BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027556
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containi...   274   1e-71
ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containi...   258   7e-67
ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|2...   248   9e-64
ref|NP_197038.1| pentatricopeptide repeat-containing protein [Ar...   248   1e-63
ref|XP_002530010.1| pentatricopeptide repeat-containing protein,...   243   3e-62

>ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Vitis vinifera]
          Length = 632

 Score =  274 bits (701), Expect = 1e-71
 Identities = 136/244 (55%), Positives = 183/244 (75%)
 Frame = +3

Query: 3   NDVAWTVMISACIEAGRPRDALGLLGEMLFDGVHMVWLNHVSMCSLLSACSQAGDLTVGR 182
           N+VAWT+MI+  +++G  +++  L+ EM+FD    + LN+V++CS+L+ACSQ+GDL +GR
Sbjct: 214 NEVAWTIMIAGYLDSGLTQESFALVREMIFD--LEMELNYVTLCSILTACSQSGDLMMGR 271

Query: 183 WLHTHFIKATSFANNYKDHLLKVNTALIDMYGKCGRVDNALTLFERMPERNVVSWNAMLS 362
           W+H + +K        K+  + V TA++DMY KCGR+  A   F++MP+RNVVSWNAMLS
Sbjct: 272 WVHAYALKTKE-----KELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLS 326

Query: 363 GLSMQGMGLRVLH*FARMVTEGEEQPDDITIVSVLSACSRSGLVEEGRSMFQELGSIYKI 542
           GL+M G+G   L  F +M  E +  PDD+T  SVLSACS SGLV++G   F  L S+Y I
Sbjct: 327 GLAMHGLGRAALDIFPQMFKEAK--PDDVTFTSVLSACSHSGLVDQGCFYFGNLESVYGI 384

Query: 543 TPKIEHFACMVDLLGRAGCLEEAESLIRAMPMQPNEVVLGSLLASCALHGKLELGRKLMQ 722
           TPK+EH+ACMVDLLGRAG LEEAE L+R MP++PNEVVLGSLL SC++HGKL+LG  L+Q
Sbjct: 385 TPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQ 444

Query: 723 ELVQ 734
           ELVQ
Sbjct: 445 ELVQ 448



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 68/265 (25%), Positives = 109/265 (41%), Gaps = 31/265 (11%)
 Frame = +3

Query: 9   VAWTVMISACIEAGRPRDALGLLGEMLFDGVHMVWLNHVSMCSLLSACSQAGDLTVGRWL 188
           V WT ++   +      +AL +  EM   GV     + V++  L   C++ GD+ VG   
Sbjct: 84  VDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKP---DEVTLVCLFGGCARLGDVVVGAQG 140

Query: 189 HTHFIKATSFANNYKDHLLKVNTALIDMYGKCGR-------------------------- 290
           H   +K           + K   A++DMY K G                           
Sbjct: 141 HGCMVKMGLGG------VEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGV 194

Query: 291 -----VDNALTLFERMPERNVVSWNAMLSGLSMQGMGLRVLH*FARMVTEGEEQPDDITI 455
                V N   +F+ MPERN V+W  M++G    G+          M+ + E + + +T+
Sbjct: 195 IRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTL 254

Query: 456 VSVLSACSRSGLVEEGRSMFQELGSIYKITPKIEHFACMVDLLGRAGCLEEAESLIRAMP 635
            S+L+ACS+SG +  GR +        +    I     MVD+  + G +  A    + MP
Sbjct: 255 CSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMP 314

Query: 636 MQPNEVVLGSLLASCALHGKLELGR 710
            Q N V   ++L+  A+HG   LGR
Sbjct: 315 -QRNVVSWNAMLSGLAMHG---LGR 335


>ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Glycine max]
          Length = 629

 Score =  258 bits (660), Expect = 7e-67
 Identities = 132/244 (54%), Positives = 175/244 (71%)
 Frame = +3

Query: 3   NDVAWTVMISACIEAGRPRDALGLLGEMLFDGVHMVWLNHVSMCSLLSACSQAGDLTVGR 182
           N+VAWTV+I   + +G  ++A  LL EM+F       LN +++CS+LSACSQ+GD++VGR
Sbjct: 209 NEVAWTVLIKGYVGSGFTKEAFLLLKEMVFGCGFGFGLNSITLCSVLSACSQSGDVSVGR 268

Query: 183 WLHTHFIKATSFANNYKDHLLKVNTALIDMYGKCGRVDNALTLFERMPERNVVSWNAMLS 362
           W+H + +KA  +     D  + V T+L+DMY KCGR+  AL +F  MP RNVV+WNAML 
Sbjct: 269 WVHCYAVKAVGW-----DLGVMVGTSLVDMYAKCGRISAALMVFRHMPRRNVVAWNAMLC 323

