BLASTX nr result
ID: Dioscorea21_contig00027574
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00027574 (315 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containi... 118 4e-25 emb|CBI32673.3| unnamed protein product [Vitis vinifera] 118 4e-25 emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera] 116 2e-24 ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containi... 114 8e-24 ref|XP_002308477.1| predicted protein [Populus trichocarpa] gi|2... 114 8e-24 >ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like [Vitis vinifera] Length = 538 Score = 118 bits (296), Expect = 4e-25 Identities = 55/104 (52%), Positives = 78/104 (75%) Frame = -2 Query: 314 AYCSHGAFSYARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFT 135 +Y + A A +LFDE+P+WD+VS T+ I F R++ + +AI FSR+L L I+PN+F+ Sbjct: 54 SYSASKALWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQFS 113 Query: 134 FGTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3 FGT + +ST L DLN G+QLHAC KMGL+SNVFVGS+++D Y+ Sbjct: 114 FGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYA 157 Score = 57.0 bits (136), Expect = 2e-06 Identities = 33/103 (32%), Positives = 54/103 (52%) Frame = -2 Query: 311 YCSHGAFSYARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTF 132 Y F A LF +MP ++VS ++IS + + +A++LF +L G PNE TF Sbjct: 187 YLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERTF 246 Query: 131 GTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3 A+ A + L +G+ H K + +VF+G+SL+ Y+ Sbjct: 247 PCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYA 289 >emb|CBI32673.3| unnamed protein product [Vitis vinifera] Length = 819 Score = 118 bits (296), Expect = 4e-25 Identities = 55/104 (52%), Positives = 78/104 (75%) Frame = -2 Query: 314 AYCSHGAFSYARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFT 135 +Y + A A +LFDE+P+WD+VS T+ I F R++ + +AI FSR+L L I+PN+F+ Sbjct: 335 SYSASKALWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQFS 394 Query: 134 FGTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3 FGT + +ST L DLN G+QLHAC KMGL+SNVFVGS+++D Y+ Sbjct: 395 FGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYA 438 Score = 57.0 bits (136), Expect = 2e-06 Identities = 33/103 (32%), Positives = 54/103 (52%) Frame = -2 Query: 311 YCSHGAFSYARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTF 132 Y F A LF +MP ++VS ++IS + + +A++LF +L G PNE TF Sbjct: 468 YLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNERTF 527 Query: 131 GTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3 A+ A + L +G+ H K + +VF+G+SL+ Y+ Sbjct: 528 PCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYA 570 >emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera] Length = 795 Score = 116 bits (291), Expect = 2e-24 Identities = 55/105 (52%), Positives = 78/105 (74%), Gaps = 3/105 (2%) Frame = -2 Query: 308 CSHGAFSY---ARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEF 138 CS+ A A +LFDE+P+WD+VS T+ I F R++ + +AI FSR+L L I+PN+F Sbjct: 310 CSYSASKELWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALNIKPNQF 369 Query: 137 TFGTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3 +FGT + ++T L DLN G+QLHAC KMGL+SNVFVGS+++D Y+ Sbjct: 370 SFGTVIPSATALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYA 414 Score = 56.2 bits (134), Expect = 3e-06 Identities = 33/103 (32%), Positives = 53/103 (51%) Frame = -2 Query: 311 YCSHGAFSYARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTF 132 Y F A LF MP ++VS ++IS + + +A++LF +L G PNE TF Sbjct: 444 YLKKERFDDALALFRXMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGXLPNERTF 503 Query: 131 GTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3 A+ A + L +G+ H K + +VF+G+SL+ Y+ Sbjct: 504 PCAISAVANIAALGMGRSFHGSAVKFLGKFDVFIGNSLVSFYA 546 >ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450, mitochondrial-like [Cucumis sativus] Length = 516 Score = 114 bits (285), Expect = 8e-24 Identities = 52/93 (55%), Positives = 71/93 (76%) Frame = -2 Query: 284 ARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTFGTALHASTV 105 ARQL+D+MPH ++VS T+ I R +++ +A+SLFS +L+L +RPNEFTFGT + + Sbjct: 48 ARQLYDKMPHLNVVSATTAIGRCARQHQHEEALSLFSAMLVLNLRPNEFTFGTVIQSPKA 107 Query: 104 LGDLNVGKQLHACITKMGLQSNVFVGSSLLDHY 6 LGD+++GKQLH C K GL SNVFVGS+LLD Y Sbjct: 108 LGDIHIGKQLHVCAIKTGLHSNVFVGSALLDLY 140 Score = 66.6 bits (161), Expect = 2e-09 Identities = 34/94 (36%), Positives = 54/94 (57%) Frame = -2 Query: 284 ARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTFGTALHASTV 105 A ++FDEMP ++VS S+I F + DA+ LF +L GI P + TF A+ A+ Sbjct: 180 ALRVFDEMPERNVVSWNSMIGGFSQKGHNEDAVHLFIDMLREGILPTQSTFPCAICAAAN 239 Query: 104 LGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3 + + +G+ HAC K + +VFV +SL+ Y+ Sbjct: 240 IASIGIGRSFHACAVKFFGKLDVFVSNSLISFYA 273 >ref|XP_002308477.1| predicted protein [Populus trichocarpa] gi|222854453|gb|EEE92000.1| predicted protein [Populus trichocarpa] Length = 504 Score = 114 bits (285), Expect = 8e-24 Identities = 54/94 (57%), Positives = 70/94 (74%) Frame = -2 Query: 284 ARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTFGTALHASTV 105 A Q+FD +P D+VS T+II F R ++Y +AI LFSR+L L + PNEFTFGT +H+ST Sbjct: 46 ALQVFDTIPDLDVVSATTIIGQFARLHQYREAIQLFSRMLFLNVTPNEFTFGTVIHSSTS 105 Query: 104 LGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3 LGDLN+G+Q AC KMGL VFVGS++LD Y+ Sbjct: 106 LGDLNLGRQFQACAMKMGLNYMVFVGSAVLDSYA 139 Score = 67.4 bits (163), Expect = 1e-09 Identities = 34/103 (33%), Positives = 60/103 (58%) Frame = -2 Query: 311 YCSHGAFSYARQLFDEMPHWDIVSGTSIISSFVRHNRYGDAISLFSRLLLLGIRPNEFTF 132 Y G F A +LF +MP +IV+ ++I F + + +A++LF ++ G+ P ++TF Sbjct: 169 YLKKGRFEEAFELFKQMPERNIVTWNAMIGGFSQMGQNEEAVNLFVEMIREGLVPCQYTF 228 Query: 131 GTALHASTVLGDLNVGKQLHACITKMGLQSNVFVGSSLLDHYS 3 A+ A+ + L +G+ HAC K + +VFVG+SL+ Y+ Sbjct: 229 PCAIIAAANIAALEMGRSFHACAIKTMGEFSVFVGNSLISFYA 271