BLASTX nr result

ID: Dioscorea21_contig00027793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027793
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD39642.1|AC007591_7 Similar to gb|AJ005073 Alix (ALG-2-inte...    73   2e-11
gb|AAN12917.1| At1g15130/F9L1_7 [Arabidopsis thaliana] gi|290287...    73   2e-11
ref|NP_172965.1| programmed cell death 6-interacting protein [Ar...    73   2e-11
ref|XP_003592574.1| Rhophilin-1 [Medicago truncatula] gi|3554816...    72   4e-11
ref|XP_002892850.1| hydroxyproline-rich glycoprotein family prot...    72   5e-11

>gb|AAD39642.1|AC007591_7 Similar to gb|AJ005073 Alix (ALG-2-interacting protein X) from Mus
           musculus. ESTs gb|R90133, gb|Z17944 and gb|AA605465 come
           from this gene [Arabidopsis thaliana]
          Length = 816

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   LPGVMLAIHEKKTSTVDLYRPLRNYIVVHYSEREAQLLEDDLET 133
           L  +MLAIHEKKTS+VDLYRPLRNY+   YSEREAQL++DDLET
Sbjct: 6   LSNLMLAIHEKKTSSVDLYRPLRNYVTFTYSEREAQLIDDDLET 49


>gb|AAN12917.1| At1g15130/F9L1_7 [Arabidopsis thaliana] gi|29028754|gb|AAO64756.1|
           At1g15130/F9L1_7 [Arabidopsis thaliana]
          Length = 846

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   LPGVMLAIHEKKTSTVDLYRPLRNYIVVHYSEREAQLLEDDLET 133
           L  +MLAIHEKKTS+VDLYRPLRNY+   YSEREAQL++DDLET
Sbjct: 6   LSNLMLAIHEKKTSSVDLYRPLRNYVTFTYSEREAQLIDDDLET 49


>ref|NP_172965.1| programmed cell death 6-interacting protein [Arabidopsis thaliana]
           gi|332191149|gb|AEE29270.1| programmed cell death
           6-interacting protein [Arabidopsis thaliana]
          Length = 846

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   LPGVMLAIHEKKTSTVDLYRPLRNYIVVHYSEREAQLLEDDLET 133
           L  +MLAIHEKKTS+VDLYRPLRNY+   YSEREAQL++DDLET
Sbjct: 6   LSNLMLAIHEKKTSSVDLYRPLRNYVTFTYSEREAQLIDDDLET 49


>ref|XP_003592574.1| Rhophilin-1 [Medicago truncatula] gi|355481622|gb|AES62825.1|
           Rhophilin-1 [Medicago truncatula]
          Length = 604

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/83 (51%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
 Frame = +2

Query: 11  VMLAIHEKKTSTVDLYRPLRNYIVVHYSEREAQLLEDDLET--ATNSDATSR-NPLNPPH 181
           +MLAI EKKT+TVDLYRPLRNYI  HYSEREAQ LEDDL+T     SD     +P  P  
Sbjct: 15  IMLAIFEKKTNTVDLYRPLRNYIAFHYSEREAQNLEDDLQTLKQLRSDLERHSDPSLPAR 74

Query: 182 RTSAMTPSKPQADRLSASPLNGE 250
           R   +T  K      +  P++ E
Sbjct: 75  RDLFITYFKALCQTETRFPISSE 97


>ref|XP_002892850.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338692|gb|EFH69109.1|
           hydroxyproline-rich glycoprotein family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 845

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = +2

Query: 2   LPGVMLAIHEKKTSTVDLYRPLRNYIVVHYSEREAQLLEDDLET 133
           L  +MLAIHEKKT++VDLYRPLRNY+   YSEREAQL++DDLET
Sbjct: 6   LSNLMLAIHEKKTNSVDLYRPLRNYVTFTYSEREAQLIDDDLET 49


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