BLASTX nr result

ID: Dioscorea21_contig00027568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027568
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315571.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002312587.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002315571.1| predicted protein [Populus trichocarpa] gi|222864611|gb|EEF01742.1|
           predicted protein [Populus trichocarpa]
          Length = 889

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
 Frame = -3

Query: 240 KNPRDVDSARKTRIQNIFRLCGNYRELSQQVKTPLSSKKANN--------KSSPFKGSGG 85
           +N +D  S+R+ RIQNIF LCGN REL QQ +TP+ +KK  N          S       
Sbjct: 669 ENVKDSASSRRVRIQNIFTLCGNNRELCQQFRTPIPAKKRKNVPLIECGKNLSDMMALAS 728

Query: 84  QDNYSPDIAATESPISDFVMSLSSK 10
           ++NY+P +  T+S I   V   +SK
Sbjct: 729 KENYNPSVKITDSQIEVHVKWEASK 753


>ref|XP_002312587.1| predicted protein [Populus trichocarpa] gi|222852407|gb|EEE89954.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
 Frame = -3

Query: 288  DAMEMHQLLGSEVDCGKNPRDVDSARKTRIQNIFRLCGNYRELSQQVKTPLSSKK----A 121
            D  E    +   V+  +N +D  S+R  RIQNIF LCGN REL QQ +TP  +KK     
Sbjct: 685  DGSEDRHSVSGPVNEHENSKDPASSRLLRIQNIFTLCGNNRELCQQFRTPPPAKKRVADT 744

Query: 120  NNKSSPFKGSG-------GQDNYSPDIAATESPISDFVMSLSSKKAN 1
            ++++ P    G        ++NY+P I + +S I   V   +SK  N
Sbjct: 745  DSQTPPILTDGEDYALKTSKENYNPLIGSNDSQIEVHVKWEASKGNN 791


Top