BLASTX nr result

ID: Dioscorea21_contig00027631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027631
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304513.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|NP_191705.1| brassinosteroid-responsive RING-H2 [Arabidopsis...   102   4e-20
ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   101   5e-20
gb|AFK46654.1| unknown [Lotus japonicus]                              101   7e-20
ref|XP_002509838.1| zinc finger protein, putative [Ricinus commu...   100   1e-19

>ref|XP_002304513.1| predicted protein [Populus trichocarpa] gi|222841945|gb|EEE79492.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  105 bits (261), Expect = 5e-21
 Identities = 47/80 (58%), Positives = 61/80 (76%)
 Frame = -1

Query: 397 LSALLIQESLPVIHFDDLRHHPGYAGAESCAVCLHDFEGSVEVRRLRNCRHVFHRCCLDR 218
           +SALLI+E LPV+ F +L        A+SCAVCL++FE S E+RRL NCRH+FH+CCLDR
Sbjct: 69  VSALLIREILPVVKFSELVD----PSADSCAVCLYEFEESDEIRRLANCRHIFHKCCLDR 124

Query: 217 WIELDQCSCPLCRSSLIPSD 158
           W+  DQ +CPLCR+ +IP D
Sbjct: 125 WMGYDQITCPLCRTHVIPDD 144


>ref|NP_191705.1| brassinosteroid-responsive RING-H2 [Arabidopsis thaliana]
           gi|297820998|ref|XP_002878382.1|
           brassinosteroid-responsive ring-H2 [Arabidopsis lyrata
           subsp. lyrata] gi|4689366|gb|AAD27870.1|AF134155_1 BRH1
           RING finger protein [Arabidopsis thaliana]
           gi|6850837|emb|CAB71076.1| RING finger protein
           [Arabidopsis thaliana] gi|17644157|gb|AAL38776.1|
           putative RING finger protein [Arabidopsis thaliana]
           gi|21436189|gb|AAM51382.1| putative RING finger protein
           [Arabidopsis thaliana] gi|21554590|gb|AAM63625.1| RING
           finger protein [Arabidopsis thaliana]
           gi|297324220|gb|EFH54641.1| brassinosteroid-responsive
           ring-H2 [Arabidopsis lyrata subsp. lyrata]
           gi|332646687|gb|AEE80208.1| brassinosteroid-responsive
           RING-H2 [Arabidopsis thaliana]
          Length = 170

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/79 (58%), Positives = 61/79 (77%)
 Frame = -1

Query: 394 SALLIQESLPVIHFDDLRHHPGYAGAESCAVCLHDFEGSVEVRRLRNCRHVFHRCCLDRW 215
           SALLI+E LPVI F++L +  G    E+CAVCL++FEG  E+R LRNCRH+FHR CLDRW
Sbjct: 67  SALLIREILPVIKFEELTNS-GEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRW 125

Query: 214 IELDQCSCPLCRSSLIPSD 158
           ++ DQ +CPLCR+  +P +
Sbjct: 126 MDHDQKTCPLCRTPFVPDE 144


>ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Vitis vinifera]
          Length = 168

 Score =  101 bits (252), Expect = 5e-20
 Identities = 44/80 (55%), Positives = 59/80 (73%)
 Frame = -1

Query: 397 LSALLIQESLPVIHFDDLRHHPGYAGAESCAVCLHDFEGSVEVRRLRNCRHVFHRCCLDR 218
           +SA+LI+E LPV+ F++L         + CAVCL++FEG  E+RRL NCRH+FHR CLDR
Sbjct: 62  VSAVLIREILPVMKFEELVGAGAGDPPDQCAVCLYEFEGQEEIRRLTNCRHIFHRSCLDR 121

Query: 217 WIELDQCSCPLCRSSLIPSD 158
           W++ DQ +CPLCR+  IP D
Sbjct: 122 WMDCDQKTCPLCRTPFIPDD 141


>gb|AFK46654.1| unknown [Lotus japonicus]
          Length = 167

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/80 (58%), Positives = 58/80 (72%)
 Frame = -1

Query: 397 LSALLIQESLPVIHFDDLRHHPGYAGAESCAVCLHDFEGSVEVRRLRNCRHVFHRCCLDR 218
           +SALLI+E LPV+ F +L   P     ESC VCL +FE S E+RRL NCRH+FHR CLDR
Sbjct: 62  VSALLIREILPVVKFRELVDPP-----ESCVVCLSEFEESDEIRRLANCRHIFHRACLDR 116

Query: 217 WIELDQCSCPLCRSSLIPSD 158
           W+  DQ +CPLCR+ LIP +
Sbjct: 117 WVGYDQSTCPLCRTPLIPDE 136


>ref|XP_002509838.1| zinc finger protein, putative [Ricinus communis]
           gi|223549737|gb|EEF51225.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 164

 Score =  100 bits (249), Expect = 1e-19
 Identities = 45/79 (56%), Positives = 58/79 (73%)
 Frame = -1

Query: 394 SALLIQESLPVIHFDDLRHHPGYAGAESCAVCLHDFEGSVEVRRLRNCRHVFHRCCLDRW 215
           SA+LI+E LPV+ F DL   P     +SCAVCL++FE   E+RRL NCRH+FH+ CLDRW
Sbjct: 63  SAVLIREILPVVKFSDLVDPP-----DSCAVCLYEFEDHDEIRRLTNCRHIFHKACLDRW 117

Query: 214 IELDQCSCPLCRSSLIPSD 158
           +  DQ +CPLCR+ +IP D
Sbjct: 118 VGYDQKTCPLCRTPVIPDD 136


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