BLASTX nr result

ID: Dioscorea21_contig00027665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027665
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93128.1| unknown [Populus trichocarpa]                          185   4e-45
ref|XP_002528288.1| conserved hypothetical protein [Ricinus comm...   184   6e-45
ref|XP_002316445.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
emb|CBI17883.3| unnamed protein product [Vitis vinifera]              181   5e-44
emb|CAN79033.1| hypothetical protein VITISV_027517 [Vitis vinifera]   181   5e-44

>gb|ABK93128.1| unknown [Populus trichocarpa]
          Length = 421

 Score =  185 bits (470), Expect = 4e-45
 Identities = 96/193 (49%), Positives = 133/193 (68%), Gaps = 8/193 (4%)
 Frame = +2

Query: 8   IAMDLRQVLAGMLTISMFAMIGNMIIKDHFDYIED---GIRSDVHFNVLKVDSE-----L 163
           + +DLRQV+AG+LT++MF M+GNMI +DHFD +E    G+R DV F+  KV  +      
Sbjct: 1   MGVDLRQVVAGVLTLTMFVMLGNMIKRDHFDSVEGKFPGVR-DVEFDSEKVSDQGLVTFS 59

Query: 164 PSKINGPWEEMKQELKPCWKPPSIKAGPESNGYITLSLKSGPEFHMPQIAVAVVIARHLG 343
               NGPW E  QELKPCWK  ++    E  G++TLSL +GPE+H+ QIA AVV+AR++G
Sbjct: 60  KKSTNGPWIESGQELKPCWKESTLDE-VEPKGFVTLSLTNGPEYHVSQIADAVVVARYIG 118

Query: 344 ATLVLPDIRSGELGQKRDFEEYYDLDKFYSSLWGVVDITREIPADVASENPTIVKVPNQV 523
           ATLVLPDIR  + G +R FEE YD+DKF  SL GVV + + +P DV+  +  +VKVPN++
Sbjct: 119 ATLVLPDIRGSKPGDERKFEEIYDVDKFVKSLDGVVKVVKGLPDDVSIRDFAVVKVPNRI 178

Query: 524 SEGFLVKNIDPIF 562
           S+  + + I P+F
Sbjct: 179 SDDHIAEQIKPVF 191


>ref|XP_002528288.1| conserved hypothetical protein [Ricinus communis]
           gi|223532288|gb|EEF34090.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 421

 Score =  184 bits (468), Expect = 6e-45
 Identities = 93/192 (48%), Positives = 131/192 (68%), Gaps = 7/192 (3%)
 Frame = +2

Query: 8   IAMDLRQVLAGMLTISMFAMIGNMIIKDHFDYIED---GIRSDVHFNVLKVDSE----LP 166
           + +DLRQV+AG+LT++MF M+GNMI +DHFD +E+   G  +DV F+  KV         
Sbjct: 1   MGVDLRQVIAGILTLTMFVMLGNMIKRDHFDSVEEKFPGGATDVEFDSGKVTEHGLVTFA 60

Query: 167 SKINGPWEEMKQELKPCWKPPSIKAGPESNGYITLSLKSGPEFHMPQIAVAVVIARHLGA 346
              NGPW E  QELKPCW   +     +S G++T SL +GPE+H+ QIA AVV+AR+LGA
Sbjct: 61  KSTNGPWIEDAQELKPCWSKSNFDEVEQSKGFVTFSLTNGPEYHISQIADAVVVARYLGA 120

Query: 347 TLVLPDIRSGELGQKRDFEEYYDLDKFYSSLWGVVDITREIPADVASENPTIVKVPNQVS 526
           T+VLPDIR  + G +R FEE YD++KF  SL GVV + + +P D++  +  +VKVPN+V+
Sbjct: 121 TIVLPDIRGNKPGDERKFEEIYDVEKFVQSLDGVVKVVKYLPDDISIRDFAVVKVPNRVT 180

Query: 527 EGFLVKNIDPIF 562
           E  + K+I+ IF
Sbjct: 181 EDHISKSIEQIF 192


>ref|XP_002316445.1| predicted protein [Populus trichocarpa] gi|222865485|gb|EEF02616.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  182 bits (463), Expect = 2e-44
 Identities = 96/193 (49%), Positives = 131/193 (67%), Gaps = 8/193 (4%)
 Frame = +2

Query: 8   IAMDLRQVLAGMLTISMFAMIGNMIIKDHFDYIED---GIRSDVHFNVLKVDSE-----L 163
           + +DLRQV+AG+LT++MF M+GNMI +DHFD +E    G R DV F+  KV  +      
Sbjct: 1   MGVDLRQVVAGVLTLTMFVMLGNMIKRDHFDSVEGKFPGAR-DVEFDGEKVSEQGLVTFS 59

