BLASTX nr result

ID: Dioscorea21_contig00027718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027718
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulip...   100   1e-20
ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vit...   103   3e-20
ref|XP_002318764.1| predicted protein [Populus trichocarpa] gi|2...    99   7e-19
ref|XP_002511110.1| DNA binding protein, putative [Ricinus commu...    97   3e-18
ref|XP_002322296.1| predicted protein [Populus trichocarpa] gi|2...    97   4e-18

>gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
          Length = 321

 Score =  100 bits (249), Expect(2) = 1e-20
 Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3   LMLDEIINYVQSLQNQVEFLSMKLASLNPILYNLGIDFDGNINQLEKLEGQSQPLPTVHP 182
           +MLDEIINYVQSLQNQVEFLSMKLA+++P+LY  G+D +G +N LE++    Q    + P
Sbjct: 179 VMLDEIINYVQSLQNQVEFLSMKLATVSPMLYEFGLDIEGQMNDLERVGSFPQDSQLLVP 238

Query: 183 -TNHIQLTAFEEATNNYRMMEASAPFLLHGEGPTAFS 290
            T   Q    EE T +Y + E SAPFLLH +GP +FS
Sbjct: 239 KTIPFQHRVCEEDTRSYSIGETSAPFLLHDQGPLSFS 275



 Score = 25.8 bits (55), Expect(2) = 1e-20
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 337 KEEAFSLNFCPTACYLST 390
           K +AFS+NFC T  +L T
Sbjct: 286 KHKAFSVNFCSTTSHLPT 303


>ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
           gi|297734492|emb|CBI15739.3| unnamed protein product
           [Vitis vinifera]
          Length = 349

 Score =  103 bits (258), Expect = 3e-20
 Identities = 63/136 (46%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
 Frame = +3

Query: 3   LMLDEIINYVQSLQNQVEFLSMKLASLNPILYNLGIDFDGNINQLEKLEGQSQPLPTVHP 182
           LMLDEIINYVQSLQNQVEFLSMKLAS+NP+ Y+ G+D D  + + E+L   + PLP++  
Sbjct: 215 LMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDFGMDLDALMVRPERLSALTSPLPSLQQ 274

Query: 183 TNHIQLTAFEE------ATNNYRMMEASAPFLLH-GEGPTAFSQDNSNSLXXXXXXXXXX 341
            +  Q TA+ +      ATNNY +M+ SA  L H G+    FSQDN  SL          
Sbjct: 275 CSPSQPTAYADTTTTFTATNNYPVMDTSASILFHQGQRLNVFSQDN-GSLLWDVDDQRQK 333

Query: 342 XXFLTQLLSNSMLSFH 389
               + L+SN++ SF+
Sbjct: 334 FINPSGLISNNLCSFN 349


>ref|XP_002318764.1| predicted protein [Populus trichocarpa] gi|222859437|gb|EEE96984.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 61/145 (42%), Positives = 83/145 (57%), Gaps = 16/145 (11%)
 Frame = +3

Query: 3   LMLDEIINYVQSLQNQVEFLSMKLASLNPILYNLGIDFDGNINQLEKLEGQSQPLPTVHP 182
           LMLDEIINYVQSLQNQVEFLSMKLAS+NP+ Y+ G++ D  + + E+L   S PLP++  
Sbjct: 216 LMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDFGMELDAFMVRPERLSSMSPPLPSLQQ 275

Query: 183 TNHIQLTAFEEA----------------TNNYRMMEASAPFLLHGEGPTAFSQDNSNSLX 314
            + IQ TAF +A                 NNY +++ S   LL G  P+AF+ ++S +L 
Sbjct: 276 CSPIQPTAFADAAAAATTTATPTTSFATANNYPLIDNSTSLLLQGMRPSAFTTEDSCNLM 335

Query: 315 XXXXXXXXXXXFLTQLLSNSMLSFH 389
                        + L SN + SFH
Sbjct: 336 WDVDERRQKFLSPSGLTSN-LCSFH 359


>ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
           gi|223550225|gb|EEF51712.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 422

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 59/120 (49%), Positives = 74/120 (61%), Gaps = 19/120 (15%)
 Frame = +3

Query: 3   LMLDEIINYVQSLQNQVEFLSMKLASLNPILYNLGIDFDGNINQLEKLEGQSQPLPTVH- 179
           LMLDEIINYVQSLQNQVEFLSMKLAS+NP+ Y+ G+DFD  + + E L   +  LP +  
Sbjct: 216 LMLDEIINYVQSLQNQVEFLSMKLASVNPLFYDFGMDFDALMVRPEGLNSLASSLPLMQQ 275

Query: 180 --PTNHIQLTAFEEAT----------------NNYRMMEASAPFLLHGEGPTAFSQDNSN 305
             PT     TAF ++T                NNY +M+ASAPFLL G+ P+ F Q N +
Sbjct: 276 CPPT-----TAFADSTATATTTTAATSTFVTANNYSLMDASAPFLLPGQRPSDFIQMNKD 330


>ref|XP_002322296.1| predicted protein [Populus trichocarpa] gi|222869292|gb|EEF06423.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 57/140 (40%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
 Frame = +3

Query: 3   LMLDEIINYVQSLQNQVEFLSMKLASLNPILYNLGIDFDGNINQLEKLEGQSQPLPTVHP 182
           LMLDEIINYVQSLQNQVEFLSMKLAS+NP+LY+ G+D D  + + E+L   S PLP++  
Sbjct: 218 LMLDEIINYVQSLQNQVEFLSMKLASVNPLLYDFGMDRDAFMVRPERLSSMSPPLPSLQH 277

Query: 183 TNHIQLTAFEEAT-----------NNYRMMEASAPFLLHGEGPTAFSQDNSNSLXXXXXX 329
            + IQ TAF +             NNY +++ SA   L G  P+ F+    +        
Sbjct: 278 NSPIQPTAFADTASATTATFATEENNYPLIDNSATLFLQGMRPSDFTTHQDSGYLMWDVD 337

Query: 330 XXXXXXFLTQLLSNSMLSFH 389
                      L+ ++ SFH
Sbjct: 338 EQRQKFLNPSGLATNLCSFH 357


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