BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027742
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...   125   5e-27
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...   123   2e-26
ref|NP_001059628.1| Os07g0477000 [Oryza sativa Japonica Group] g...   119   3e-25
gb|EEE67155.1| hypothetical protein OsJ_24224 [Oryza sativa Japo...   119   3e-25
ref|XP_002300802.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24

>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/105 (56%), Positives = 75/105 (71%), Gaps = 6/105 (5%)
 Frame = +3

Query: 3   SVYDIRSIDGGFIVPGDGSATYKVVFRLVMFQPFVGEILSGKIERSDATGLHVSLGFFSD 182
           SVYDIRSIDGGF+ PGDG++TY V FRLVMF+PFVGEI++ K++ SDA GL +SLGFF D
Sbjct: 47  SVYDIRSIDGGFVFPGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDD 106

Query: 183 IFIPAYLIVQPSELEADG------IWVWKYDGSELPLDLNEEIHF 299
           I+IP +L+  P   E D       IW+W Y   + P+D  +EI F
Sbjct: 107 IYIPVHLMPNPCHCEPDPENKSQVIWIWDYQEQKFPIDGLDEIRF 151


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/105 (55%), Positives = 75/105 (71%), Gaps = 6/105 (5%)
 Frame = +3

Query: 3   SVYDIRSIDGGFIVPGDGSATYKVVFRLVMFQPFVGEILSGKIERSDATGLHVSLGFFSD 182
           SVYDIRSIDGGF+ PGDG++TY V FRLVMF+PFVGEI++ K++ SDA GL +SLGFF D
Sbjct: 47  SVYDIRSIDGGFVFPGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDD 106

Query: 183 IFIPAYLIVQPSELEADG------IWVWKYDGSELPLDLNEEIHF 299
           I+IP +L+  P   E +       IW+W Y   + P+D  +EI F
Sbjct: 107 IYIPVHLMPNPCHCEPNPEKKGQVIWIWDYQEQKFPIDGIDEIRF 151


>ref|NP_001059628.1| Os07g0477000 [Oryza sativa Japonica Group]
           gi|29837202|dbj|BAC75582.1| putative DNA-directed RNA
           polymerase III subunit 22.9 kDa polypeptide [Oryza
           sativa Japonica Group] gi|113611164|dbj|BAF21542.1|
           Os07g0477000 [Oryza sativa Japonica Group]
           gi|215765537|dbj|BAG87234.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218199590|gb|EEC82017.1| hypothetical protein
           OsI_25976 [Oryza sativa Indica Group]
          Length = 202

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/100 (61%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   SVYDIRSIDGGFIVPGDGSATYKVVFRLVMFQPFVGEILSGKIERSDATGLHVSLGFFSD 182
           SVYDIRS++GGFI PG+G +TYKV FRL+MF+PFVGE+L GKI   D  GLHVSL FFSD
Sbjct: 47  SVYDIRSVEGGFIFPGEGCSTYKVSFRLLMFRPFVGEVLVGKISGYDEKGLHVSLDFFSD 106

Query: 183 IFIPAYLIVQPSELEADGIWVWK-YDGSELPLDLNEEIHF 299
           I IP +L+   +    DG W+ K  DG EL LDL++EI F
Sbjct: 107 ISIPGHLMQYGTARALDGRWMLKTEDGDELYLDLDDEIRF 146


>gb|EEE67155.1| hypothetical protein OsJ_24224 [Oryza sativa Japonica Group]
          Length = 365

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/100 (61%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   SVYDIRSIDGGFIVPGDGSATYKVVFRLVMFQPFVGEILSGKIERSDATGLHVSLGFFSD 182
           SVYDIRS++GGFI PG+G +TYKV FRL+MF+PFVGE+L GKI   D  GLHVSL FFSD
Sbjct: 210 SVYDIRSVEGGFIFPGEGCSTYKVSFRLLMFRPFVGEVLVGKISGYDEKGLHVSLDFFSD 269

Query: 183 IFIPAYLIVQPSELEADGIWVWK-YDGSELPLDLNEEIHF 299
           I IP +L+   +    DG W+ K  DG EL LDL++EI F
Sbjct: 270 ISIPGHLMQYGTARALDGRWMLKTEDGDELYLDLDDEIRF 309


>ref|XP_002300802.1| predicted protein [Populus trichocarpa] gi|222842528|gb|EEE80075.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/105 (54%), Positives = 76/105 (72%), Gaps = 6/105 (5%)
 Frame = +3

Query: 3   SVYDIRSIDGGFIVPGDGSATYKVVFRLVMFQPFVGEILSGKIERSDATGLHVSLGFFSD 182
           S+YDIR IDGGFI PG+G++TY V FR+++F+PFVGEI+S K++ S A GLH+SLGFF D
Sbjct: 47  SIYDIRKIDGGFISPGEGASTYTVEFRMIVFRPFVGEIISAKLKESTADGLHLSLGFFDD 106

Query: 183 IFIPAYLIVQPSELEADG------IWVWKYDGSELPLDLNEEIHF 299
           I IPA LI +PS    D       +WVW+++G E  +D  +EI F
Sbjct: 107 INIPAGLIQKPSRHVPDPENRYKVLWVWEFNGEEFFVDGIDEIRF 151