Query: 164 PSKINGPWEEMKQELKPCWKPPSIKAGPESNGYITLSLKSGPEFHMPQIAVAVVIARHLG 343
               NGPW E   ELKPCWK  +     ES G++T SL +GPE+H+ QIA AVV+AR++G
Sbjct: 60  KKSTNGPWVEGGLELKPCWKESNFD-DVESKGFVTFSLTNGPEYHVSQIADAVVVARYIG 118

Query: 344 ATLVLPDIRSGELGQKRDFEEYYDLDKFYSSLWGVVDITREIPADVASENPTIVKVPNQV 523
           ATLVLPDIR  + G +R FEE YD++KF  SL GVV + + +P DV+  +  +VKVPN+V
Sbjct: 119 ATLVLPDIRGNKPGDERKFEEIYDVEKFVKSLVGVVKVVKRLPEDVSIRDFAVVKVPNRV 178

Query: 524 SEGFLVKNIDPIF 562
           SE  + + I+P+F
Sbjct: 179 SEDHIAEQIEPVF 191


>emb|CBI17883.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  181 bits (460), Expect = 5e-44
 Identities = 91/191 (47%), Positives = 128/191 (67%), Gaps = 6/191 (3%)
 Frame = +2

Query: 8   IAMDLRQVLAGMLTISMFAMIGNMIIKDHFDYIEDGI--RSDVHFNVLKVDS----ELPS 169
           +AMD RQV+A +LT+SMFAM+GNMI KDHFD  +      S V ++ +K+      +LP+
Sbjct: 1   MAMDARQVIAAILTLSMFAMLGNMIKKDHFDTFQMKFPATSHVQYDTIKIAEKNIIDLPT 60

Query: 170 KINGPWEEMKQELKPCWKPPSIKAGPESNGYITLSLKSGPEFHMPQIAVAVVIARHLGAT 349
              GPW+   + LKPCW  P+++   +S G+IT S  +GPE+H+ Q+A AVVIAR+LGAT
Sbjct: 61  IRRGPWKNDSEALKPCWNKPALEEREQSTGFITFSFSNGPEYHVSQLADAVVIARYLGAT 120

Query: 350 LVLPDIRSGELGQKRDFEEYYDLDKFYSSLWGVVDITREIPADVASENPTIVKVPNQVSE 529
           LVLPDIR  E GQKR FEE YD  K   +L  VV +  + P+  ++   T+V+VPN+VSE
Sbjct: 121 LVLPDIRKSERGQKRKFEEIYDAKKCVKNLGSVVRVALDQPSQASTGKLTVVRVPNRVSE 180

Query: 530 GFLVKNIDPIF 562
            ++   I+P+F
Sbjct: 181 EYIAAKIEPVF 191


>emb|CAN79033.1| hypothetical protein VITISV_027517 [Vitis vinifera]
          Length = 415

 Score =  181 bits (460), Expect = 5e-44
 Identities = 91/191 (47%), Positives = 128/191 (67%), Gaps = 6/191 (3%)
 Frame = +2

Query: 8   IAMDLRQVLAGMLTISMFAMIGNMIIKDHFDYIEDGI--RSDVHFNVLKVDS----ELPS 169
           +AMD RQV+A +LT+SMFAM+GNMI KDHFD  +      S V ++ +K+      +LP+
Sbjct: 1   MAMDARQVIAAILTLSMFAMLGNMIKKDHFDTFQMKFPATSHVQYDTIKIAEKNIIDLPT 60

Query: 170 KINGPWEEMKQELKPCWKPPSIKAGPESNGYITLSLKSGPEFHMPQIAVAVVIARHLGAT 349
              GPW+   + LKPCW  P+++   +S G+IT S  +GPE+H+ Q+A AVVIAR+LGAT
Sbjct: 61  IRRGPWKNDSEALKPCWNKPALEEREQSTGFITFSFSNGPEYHVSQLADAVVIARYLGAT 120

Query: 350 LVLPDIRSGELGQKRDFEEYYDLDKFYSSLWGVVDITREIPADVASENPTIVKVPNQVSE 529
           LVLPDIR  E GQKR FEE YD  K   +L  VV +  + P+  ++   T+V+VPN+VSE
Sbjct: 121 LVLPDIRKSERGQKRKFEEIYDAKKCVKNLGSVVRVALDQPSQASTGKLTVVRVPNRVSE 180

Query: 530 GFLVKNIDPIF 562
            ++   I+P+F
Sbjct: 181 EYIAAKIEPVF 191


Top