Query: 363 GLSMQGMGLRVLH*FARMVTEGEEQPDDITIVSVLSACSRSGLVEEGRSMFQELGSIYKI 542
           GL+M GMG  V+  FA MV E   +PD +T +++LS+CS SGLVE+G   F +L   Y I
Sbjct: 324 GLAMHGMGKVVVEMFACMVEE--VKPDAVTFMALLSSCSHSGLVEQGWQYFHDLERAYGI 381

Query: 543 TPKIEHFACMVDLLGRAGCLEEAESLIRAMPMQPNEVVLGSLLASCALHGKLELGRKLMQ 722
            P+IEH+ACMVDLLGRAG LEEAE L++ +P+ PNEVVLGSLL +C  HGKL LG K+M+
Sbjct: 382 RPEIEHYACMVDLLGRAGRLEEAEDLVKKLPIPPNEVVLGSLLGACYAHGKLRLGEKIMR 441

Query: 723 ELVQ 734
           ELVQ
Sbjct: 442 ELVQ 445



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 65/252 (25%), Positives = 102/252 (40%), Gaps = 27/252 (10%)
 Frame = +3

Query: 18  TVMISACIEAGRPRDALGLLGEMLFDGVHMVWLNHVSMCSLLSACSQAGDLTVGRWLHTH 197
           +V  +A I    P DAL    +M    +    L+ V++   L ACS+ GD  +   +H  
Sbjct: 82  SVDYTALIRCSHPLDALRFYLQMRQRALP---LDGVALICALGACSKLGDSNLVPQMHVG 138

Query: 198 -----FIKATSFANNYKDHLLKVN--------------------TALIDMYGKCGRVDNA 302
                F++ T   N   D  +K                      T +++   KC  V++ 
Sbjct: 139 VVKFGFLRHTKVLNGVMDGYVKCGLVGEARRVFEEIEEPSVVSWTVVLEGVVKCEGVESG 198

Query: 303 LTLFERMPERNVVSWNAMLSGLSMQGMGLRVLH*FARMV--TEGEEQPDDITIVSVLSAC 476
             +F+ MPERN V+W  ++ G    G           MV         + IT+ SVLSAC
Sbjct: 199 KVVFDEMPERNEVAWTVLIKGYVGSGFTKEAFLLLKEMVFGCGFGFGLNSITLCSVLSAC 258

Query: 477 SRSGLVEEGRSMFQELGSIYKITPKIEHFACMVDLLGRAGCLEEAESLIRAMPMQPNEVV 656
           S+SG V  GR +             +     +VD+  + G +  A  + R MP + N V 
Sbjct: 259 SQSGDVSVGRWVHCYAVKAVGWDLGVMVGTSLVDMYAKCGRISAALMVFRHMPRR-NVVA 317

Query: 657 LGSLLASCALHG 692
             ++L   A+HG
Sbjct: 318 WNAMLCGLAMHG 329


>ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|222867076|gb|EEF04207.1|
           predicted protein [Populus trichocarpa]
          Length = 636

 Score =  248 bits (633), Expect = 9e-64
 Identities = 127/244 (52%), Positives = 172/244 (70%)
 Frame = +3

Query: 3   NDVAWTVMISACIEAGRPRDALGLLGEMLFDGVHMVWLNHVSMCSLLSACSQAGDLTVGR 182
           N+V WT+MI+  +  G  R+   LL EM+      + LN V++ S+LSAC+Q+GD+ +GR
Sbjct: 218 NEVGWTIMIAGYVGNGFSREGFLLLDEMVLR--FRLGLNFVTLSSILSACAQSGDVLMGR 275

Query: 183 WLHTHFIKATSFANNYKDHLLKVNTALIDMYGKCGRVDNALTLFERMPERNVVSWNAMLS 362
           W+H + +K        ++  + V TAL+DMY KCG +D A  +F+ +P+RNVV+WNAML 
Sbjct: 276 WVHVYALKGMG-----REMHIMVGTALVDMYAKCGPIDMAFKVFKYLPKRNVVAWNAMLG 330

Query: 363 GLSMQGMGLRVLH*FARMVTEGEEQPDDITIVSVLSACSRSGLVEEGRSMFQELGSIYKI 542
           GL+M G G  VL  F +M+ E +  PDD+T ++VLSACS SGLV++G   F+ L S Y  
Sbjct: 331 GLAMHGRGKFVLDIFPKMIEEAK--PDDLTFMAVLSACSHSGLVDQGYHYFRSLESEYGT 388

