHIKTNIGRGGFIRNITVDNVRMNSVRNGLRIAGDVGDHPDEHFSQLALPTVDAVSI 371

Query: 182 RNVWGVNVQQPGSIEGIKNSPFSNICLSNVKFWGIKMRYTSWKCMHVSGAASEVEPWACA 361
           +NVWGVNVQQPGSIEGI+NSPF+ ICL+NVK +G +    +WKC  V GAA  V+P  CA
Sbjct: 372 KNVWGVNVQQPGSIEGIRNSPFTRICLANVKLFGWR-NNAAWKCRDVHGAALGVQPGPCA 430

Query: 362 ELARSPASG 388
           EL  S +SG
Sbjct: 431 ELTTSLSSG 439


>ref|XP_002304552.1| predicted protein [Populus trichocarpa] gi|222841984|gb|EEE79531.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  173 bits (438), Expect = 1e-41
 Identities = 78/130 (60%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
 Frame = +2

Query: 2   GIGIHIKTNMGRGGYIRNITFMDVRMNTVRKGLRIAGNVGDHPDNKFNPKALPVVNGVTI 181
           G+GIHIKTN+GRGG+I+NIT  DV M  VRKG++IAG+VGDHPD+ FNP ALPVV G+T+
Sbjct: 277 GVGIHIKTNIGRGGFIKNITVTDVYMENVRKGIKIAGDVGDHPDDSFNPNALPVVYGITL 336

Query: 182 RNVWGVNVQQPGSIEGIKNSPFSNICLSNVKFWGIK-MRYTSWKCMHVSGAASEVEPWAC 358
           +++WG  VQQPGSI+G+KNSPF+ ICLSN+   G+   R + WKC  VSG+A  V PW C
Sbjct: 337 KSIWGEKVQQPGSIQGLKNSPFTGICLSNINLHGVPGPRSSPWKCSDVSGSALLVSPWPC 396

Query: 359 AELARSPASG 388
           +EL     +G
Sbjct: 397 SELTSPHQTG 406


>ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223549848|gb|EEF51336.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 446

 Score =  172 bits (437), Expect = 2e-41
 Identities = 78/130 (60%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
 Frame = +2

Query: 2   GIGIHIKTNMGRGGYIRNITFMDVRMNTVRKGLRIAGNVGDHPDNKFNPKALPVVNGVTI 181
           G+G+H+KTN+GRGG+IRNITF DV M   RKG++IAG+VGDHPD+ +NP ALPVV G+  
Sbjct: 311 GVGLHVKTNIGRGGFIRNITFSDVYMKNARKGIKIAGDVGDHPDDNYNPNALPVVKGIIF 370

Query: 182 RNVWGVNVQQPGSIEGIKNSPFSNICLSNVKFWGIK-MRYTSWKCMHVSGAASEVEPWAC 358
           R VWG NV QPG+I+G+K+SPF+ ICLSN+   G+   R T WKC  VSGAA EV P+ C
Sbjct: 371 RGVWGENVLQPGAIQGLKSSPFTGICLSNINLHGVPGPRSTPWKCSDVSGAALEVSPFPC 430

Query: 359 AELARSPASG 388
           +ELA +  +G
Sbjct: 431 SELATTHQTG 440


>ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
           gi|449501789|ref|XP_004161459.1| PREDICTED: probable
           polygalacturonase-like [Cucumis sativus]
          Length = 445

 Score =  164 bits (416), Expect = 5e-39
 Identities = 75/130 (57%), Positives = 98/130 (75%), Gaps = 1/130 (0%)
 Frame = +2

Query: 2   GIGIHIKTNMGRGGYIRNITFMDVRMNTVRKGLRIAGNVGDHPDNKFNPKALPVVNGVTI 181
           G+GI+IKTN+GRGG+I+NIT  +V M   RKGL+IAG+ GDHPD+KF+P ALP+V  +TI
Sbjct: 310 GVGINIKTNIGRGGFIKNITVSNVYMENSRKGLKIAGDAGDHPDDKFDPNALPIVKDITI 369

Query: 182 RNVWGVNVQQPGSIEGIKNSPFSNICLSNVKFWG-IKMRYTSWKCMHVSGAASEVEPWAC 358
           +N+WGVNVQQ GSI G+++SPF+ ICLSN+   G  + R   W C +VSGAAS V PW C
Sbjct: 370 KNIWGVNVQQAGSIYGLRDSPFTGICLSNINLRGATRPRSVPWTCSYVSGAASLVSPWPC 429

Query: 359 AELARSPASG 388
           +EL  +   G
Sbjct: 430 SELTSTDQDG 439


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