BLASTX nr result

ID: Dioscorea21_contig00027843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027843
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632709.1| PREDICTED: putative receptor protein kinase ...    82   3e-14
emb|CBI30484.3| unnamed protein product [Vitis vinifera]               82   3e-14
ref|XP_003632708.1| PREDICTED: putative receptor protein kinase ...    80   2e-13
ref|XP_002272157.2| PREDICTED: LOW QUALITY PROTEIN: putative rec...    79   4e-13
ref|XP_002322924.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13

>ref|XP_003632709.1| PREDICTED: putative receptor protein kinase ZmPK1-like [Vitis
           vinifera]
          Length = 803

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
 Frame = -1

Query: 307 GSGSCYIKNELFNGRSDPSHPANMYVKVPLYVINSSAFSRPTGQDKHELVCNSNEVR--- 137
           G G+CY K+ LFNG    + P ++Y+K+P+ +  S+    PT  +  +L+C S EV    
Sbjct: 383 GEGNCYAKSTLFNGYKSSNFPGSLYLKLPVDIETSA----PTVLNGSDLICESKEVEVVH 438

Query: 136 -TGYFRVSGGRTKWPYFYWFAFAFGAIEVLFIAFGWWFISKRKRKP 2
            +  +  +  + +W Y Y FA A GAIEVLFI  GWWF+ K    P
Sbjct: 439 SSSVYDTASKKMRWVYLYSFASAIGAIEVLFIVSGWWFLFKVHNVP 484


>emb|CBI30484.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
 Frame = -1

Query: 307 GSGSCYIKNELFNGRSDPSHPANMYVKVPLYVINSSAFSRPTGQDKHELVCNSNEVR--- 137
           G G+CY K+ LFNG    + P ++Y+K+P+ V  S+    PT  +  +L+C S EV    
Sbjct: 134 GEGNCYAKSTLFNGYKSSNFPGSLYLKLPVDVETSA----PTVLNGSDLICESKEVEVVH 189

Query: 136 -TGYFRVSGGRTKWPYFYWFAFAFGAIEVLFIAFGWWFISKRKRK 5
            +  +  +  + +W Y Y FA A GAI VLFI  GWWF+   KRK
Sbjct: 190 SSSVYDTASKKMRWVYLYSFASAIGAIVVLFIVSGWWFVRVVKRK 234



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
 Frame = -1

Query: 247 PANMYVKVPLYVINSSAFSRPTGQDKHELVCNSNEVR----TGYFRVSGGRTKWPYFYWF 80
           P ++Y+K+P+ V  S+    PT  +  + +C S EV     +  +  +  R +W Y Y F
Sbjct: 524 PGSLYLKLPMDVETSA----PTILNGADPICESKEVEVVLSSSMYDPANKRMRWVYLYSF 579

Query: 79  AFAFGAIEVLFIAFGWWFISKRKRK 5
           A A GA+E+LFI   WWF+   KRK
Sbjct: 580 ASAIGAMEILFIVSSWWFVRLVKRK 604


>ref|XP_003632708.1| PREDICTED: putative receptor protein kinase ZmPK1-like [Vitis
           vinifera]
          Length = 803

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
 Frame = -1

Query: 307 GSGSCYIKNELFNGRSDPSHPANMYVKVPLYVINSSAFSRPTGQDKHELVCNSNEVR--- 137
           G G+C+ K+ LFNG    + P ++Y+K+P+ V  S+    PT  +  +L+C S EV    
Sbjct: 383 GEGNCFAKSTLFNGFKSSNFPGSLYLKLPVDVETSA----PTVLNGSDLICESKEVEVVH 438

Query: 136 -TGYFRVSGGRTKWPYFYWFAFAFGAIEVLFIAFGWWFISKRKRKP 2
            +  +  +  + +W Y Y FA A GAIEVLFI  GWWF+ +    P
Sbjct: 439 SSSVYDTASKKMRWVYLYSFASAIGAIEVLFIVSGWWFLFRVHNVP 484


>ref|XP_002272157.2| PREDICTED: LOW QUALITY PROTEIN: putative receptor protein kinase
           ZmPK1 [Vitis vinifera]
          Length = 801

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
 Frame = -1

Query: 307 GSGSCYIKNELFNGRSDPSHPANMYVKVPLYVINSSAFSRPTGQDKHELVCNSNEVR--- 137
           G G+CY K+ LFNG    + P ++Y+K+P+ V  S+    PT  +  +L+C S EV    
Sbjct: 383 GEGNCYAKSTLFNGYKSSNFPGSLYLKLPVDVETSA----PTVLNGSDLICESKEVEVVH 438

Query: 136 -TGYFRVSGGRTKWPYFYWFAFAFGAIEVLFIAFGWWFISKRKRKP 2
            +  +  +  + +W Y Y FA A GAI VLFI  GWWF+ +    P
Sbjct: 439 SSSVYDTASKKMRWVYLYSFASAIGAIVVLFIVSGWWFLFRVHNVP 484


>ref|XP_002322924.1| predicted protein [Populus trichocarpa] gi|222867554|gb|EEF04685.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
 Frame = -1

Query: 307 GSGSCYIKNELFNGRSDPSHPANMYVKVPLYVINSSAFSRPTGQDKHELVCNSNEVRT-- 134
           G   C+ K  LFNG   PS P N+Y+++P+    +S      G D   L+C S E  T  
Sbjct: 388 GERRCFTKGVLFNGYQSPSFPGNIYLRLPVS-FETSQLGILNGSD---LICQSAESETTI 443

Query: 133 ---GYFRVSGGRTKWPYFYWFAFAFGAIEVLFIAFGWWFISKRKRKP 2
                +     RT+W YFY FA A G IE+LF+  GWWF+ +++  P
Sbjct: 444 GSPSMYNFDTKRTRWVYFYSFASAIGLIEILFVVSGWWFLFRKRGSP 490


Top