Query: 543 TPKIEHFACMVDLLGRAGCLEEAESLIRAMPMQPNEVVLGSLLASCALHGKLELGRKLMQ 722
           TPKIEH+ACMVD+LGRAG LEEA  LI+ MPM PNEVVLGSLL SC  HGKL+LG +++Q
Sbjct: 389 TPKIEHYACMVDILGRAGHLEEAVMLIKKMPMCPNEVVLGSLLGSCNAHGKLQLGERILQ 448

Query: 723 ELVQ 734
           EL+Q
Sbjct: 449 ELIQ 452



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 36/273 (13%)
 Frame = +3

Query: 15  WTVMISACIEAG-RPRDALGLLGEMLFDGVHMVWLNHVSMCSLLSACSQAGDLTVGRWLH 191
           WT ++++ ++ G +P +      EM  +GV    L+ V+M S+   C++  DL +GR   
Sbjct: 89  WTTLLTSLVQHGTKPSEGFFFFKEMRKEGVV---LDDVAMISVFVLCTRVEDLGMGRQAQ 145

Query: 192 THFIKATSFANNYKDHLLKVNTALIDMYGKCGRVDNALTLFERMPERNVVSWNAMLSGL- 368
              +K            +KV  A+++MY KCG V+    +F  M ERNVVSW+ +L G+ 
Sbjct: 146 GCLVKMGLGLG------VKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVV 199

Query: 369 ----------------SMQGMGLRVL------H*FAR--------MVTEGEEQPDDITIV 458
                               +G  ++      + F+R        MV       + +T+ 
Sbjct: 200 KWEGVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLS 259

Query: 459 SVLSACSRSGLVEEGRSMFQELGSIYKITPKIEHFACMVDLLGRAGCLEEAESLIRAMPM 638
           S+LSAC++SG V  GR +             I     +VD+  + G ++ A  + + +P 
Sbjct: 260 SILSACAQSGDVLMGRWVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLPK 319

Query: 639 QPNEVVLGSLLASCALHGK----LELGRKLMQE 725
           + N V   ++L   A+HG+    L++  K+++E
Sbjct: 320 R-NVVAWNAMLGGLAMHGRGKFVLDIFPKMIEE 351


>ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15340, mitochondrial; Flags: Precursor
           gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis
           thaliana] gi|332004768|gb|AED92151.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  248 bits (632), Expect = 1e-63
 Identities = 126/247 (51%), Positives = 175/247 (70%), Gaps = 3/247 (1%)
 Frame = +3

Query: 3   NDVAWTVMISACIEAGRPRDALGLLGEMLFDGVHMVWLNHVSMCSLLSACSQAGDLTVGR 182
           N VAWTVM++  + AG  R+ L LL EM+F   H   LN V++CS+LSAC+Q+G+L VGR
Sbjct: 207 NAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGH--GLNFVTLCSMLSACAQSGNLVVGR 264

Query: 183 WLHTHFIKATSFAN---NYKDHLLKVNTALIDMYGKCGRVDNALTLFERMPERNVVSWNA 353
           W+H + +K         +Y D  + V TAL+DMY KCG +D+++ +F  M +RNVV+WNA
Sbjct: 265 WVHVYALKKEMMMGEEASYDD--VMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNA 322

Query: 354 MLSGLSMQGMGLRVLH*FARMVTEGEEQPDDITIVSVLSACSRSGLVEEGRSMFQELGSI 533
           + SGL+M G G  V+  F +M+ E   +PDD+T  +VLSACS SG+V+EG   F  L   
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQMIRE--VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RF 379

Query: 534 YKITPKIEHFACMVDLLGRAGCLEEAESLIRAMPMQPNEVVLGSLLASCALHGKLELGRK 713
           Y + PK++H+ACMVDLLGRAG +EEAE L+R MP+ PNEVVLGSLL SC++HGK+E+  +
Sbjct: 380 YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAER 439

Query: 714 LMQELVQ 734
           + +EL+Q
Sbjct: 440 IKRELIQ 446



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 71/272 (26%), Positives = 113/272 (41%), Gaps = 41/272 (15%)
 Frame = +3

Query: 3   NDVAWTVMISACIEAGRPRDALGLLGEMLFDGVHMVWLNHVSMCSLLSACSQAGDLTVGR 182
           ++V WT ++S+    G   +++ L  EM    V    ++ VS+  L   C++  DL   +
Sbjct: 75  DNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVE---IDDVSVVCLFGVCAKLEDLGFAQ 131

Query: 183 WLHTHFIKATSFANNYKDHLLKVNTALIDMYGKCGRVDNALTLFER-------------- 320
             H   +K     +      +KV  AL+DMYGKCG V     +FE               
Sbjct: 132 QGHGVAVKMGVLTS------VKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLD 185

Query: 321 -----------------MPERNVVSWNAMLSGLSMQGMGLRVLH*FARMVTEGEEQPDDI 449
                            MPERN V+W  M++G    G    VL   A MV       + +
Sbjct: 186 TVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFV 245

