BLASTX nr result

ID: Dioscorea21_contig00027574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027574
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containi...   118   4e-25
emb|CBI32673.3| unnamed protein product [Vitis vinifera]              118   4e-25
emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]   116   2e-24
ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
ref|XP_002308477.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24

>ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
           mitochondrial-like [Vitis vinifera]
          Length = 538

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/104 (52%), Positives = 78/104 (75%)
 Frame = -2

Query: 314 AYCSHGAFSYARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFT 135
           +Y +  A   A +LFDE+P+WD+VS T+ I  F R++ + +AI  FSR+L L I+PN+F+
Sbjct: 54  SYSASKALWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQFS 113

Query: 134 FGTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3
           FGT + +ST L DLN G+QLHAC  KMGL+SNVFVGS+++D Y+
Sbjct: 114 FGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYA 157



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/103 (32%), Positives = 54/103 (52%)
 Frame = -2

Query: 311 YCSHGAFSYARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTF 132
           Y     F  A  LF +MP  ++VS  ++IS + +     +A++LF  +L  G  PNE TF
Sbjct: 187 YLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERTF 246

Query: 131 GTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3
             A+ A   +  L +G+  H    K   + +VF+G+SL+  Y+
Sbjct: 247 PCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYA 289


>emb|CBI32673.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/104 (52%), Positives = 78/104 (75%)
 Frame = -2

Query: 314 AYCSHGAFSYARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFT 135
           +Y +  A   A +LFDE+P+WD+VS T+ I  F R++ + +AI  FSR+L L I+PN+F+
Sbjct: 335 SYSASKALWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQFS 394

Query: 134 FGTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3
           FGT + +ST L DLN G+QLHAC  KMGL+SNVFVGS+++D Y+
Sbjct: 395 FGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYA 438



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/103 (32%), Positives = 54/103 (52%)
 Frame = -2

Query: 311 YCSHGAFSYARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTF 132
           Y     F  A  LF +MP  ++VS  ++IS + +     +A++LF  +L  G  PNE TF
Sbjct: 468 YLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERTF 527

Query: 131 GTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3
             A+ A   +  L +G+  H    K   + +VF+G+SL+  Y+
Sbjct: 528 PCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYA 570


>emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
          Length = 795

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/105 (52%), Positives = 78/105 (74%), Gaps = 3/105 (2%)
 Frame = -2

Query: 308 CSHGAFSY---ARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEF 138
           CS+ A      A +LFDE+P+WD+VS T+ I  F R++ + +AI  FSR+L L I+PN+F
Sbjct: 310 CSYSASKELWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQF 369

Query: 137 TFGTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3
           +FGT + ++T L DLN G+QLHAC  KMGL+SNVFVGS+++D Y+
Sbjct: 370 SFGTVIPSATALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYA 414



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/103 (32%), Positives = 53/103 (51%)
 Frame = -2

Query: 311 YCSHGAFSYARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTF 132
           Y     F  A  LF  MP  ++VS  ++IS + +     +A++LF  +L  G  PNE TF
Sbjct: 444 YLKKERFDDALALFRXMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGXLPNERTF 503

Query: 131 GTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3
             A+ A   +  L +G+  H    K   + +VF+G+SL+  Y+
Sbjct: 504 PCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYA 546


>ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
           mitochondrial-like [Cucumis sativus]
          Length = 516

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/93 (55%), Positives = 71/93 (76%)
 Frame = -2

Query: 284 ARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTFGTALHASTV 105
           ARQL+D+MPH ++VS T+ I    R +++ +A+SLFS +L+L +RPNEFTFGT + +   
Sbjct: 48  ARQLYDKMPHLNVVSATTAIGRCARQHQHEEALSLFSAMLVLNLRPNEFTFGTVIQSPKA 107

Query: 104 LGDLNVGKQLHACITKMGLQSNVFVGSSLLDHY 6
           LGD+++GKQLH C  K GL SNVFVGS+LLD Y
Sbjct: 108 LGDIHIGKQLHVCAIKTGLHSNVFVGSALLDLY 140



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/94 (36%), Positives = 54/94 (57%)
 Frame = -2

Query: 284 ARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTFGTALHASTV 105
           A ++FDEMP  ++VS  S+I  F +     DA+ LF  +L  GI P + TF  A+ A+  
Sbjct: 180 ALRVFDEMPERNVVSWNSMIGGFSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAAN 239

Query: 104 LGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3
           +  + +G+  HAC  K   + +VFV +SL+  Y+
Sbjct: 240 IASIGIGRSFHACAVKFFGKLDVFVSNSLISFYA 273


>ref|XP_002308477.1| predicted protein [Populus trichocarpa] gi|222854453|gb|EEE92000.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/94 (57%), Positives = 70/94 (74%)
 Frame = -2

Query: 284 ARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTFGTALHASTV 105
           A Q+FD +P  D+VS T+II  F R ++Y +AI LFSR+L L + PNEFTFGT +H+ST 
Sbjct: 46  ALQVFDTIPDLDVVSATTIIGQFARLHQYREAIQLFSRMLFLNVTPNEFTFGTVIHSSTS 105

Query: 104 LGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3
           LGDLN+G+Q  AC  KMGL   VFVGS++LD Y+
Sbjct: 106 LGDLNLGRQFQACAMKMGLNYMVFVGSAVLDSYA 139



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/103 (33%), Positives = 60/103 (58%)
 Frame = -2

Query: 311 YCSHGAFSYARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTF 132
           Y   G F  A +LF +MP  +IV+  ++I  F +  +  +A++LF  ++  G+ P ++TF
Sbjct: 169 YLKKGRFEEAFELFKQMPERNIVTWNAMIGGFSQMGQNEEAVNLFVEMIREGLVPCQYTF 228

Query: 131 GTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3
             A+ A+  +  L +G+  HAC  K   + +VFVG+SL+  Y+
Sbjct: 229 PCAIIAAANIAALEMGRSFHACAIKTMGEFSVFVGNSLISFYA 271


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