BLASTX nr result
ID: Dioscorea21_contig00027608
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00027608 (278 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|2... 61 8e-08 ref|XP_003562777.1| PREDICTED: RING finger protein 170-like [Bra... 60 1e-07 tpg|DAA52399.1| TPA: protein binding protein [Zea mays] 60 2e-07 gb|ACG32881.1| protein binding protein [Zea mays] 60 2e-07 ref|XP_002463559.1| hypothetical protein SORBIDRAFT_01g001920 [S... 60 2e-07 >ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|222835649|gb|EEE74084.1| predicted protein [Populus trichocarpa] Length = 185 Score = 61.2 bits (147), Expect = 8e-08 Identities = 30/61 (49%), Positives = 37/61 (60%) Frame = +2 Query: 2 KARMIFAIVLSTIYVLSPVDIVPEAXXXXXXXXXXXXXXXXXXXHVAAIYRSVLLYRHGG 181 KAR+ A+VLS +Y++SPVDI+PE HVAAIYRSVL YRHGG Sbjct: 125 KARVYIAMVLSAVYIISPVDIIPEGILGIVGLLDDLLIVLICFLHVAAIYRSVLYYRHGG 184 Query: 182 A 184 + Sbjct: 185 S 185 >ref|XP_003562777.1| PREDICTED: RING finger protein 170-like [Brachypodium distachyon] Length = 197 Score = 60.5 bits (145), Expect = 1e-07 Identities = 29/60 (48%), Positives = 37/60 (61%) Frame = +2 Query: 2 KARMIFAIVLSTIYVLSPVDIVPEAXXXXXXXXXXXXXXXXXXXHVAAIYRSVLLYRHGG 181 +ARMI + LS +YVLSPVDI+PE+ H+AA+YRS+LLYRHGG Sbjct: 137 RARMILMVALSAVYVLSPVDILPESVLGLFGFFDDFLILVIVFLHLAAVYRSLLLYRHGG 196 >tpg|DAA52399.1| TPA: protein binding protein [Zea mays] Length = 196 Score = 60.1 bits (144), Expect = 2e-07 Identities = 29/60 (48%), Positives = 37/60 (61%) Frame = +2 Query: 2 KARMIFAIVLSTIYVLSPVDIVPEAXXXXXXXXXXXXXXXXXXXHVAAIYRSVLLYRHGG 181 +ARM+ + LS IYVLSPVDI+PE+ H+AA+YRS+LLYRHGG Sbjct: 136 RARMLMMVALSAIYVLSPVDILPESMLGLFGFVDDLLILLIVFLHLAAVYRSLLLYRHGG 195 >gb|ACG32881.1| protein binding protein [Zea mays] Length = 196 Score = 60.1 bits (144), Expect = 2e-07 Identities = 29/60 (48%), Positives = 37/60 (61%) Frame = +2 Query: 2 KARMIFAIVLSTIYVLSPVDIVPEAXXXXXXXXXXXXXXXXXXXHVAAIYRSVLLYRHGG 181 +ARM+ + LS IYVLSPVDI+PE+ H+AA+YRS+LLYRHGG Sbjct: 136 RARMLMMVALSAIYVLSPVDILPESMLGLFGFVDDLLILLIVFLHLAAVYRSLLLYRHGG 195 >ref|XP_002463559.1| hypothetical protein SORBIDRAFT_01g001920 [Sorghum bicolor] gi|241917413|gb|EER90557.1| hypothetical protein SORBIDRAFT_01g001920 [Sorghum bicolor] Length = 191 Score = 59.7 bits (143), Expect = 2e-07 Identities = 29/60 (48%), Positives = 37/60 (61%) Frame = +2 Query: 2 KARMIFAIVLSTIYVLSPVDIVPEAXXXXXXXXXXXXXXXXXXXHVAAIYRSVLLYRHGG 181 +ARM+ + LS IYVLSPVDI+PE+ H+AA+YRS+LLYRHGG Sbjct: 131 RARMMMMVALSAIYVLSPVDILPESMLGLLGFVDDLLILLIVFLHLAAVYRSLLLYRHGG 190