BLASTX nr result

ID: Dioscorea21_contig00027610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027610
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated co...   176   1e-52
gb|ABK93224.1| unknown [Populus trichocarpa]                          173   8e-52
dbj|BAF46352.1| alpha chain of nascent polypeptide associated co...   173   1e-51
gb|ACB32231.1| nascent polypeptide associated complex alpha [Sol...   175   2e-51
gb|ABK92784.1| unknown [Populus trichocarpa]                          173   9e-51

>ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like [Vitis vinifera] gi|298205090|emb|CBI40611.3|
           unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  176 bits (445), Expect(2) = 1e-52
 Identities = 90/115 (78%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = -2

Query: 617 SKQNRREKKSRKAMLKLGMVPMAGIKRVTVRKSKSIIFVISNPEVYASPETDTYVVIGEA 438
           SKQ+R EKKSRKAMLKLGM P+ G+ RVTV+KSK+I+FVIS P+V+ SP +DTYV+ GEA
Sbjct: 58  SKQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEA 117

Query: 437 KIEDLSSQLQ-NAAEQFKAPDLSHVISKAESSTMAQDDEDVDETGVEPKDIELVM 276
           KIEDLSSQLQ  AAEQFKAPDLS+VI+K E+S+MAQDDEDVDETGVEPKDIELVM
Sbjct: 118 KIEDLSSQLQTQAAEQFKAPDLSNVIAKPEASSMAQDDEDVDETGVEPKDIELVM 172



 Score = 56.6 bits (135), Expect(2) = 1e-52
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 172 MTQAGVSKSNAIKALKAADGDIVSAIMELTN 80
           MTQAGVS+S A+KALKAADGDIVSAIMELTN
Sbjct: 172 MTQAGVSRSKAVKALKAADGDIVSAIMELTN 202


>gb|ABK93224.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  173 bits (438), Expect(2) = 8e-52
 Identities = 89/115 (77%), Positives = 102/115 (88%), Gaps = 1/115 (0%)
 Frame = -2

Query: 617 SKQNRREKKSRKAMLKLGMVPMAGIKRVTVRKSKSIIFVISNPEVYASPETDTYVVIGEA 438
           SKQ+R EKKSRKAMLKLGM  + G+ RVTV+KSK+I+FVIS P+V+ SP +DTYV+ GEA
Sbjct: 61  SKQSRSEKKSRKAMLKLGMKTIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEA 120

Query: 437 KIEDLSSQLQ-NAAEQFKAPDLSHVISKAESSTMAQDDEDVDETGVEPKDIELVM 276
           KIEDLSSQLQ  AAEQFKAPDLSHVISK E+S +AQDDE+VDETGVEPKDIELVM
Sbjct: 121 KIEDLSSQLQTQAAEQFKAPDLSHVISKPETSAIAQDDEEVDETGVEPKDIELVM 175



 Score = 56.6 bits (135), Expect(2) = 8e-52
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -3

Query: 172 MTQAGVSKSNAIKALKAADGDIVSAIMELTN 80
           MTQAGVS+S A+KALKAADGDIVSAIMELTN
Sbjct: 175 MTQAGVSRSKAVKALKAADGDIVSAIMELTN 205


>dbj|BAF46352.1| alpha chain of nascent polypeptide associated complex [Nicotiana
           benthamiana]
          Length = 201

 Score =  173 bits (439), Expect(2) = 1e-51
 Identities = 89/115 (77%), Positives = 103/115 (89%), Gaps = 1/115 (0%)
 Frame = -2

Query: 617 SKQNRREKKSRKAMLKLGMVPMAGIKRVTVRKSKSIIFVISNPEVYASPETDTYVVIGEA 438
           SKQ+R EKKSRKAMLKLGM P+ G+ RVTV+KSK+I+FVIS P+V+ SP +DTYV+ GEA
Sbjct: 57  SKQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEA 116

Query: 437 KIEDLSSQLQ-NAAEQFKAPDLSHVISKAESSTMAQDDEDVDETGVEPKDIELVM 276
           KIEDLSSQLQ  AAEQFKAP+LS+VISK E ST+AQDDEDVD+TGVEPKDIELVM
Sbjct: 117 KIEDLSSQLQTQAAEQFKAPNLSNVISKPEPSTVAQDDEDVDDTGVEPKDIELVM 171



 Score = 55.5 bits (132), Expect(2) = 1e-51
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 172 MTQAGVSKSNAIKALKAADGDIVSAIMELTN 80
           MTQAGVS++ A+KALKAADGDIVSAIMELTN
Sbjct: 171 MTQAGVSRAKAVKALKAADGDIVSAIMELTN 201


>gb|ACB32231.1| nascent polypeptide associated complex alpha [Solanum chacoense]
          Length = 199

 Score =  175 bits (443), Expect(2) = 2e-51
 Identities = 90/115 (78%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = -2

Query: 617 SKQNRREKKSRKAMLKLGMVPMAGIKRVTVRKSKSIIFVISNPEVYASPETDTYVVIGEA 438
           SKQ+R EKKSRKAMLKLGM P+ G+ RVTV+KSK+I+FVIS P+V+ SP +DTYV+ GEA
Sbjct: 55  SKQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEA 114

Query: 437 KIEDLSSQLQN-AAEQFKAPDLSHVISKAESSTMAQDDEDVDETGVEPKDIELVM 276
           KIEDLSSQLQ+ AAEQFKAP+LS+VISK E ST+AQDDEDVDETGVEPKDIELVM
Sbjct: 115 KIEDLSSQLQSQAAEQFKAPNLSNVISKPEPSTVAQDDEDVDETGVEPKDIELVM 169



 Score = 53.5 bits (127), Expect(2) = 2e-51
 Identities = 25/31 (80%), Positives = 30/31 (96%)
 Frame = -3

Query: 172 MTQAGVSKSNAIKALKAADGDIVSAIMELTN 80
           MTQAGVS++ A+KAL+AADGDIVSAIME+TN
Sbjct: 169 MTQAGVSRAKAVKALRAADGDIVSAIMEITN 199


>gb|ABK92784.1| unknown [Populus trichocarpa]
          Length = 204

 Score =  173 bits (438), Expect(2) = 9e-51
 Identities = 89/115 (77%), Positives = 102/115 (88%), Gaps = 1/115 (0%)
 Frame = -2

Query: 617 SKQNRREKKSRKAMLKLGMVPMAGIKRVTVRKSKSIIFVISNPEVYASPETDTYVVIGEA 438
           SKQ+R EKKSRKAMLKLGM  + G+ RVTV+KSK+I+FVIS P+V+ SP +DTYV+ GEA
Sbjct: 60  SKQSRSEKKSRKAMLKLGMKTIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEA 119

Query: 437 KIEDLSSQLQ-NAAEQFKAPDLSHVISKAESSTMAQDDEDVDETGVEPKDIELVM 276
           KIEDLSSQLQ  AAEQFKAPDLSHVISK E+S +AQDDE+VDETGVEPKDIELVM
Sbjct: 120 KIEDLSSQLQTQAAEQFKAPDLSHVISKPETSAVAQDDEEVDETGVEPKDIELVM 174



 Score = 53.1 bits (126), Expect(2) = 9e-51
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -3

Query: 172 MTQAGVSKSNAIKALKAADGDIVSAIMELT 83
           MTQAGVS+S A+KALKAADGDIVSAIM+LT
Sbjct: 174 MTQAGVSRSKAVKALKAADGDIVSAIMDLT 203


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