Query: 450 TIVSVLSACSRSGLVEEGR----------SMFQELGSIYKITPKIEHFACMVDLLGRAGC 599
           T+ S+LSAC++SG +  GR           M  E  S   +         +VD+  + G 
Sbjct: 246 TLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVG----TALVDMYAKCGN 301

Query: 600 LEEAESLIRAMPMQPNEVVLGSLLASCALHGK 695
           ++ + ++ R M  + N V   +L +  A+HGK
Sbjct: 302 IDSSMNVFRLM-RKRNVVTWNALFSGLAMHGK 332


>ref|XP_002530010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530489|gb|EEF32372.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score =  243 bits (620), Expect = 3e-62
 Identities = 126/236 (53%), Positives = 170/236 (72%)
 Frame = +3

Query: 3   NDVAWTVMISACIEAGRPRDALGLLGEMLFDGVHMVWLNHVSMCSLLSACSQAGDLTVGR 182
           N+V WT+MIS  + +G  ++   LL EM+  G+ +  LN+V++CS+LSAC+Q+GD+ +GR
Sbjct: 226 NEVGWTIMISGYVGSGFCKEGFLLLSEMVL-GLRLE-LNYVTLCSILSACAQSGDVVMGR 283

Query: 183 WLHTHFIKATSFANNYKDHLLKVNTALIDMYGKCGRVDNALTLFERMPERNVVSWNAMLS 362
           W+H + +K        ++  + V TALIDMY KCGR+  A  +F+ +P RNVV+WNA+L 
Sbjct: 284 WVHVYALKKMG-----REIDMMVGTALIDMYAKCGRIKMAYEVFKYLPRRNVVAWNAILG 338

Query: 363 GLSMQGMGLRVLH*FARMVTEGEEQPDDITIVSVLSACSRSGLVEEGRSMFQELGSIYKI 542
           GL+M G G  VL  F +M+ E   +PDD+T ++VLSACS SGLV++G   F  L S Y I
Sbjct: 339 GLAMHGKGRIVLVIFPKMIQE--TKPDDLTFIAVLSACSHSGLVDQGCQYFHILESEYGI 396

Query: 543 TPKIEHFACMVDLLGRAGCLEEAESLIRAMPMQPNEVVLGSLLASCALHGKLELGR 710
           TPKIEH+AC+VDLLGRAG LEEAE LI+ MPM PNE VLGSLL SC +HGKL+LG+
Sbjct: 397 TPKIEHYACVVDLLGRAGRLEEAEMLIKKMPMPPNEFVLGSLLGSCYVHGKLQLGK 452



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 69/277 (24%), Positives = 129/277 (46%), Gaps = 37/277 (13%)
 Frame = +3

Query: 15  WTVMISACIE-AGRPRDALGLLGEMLFDGVHMVWLNHVSMCSLLSACSQAGDLTVGRWLH 191
           WT ++S   +    PR+A  L  EM   GV    L+ V+   + S C++ G+L +GR  H
Sbjct: 97  WTSLLSCLAKHTSTPRNAFSLFEEMRKRGVI---LDDVAFVCVFSLCARVGNLEMGRQAH 153

Query: 192 THFIKATSFANNYKDHLLKVNTALIDMYGKCGRVDNALTLFERMPERNVVSWNAMLSG-L 368
              +K     N      +KV  A++++Y KC  +  A  +F  M ER++VSW A+L G +
Sbjct: 154 GCVVKMGFGIN------VKVCNAVMNVYVKCRLMGEAKGVFSEMGERDIVSWTALLEGVV 207

Query: 369 SMQGM---------------------------------GLRVLH*FARMVTEGEEQPDDI 449
           + +G+                                 G  +L   + MV     + + +
Sbjct: 208 NWEGVENGKVVFDQMPERNEVGWTIMISGYVGSGFCKEGFLLL---SEMVLGLRLELNYV 264

Query: 450 TIVSVLSACSRSGLVEEGRSMFQELGSIYKITPKIEHF--ACMVDLLGRAGCLEEAESLI 623
           T+ S+LSAC++SG V  GR  +  + ++ K+  +I+      ++D+  + G ++ A  + 
Sbjct: 265 TLCSILSACAQSGDVVMGR--WVHVYALKKMGREIDMMVGTALIDMYAKCGRIKMAYEVF 322

Query: 624 RAMPMQPNEVVLGSLLASCALHGKLELGRKLMQELVQ 734
           + +P + N V   ++L   A+HGK  +   +  +++Q
Sbjct: 323 KYLPRR-NVVAWNAILGGLAMHGKGRIVLVIFPKMIQ 358