BLASTX nr result

ID: Dioscorea21_contig00027721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027721
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267745.1| PREDICTED: transcription factor SPEECHLESS [...   117   7e-25
ref|NP_001132879.1| putative HLH DNA-binding domain superfamily ...   115   5e-24
ref|XP_002317746.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_003602194.1| Transcription factor SPEECHLESS [Medicago tr...   113   1e-23
ref|XP_002513589.1| DNA binding protein, putative [Ricinus commu...   113   2e-23

>ref|XP_002267745.1| PREDICTED: transcription factor SPEECHLESS [Vitis vinifera]
           gi|302143687|emb|CBI22548.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score =  117 bits (294), Expect = 7e-25
 Identities = 68/102 (66%), Positives = 77/102 (75%), Gaps = 5/102 (4%)
 Frame = -1

Query: 293 VSNKAGNIRSLEVPEIEEDEASLARKKLKF-----SNTVTVDGMNRMSHITVERNRRKQM 129
           VS K+ +  +L+  E E  EAS  RK+ K      S     DG  R+SHITVERNRRKQM
Sbjct: 64  VSQKSTSSSALQESETEL-EASPKRKRPKLAAPTSSEEGNPDGQQRVSHITVERNRRKQM 122

Query: 128 NDNLSVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLQSL 3
           N++LSVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVL+SL
Sbjct: 123 NEHLSVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSL 164


>ref|NP_001132879.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
           gi|194695644|gb|ACF81906.1| unknown [Zea mays]
           gi|413925943|gb|AFW65875.1| putative HLH DNA-binding
           domain superfamily protein [Zea mays]
          Length = 375

 Score =  115 bits (287), Expect = 5e-24
 Identities = 61/82 (74%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
 Frame = -1

Query: 245 EEDEASLARKKLKFSNTVTVD-GMNRMSHITVERNRRKQMNDNLSVLRSLMPCFYVKRGD 69
           E+  ++ A+KK K S+ V+ D G  +MSHITVERNRRKQMN++L+VLRSLMPCFYVKRGD
Sbjct: 87  EKGGSAPAQKKHKGSSAVSDDEGAAKMSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGD 146

Query: 68  QASIIGGVVDYIKELQQVLQSL 3
           QASIIGGVVDYIKELQQVL+SL
Sbjct: 147 QASIIGGVVDYIKELQQVLRSL 168


>ref|XP_002317746.1| predicted protein [Populus trichocarpa] gi|222858419|gb|EEE95966.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/64 (89%), Positives = 59/64 (92%)
 Frame = -1

Query: 194 VTVDGMNRMSHITVERNRRKQMNDNLSVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQV 15
           V  DG  RMSHITVERNRRKQMN++LSVLRSLMPCFYVKRGDQASIIGGVVDYI ELQQV
Sbjct: 83  VNPDGQQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQV 142

Query: 14  LQSL 3
           LQSL
Sbjct: 143 LQSL 146


>ref|XP_003602194.1| Transcription factor SPEECHLESS [Medicago truncatula]
           gi|355491242|gb|AES72445.1| Transcription factor
           SPEECHLESS [Medicago truncatula]
          Length = 329

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/86 (69%), Positives = 69/86 (80%), Gaps = 6/86 (6%)
 Frame = -1

Query: 242 EDEASLARKKLKFSNTV------TVDGMNRMSHITVERNRRKQMNDNLSVLRSLMPCFYV 81
           E E    RK+ K + T+      +VDG  R+SHITVERNRRKQMN++LSVLRSLMPCFYV
Sbjct: 71  ELETEPKRKRQKLTPTLLEEQINSVDGQQRVSHITVERNRRKQMNEHLSVLRSLMPCFYV 130

Query: 80  KRGDQASIIGGVVDYIKELQQVLQSL 3
           KRGDQASIIGGVVDYI ELQQ+LQ+L
Sbjct: 131 KRGDQASIIGGVVDYITELQQLLQAL 156


>ref|XP_002513589.1| DNA binding protein, putative [Ricinus communis]
           gi|223547497|gb|EEF48992.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 336

 Score =  113 bits (282), Expect = 2e-23
 Identities = 63/100 (63%), Positives = 73/100 (73%), Gaps = 1/100 (1%)
 Frame = -1

Query: 299 SQVSNKAGNIRSLEVPEIEEDEASLARKK-LKFSNTVTVDGMNRMSHITVERNRRKQMND 123
           SQ S  +  I   E  E+E    +  +K  +  S  +  DG  RMSHITVERNRRKQMN+
Sbjct: 62  SQKSTSSSAILESET-ELETSPKNKRQKTGIASSEEINPDGQQRMSHITVERNRRKQMNE 120

Query: 122 NLSVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLQSL 3
           +LSVLRSLMPCFYVKRGDQASIIGGVV+YI ELQQVLQ+L
Sbjct: 121 HLSVLRSLMPCFYVKRGDQASIIGGVVNYINELQQVLQAL 160


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