BLASTX nr result

ID: Dioscorea21_contig00027663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027663
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD60449.1| NADH dehydrogenase subunit 4 [Actinidia chinensis]    167   6e-40
emb|CAD60445.1| NADH dehydrogenase subunit 4 [Actinidia polygama...   167   6e-40
emb|CAD60450.1| NADH dehydrogenase subunit 4 [Clematoclethra las...   167   6e-40
ref|NP_064080.2| nad4 gene product (mitochondrion) [Beta vulgari...   167   6e-40
gb|AFI44329.1| NADH dehydrogenase subunit 4 (mitochondrion) [Sil...   167   6e-40

>emb|CAD60449.1| NADH dehydrogenase subunit 4 [Actinidia chinensis]
          Length = 188

 Score =  167 bits (424), Expect = 6e-40
 Identities = 88/116 (75%), Positives = 88/116 (75%)
 Frame = -1

Query: 350 RQRKIKAAYQFFLYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEFSERRQIFLWIAFFA 171
           RQRKIKAAYQFFLYT                            TEFSERRQIFLWIAFFA
Sbjct: 44  RQRKIKAAYQFFLYTLLGSVFMLLAILLILFQTGTTDLQILLTTEFSERRQIFLWIAFFA 103

Query: 170 SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC 3
           SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC
Sbjct: 104 SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC 159


>emb|CAD60445.1| NADH dehydrogenase subunit 4 [Actinidia polygama]
           gi|33411847|emb|CAD60446.1| NADH dehydrogenase subunit 4
           [Actinidia latifolia] gi|33411849|emb|CAD60447.1| NADH
           dehydrogenase subunit 4 [Actinidia deliciosa var.
           deliciosa] gi|33411851|emb|CAD60448.1| NADH
           dehydrogenase subunit 4 [Actinidia arguta var. arguta]
          Length = 187

 Score =  167 bits (424), Expect = 6e-40
 Identities = 88/116 (75%), Positives = 88/116 (75%)
 Frame = -1

Query: 350 RQRKIKAAYQFFLYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEFSERRQIFLWIAFFA 171
           RQRKIKAAYQFFLYT                            TEFSERRQIFLWIAFFA
Sbjct: 46  RQRKIKAAYQFFLYTLLGSVFMLLAILLILFQTGTTDLQILLTTEFSERRQIFLWIAFFA 105

Query: 170 SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC 3
           SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC
Sbjct: 106 SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC 161


>emb|CAD60450.1| NADH dehydrogenase subunit 4 [Clematoclethra lasioclada var.
           grandis]
          Length = 180

 Score =  167 bits (424), Expect = 6e-40
 Identities = 88/116 (75%), Positives = 88/116 (75%)
 Frame = -1

Query: 350 RQRKIKAAYQFFLYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEFSERRQIFLWIAFFA 171
           RQRKIKAAYQFFLYT                            TEFSERRQIFLWIAFFA
Sbjct: 43  RQRKIKAAYQFFLYTLLGSVFMLLAILLILFQTGTTDLQILLTTEFSERRQIFLWIAFFA 102

Query: 170 SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC 3
           SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC
Sbjct: 103 SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC 158


>ref|NP_064080.2| nad4 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435100|ref|YP_004222318.1| NADH dehydrogenase
           subunit 4 [Beta vulgaris subsp. maritima]
           gi|346683195|ref|YP_004842124.1| NADH dehydrogenase
           subunit 4 [Beta macrocarpa] gi|20429167|dbj|BAB91330.1|
           NADH dehydrogenase subunit 4 [Beta vulgaris]
           gi|148491436|dbj|BAA99473.2| NADH dehydrogenase subunit
           4 [Beta vulgaris subsp. vulgaris]
           gi|317905655|emb|CBJ14051.1| NADH dehydrogenase subunit
           4 [Beta vulgaris subsp. maritima]
           gi|319439833|emb|CBJ17542.1| NADH dehydrogenase subunit
           4 [Beta vulgaris subsp. maritima]
           gi|320148081|emb|CBJ20743.1| NADH dehydrogenase subunit
           4 [Beta vulgaris subsp. maritima]
           gi|345500113|emb|CBX24931.1| NADH dehydrogenase subunit
           4 [Beta macrocarpa] gi|384939141|emb|CBL51988.1| NADH
           dehydrogenase subunit 4 (mitochondrion) [Beta vulgaris
           subsp. maritima]
          Length = 495

 Score =  167 bits (424), Expect = 6e-40
 Identities = 88/116 (75%), Positives = 88/116 (75%)
 Frame = -1

Query: 350 RQRKIKAAYQFFLYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEFSERRQIFLWIAFFA 171
           RQRKIKAAYQFFLYT                            TEFSERRQIFLWIAFFA
Sbjct: 163 RQRKIKAAYQFFLYTLLGSVFMLLAILLILLQTGTTDLQILLTTEFSERRQIFLWIAFFA 222

Query: 170 SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC 3
           SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC
Sbjct: 223 SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC 278


>gb|AFI44329.1| NADH dehydrogenase subunit 4 (mitochondrion) [Silene vulgaris]
          Length = 495

 Score =  167 bits (424), Expect = 6e-40
 Identities = 88/116 (75%), Positives = 88/116 (75%)
 Frame = -1

Query: 350 RQRKIKAAYQFFLYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEFSERRQIFLWIAFFA 171
           RQRKIKAAYQFFLYT                            TEFSERRQIFLWIAFFA
Sbjct: 163 RQRKIKAAYQFFLYTLLGSVFMLLAILLILLQTGTTDLQILLTTEFSERRQIFLWIAFFA 222

Query: 170 SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC 3
           SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC
Sbjct: 223 SFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLC 278


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