BLASTX nr result

ID: Dioscorea21_contig00027608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027608
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_003562777.1| PREDICTED: RING finger protein 170-like [Bra...    60   1e-07
tpg|DAA52399.1| TPA: protein binding protein [Zea mays]                60   2e-07
gb|ACG32881.1| protein binding protein [Zea mays]                      60   2e-07
ref|XP_002463559.1| hypothetical protein SORBIDRAFT_01g001920 [S...    60   2e-07

>ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|222835649|gb|EEE74084.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/61 (49%), Positives = 37/61 (60%)
 Frame = +2

Query: 2   KARMIFAIVLSTIYVLSPVDIVPEAXXXXXXXXXXXXXXXXXXXHVAAIYRSVLLYRHGG 181
           KAR+  A+VLS +Y++SPVDI+PE                    HVAAIYRSVL YRHGG
Sbjct: 125 KARVYIAMVLSAVYIISPVDIIPEGILGIVGLLDDLLIVLICFLHVAAIYRSVLYYRHGG 184

Query: 182 A 184
           +
Sbjct: 185 S 185


>ref|XP_003562777.1| PREDICTED: RING finger protein 170-like [Brachypodium distachyon]
          Length = 197

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = +2

Query: 2   KARMIFAIVLSTIYVLSPVDIVPEAXXXXXXXXXXXXXXXXXXXHVAAIYRSVLLYRHGG 181
           +ARMI  + LS +YVLSPVDI+PE+                   H+AA+YRS+LLYRHGG
Sbjct: 137 RARMILMVALSAVYVLSPVDILPESVLGLFGFFDDFLILVIVFLHLAAVYRSLLLYRHGG 196


>tpg|DAA52399.1| TPA: protein binding protein [Zea mays]
          Length = 196

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = +2

Query: 2   KARMIFAIVLSTIYVLSPVDIVPEAXXXXXXXXXXXXXXXXXXXHVAAIYRSVLLYRHGG 181
           +ARM+  + LS IYVLSPVDI+PE+                   H+AA+YRS+LLYRHGG
Sbjct: 136 RARMLMMVALSAIYVLSPVDILPESMLGLFGFVDDLLILLIVFLHLAAVYRSLLLYRHGG 195


>gb|ACG32881.1| protein binding protein [Zea mays]
          Length = 196

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = +2

Query: 2   KARMIFAIVLSTIYVLSPVDIVPEAXXXXXXXXXXXXXXXXXXXHVAAIYRSVLLYRHGG 181
           +ARM+  + LS IYVLSPVDI+PE+                   H+AA+YRS+LLYRHGG
Sbjct: 136 RARMLMMVALSAIYVLSPVDILPESMLGLFGFVDDLLILLIVFLHLAAVYRSLLLYRHGG 195


>ref|XP_002463559.1| hypothetical protein SORBIDRAFT_01g001920 [Sorghum bicolor]
           gi|241917413|gb|EER90557.1| hypothetical protein
           SORBIDRAFT_01g001920 [Sorghum bicolor]
          Length = 191

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = +2

Query: 2   KARMIFAIVLSTIYVLSPVDIVPEAXXXXXXXXXXXXXXXXXXXHVAAIYRSVLLYRHGG 181
           +ARM+  + LS IYVLSPVDI+PE+                   H+AA+YRS+LLYRHGG
Sbjct: 131 RARMMMMVALSAIYVLSPVDILPESMLGLLGFVDDLLILLIVFLHLAAVYRSLLLYRHGG 190