BLASTX nr result

ID: Dioscorea21_contig00027737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027737
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA54206.1| TPA: cyclin-like F-box [Zea mays]                     194   6e-48
ref|XP_002455470.1| hypothetical protein SORBIDRAFT_03g011420 [S...   194   8e-48
ref|XP_003567352.1| PREDICTED: F-box protein At2g32560-like [Bra...   193   1e-47
ref|NP_001151624.1| cyclin-like F-box [Zea mays] gi|195648178|gb...   193   1e-47
ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   191   5e-47

>tpg|DAA54206.1| TPA: cyclin-like F-box [Zea mays]
          Length = 404

 Score =  194 bits (493), Expect = 6e-48
 Identities = 83/99 (83%), Positives = 90/99 (90%)
 Frame = -1

Query: 299 VYNREHGHVGFMLSCYDAQVCYDCHTDTFTARYPPHGRRTIPSEGGVQWERLRAPPVDTS 120
           VYNREHGHVGFM+SCYDA + YD HTDTF ARYPPHGRRT+  E GVQW+R+RAPPVDT 
Sbjct: 227 VYNREHGHVGFMMSCYDAALSYDFHTDTFRARYPPHGRRTVVLEDGVQWDRVRAPPVDTL 286

Query: 119 AHELHISDCLNELRPGDHIEIQWRRNKEFPYGWWYGVVG 3
           AH+LH SDCL+ELRPGDHIEIQWRRNKEFPYGWWYGVVG
Sbjct: 287 AHDLHTSDCLHELRPGDHIEIQWRRNKEFPYGWWYGVVG 325


>ref|XP_002455470.1| hypothetical protein SORBIDRAFT_03g011420 [Sorghum bicolor]
           gi|241927445|gb|EES00590.1| hypothetical protein
           SORBIDRAFT_03g011420 [Sorghum bicolor]
          Length = 408

 Score =  194 bits (492), Expect = 8e-48
 Identities = 82/99 (82%), Positives = 90/99 (90%)
 Frame = -1

Query: 299 VYNREHGHVGFMLSCYDAQVCYDCHTDTFTARYPPHGRRTIPSEGGVQWERLRAPPVDTS 120
           VYNREHGHVGFM+SCYDA++ YD HTDTF ARYPPHGRRT+  E GV W+R+RAPPVDT 
Sbjct: 231 VYNREHGHVGFMMSCYDAELSYDFHTDTFRARYPPHGRRTVVLEDGVHWDRIRAPPVDTL 290

Query: 119 AHELHISDCLNELRPGDHIEIQWRRNKEFPYGWWYGVVG 3
           AH+LH SDCL+ELRPGDHIEIQWRRNKEFPYGWWYGVVG
Sbjct: 291 AHDLHTSDCLHELRPGDHIEIQWRRNKEFPYGWWYGVVG 329


>ref|XP_003567352.1| PREDICTED: F-box protein At2g32560-like [Brachypodium distachyon]
          Length = 411

 Score =  193 bits (491), Expect = 1e-47
 Identities = 82/99 (82%), Positives = 91/99 (91%)
 Frame = -1

Query: 299 VYNREHGHVGFMLSCYDAQVCYDCHTDTFTARYPPHGRRTIPSEGGVQWERLRAPPVDTS 120
           VYNREHGHVGFM+SCYDA++ YD HTDTF ARYPPHGRRT+  E GVQW+R+RAPPVDT 
Sbjct: 234 VYNREHGHVGFMMSCYDAELSYDFHTDTFRARYPPHGRRTVVLEDGVQWDRVRAPPVDTL 293

Query: 119 AHELHISDCLNELRPGDHIEIQWRRNKEFPYGWWYGVVG 3
           AH+LH+SDCL+ELRPGD IEIQWRRNKEFPYGWWYGVVG
Sbjct: 294 AHDLHVSDCLHELRPGDSIEIQWRRNKEFPYGWWYGVVG 332


>ref|NP_001151624.1| cyclin-like F-box [Zea mays] gi|195648178|gb|ACG43557.1|
           cyclin-like F-box [Zea mays]
          Length = 407

 Score =  193 bits (490), Expect = 1e-47
 Identities = 83/99 (83%), Positives = 89/99 (89%)
 Frame = -1

Query: 299 VYNREHGHVGFMLSCYDAQVCYDCHTDTFTARYPPHGRRTIPSEGGVQWERLRAPPVDTS 120
           VYNREHGHVGFM+SCYDA + YD HTDTF ARYPPHGRRT+  E GVQW+R+RAPPVDT 
Sbjct: 230 VYNREHGHVGFMMSCYDAALSYDLHTDTFRARYPPHGRRTVVLEDGVQWDRVRAPPVDTL 289

Query: 119 AHELHISDCLNELRPGDHIEIQWRRNKEFPYGWWYGVVG 3
           AH LH SDCL+ELRPGDHIEIQWRRNKEFPYGWWYGVVG
Sbjct: 290 AHYLHTSDCLHELRPGDHIEIQWRRNKEFPYGWWYGVVG 328


>ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At2g32560-like
           [Cucumis sativus]
          Length = 369

 Score =  191 bits (485), Expect = 5e-47
 Identities = 80/99 (80%), Positives = 89/99 (89%)
 Frame = -1

Query: 299 VYNREHGHVGFMLSCYDAQVCYDCHTDTFTARYPPHGRRTIPSEGGVQWERLRAPPVDTS 120
           VYNRE+GHVGFMLSCYDA++CYD  TDTF ARYPPHGRR I  E GVQWERLR+PP+DT 
Sbjct: 219 VYNRENGHVGFMLSCYDAELCYDLRTDTFQARYPPHGRRAIAIENGVQWERLRSPPIDTP 278

Query: 119 AHELHISDCLNELRPGDHIEIQWRRNKEFPYGWWYGVVG 3
            H+LH+SDCLNEL PGDHIEIQWR+NK+FPYGWWYGVVG
Sbjct: 279 PHDLHVSDCLNELWPGDHIEIQWRKNKDFPYGWWYGVVG 317


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