BLASTX nr result

ID: Dioscorea21_contig00027671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027671
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559468.1| PREDICTED: ribosomal RNA small subunit methy...    96   4e-18
gb|EEE59861.1| hypothetical protein OsJ_12443 [Oryza sativa Japo...    96   4e-18
ref|NP_001051157.1| Os03g0729700 [Oryza sativa Japonica Group] g...    96   4e-18
dbj|BAJ92836.1| predicted protein [Hordeum vulgare subsp. vulgare]     91   7e-17
ref|XP_002466524.1| hypothetical protein SORBIDRAFT_01g009310 [S...    91   1e-16

>ref|XP_003559468.1| PREDICTED: ribosomal RNA small subunit methyltransferase E-like
           [Brachypodium distachyon]
          Length = 318

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 42/54 (77%), Positives = 51/54 (94%)
 Frame = +1

Query: 1   MVVGPEGDFTEEEVNLMKGAGAKPVGLGPCRLRVETATIALLSTLMLWSDAHNK 162
           +++GPEGDFT+EEVN++K AGA PVGLGPCRLRVETATI+LLS LMLWSDAH++
Sbjct: 259 LIIGPEGDFTDEEVNVLKAAGAVPVGLGPCRLRVETATISLLSALMLWSDAHHQ 312


>gb|EEE59861.1| hypothetical protein OsJ_12443 [Oryza sativa Japonica Group]
          Length = 501

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = +1

Query: 1   MVVGPEGDFTEEEVNLMKGAGAKPVGLGPCRLRVETATIALLSTLMLWSDAHNK 162
           ++VGPEGDFTEEEVN++K +GA PVGLGPCRLRVETATI+LLS LMLWSDAH +
Sbjct: 442 LIVGPEGDFTEEEVNVLKASGAVPVGLGPCRLRVETATISLLSALMLWSDAHRQ 495


>ref|NP_001051157.1| Os03g0729700 [Oryza sativa Japonica Group]
           gi|113549628|dbj|BAF13071.1| Os03g0729700, partial
           [Oryza sativa Japonica Group]
          Length = 330

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = +1

Query: 1   MVVGPEGDFTEEEVNLMKGAGAKPVGLGPCRLRVETATIALLSTLMLWSDAHNK 162
           ++VGPEGDFTEEEVN++K +GA PVGLGPCRLRVETATI+LLS LMLWSDAH +
Sbjct: 271 LIVGPEGDFTEEEVNVLKASGAVPVGLGPCRLRVETATISLLSALMLWSDAHRQ 324


>dbj|BAJ92836.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 347

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = +1

Query: 1   MVVGPEGDFTEEEVNLMKGAGAKPVGLGPCRLRVETATIALLSTLMLWSDAHNKHATE 174
           +++GPEGDFTEEEV ++K AGA PVGLGPCRLRVETATI+LLS LMLWSDA +   T+
Sbjct: 285 LIIGPEGDFTEEEVKVLKAAGAVPVGLGPCRLRVETATISLLSALMLWSDAAHHGETQ 342


>ref|XP_002466524.1| hypothetical protein SORBIDRAFT_01g009310 [Sorghum bicolor]
           gi|241920378|gb|EER93522.1| hypothetical protein
           SORBIDRAFT_01g009310 [Sorghum bicolor]
          Length = 287

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/54 (77%), Positives = 49/54 (90%)
 Frame = +1

Query: 1   MVVGPEGDFTEEEVNLMKGAGAKPVGLGPCRLRVETATIALLSTLMLWSDAHNK 162
           ++VGPEGDFTEEEV+ +K AGA PVGLGPCRLRVETATI+LLS LMLWSDA ++
Sbjct: 234 LIVGPEGDFTEEEVHSLKAAGAAPVGLGPCRLRVETATISLLSALMLWSDAKDQ 287


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