BLASTX nr result

ID: Dioscorea21_contig00027541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027541
         (1076 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001151239.1| clathrin assembly protein [Zea mays] gi|1956...   220   5e-55
ref|NP_001062002.1| Os08g0467300 [Oryza sativa Japonica Group] g...   215   2e-53
gb|EAZ07282.1| hypothetical protein OsI_29529 [Oryza sativa Indi...   215   2e-53
tpg|DAA48403.1| TPA: putative ENTH/ANTH/VHS superfamily protein ...   214   3e-53
ref|NP_001151341.1| clathrin assembly protein [Zea mays] gi|1956...   214   3e-53

>ref|NP_001151239.1| clathrin assembly protein [Zea mays] gi|195645252|gb|ACG42094.1|
            clathrin assembly protein [Zea mays]
            gi|413921841|gb|AFW61773.1| putative ENTH/ANTH/VHS
            superfamily protein [Zea mays]
          Length = 388

 Score =  220 bits (560), Expect = 5e-55
 Identities = 132/263 (50%), Positives = 157/263 (59%), Gaps = 36/263 (13%)
 Frame = +2

Query: 395  KDRRSLYLCRIRGGAKRP---------WGVDLESAVIRATSHDERAVDYSSAGRVFTWAR 547
            KDRRSLYL R+     RP         W  +LE+AVIRATSHDER+VDY +A RVF  AR
Sbjct: 16   KDRRSLYLRRVAALRPRPASGVAAAVLWSPELEAAVIRATSHDERSVDYGNAARVFALAR 75

Query: 548  ASPSFLQPLMWSIARRATRTSSWPVALKSLLIAHGLLLSTTAGAGS-SLGRLPFDLSDFR 724
            ASP  +QPLMW++ARRA RT  W VALK+L++AHGLLL       S  LGR+PFDL+DFR
Sbjct: 76   ASPVSVQPLMWALARRAGRTRCWAVALKALMLAHGLLLRPDLAPRSVRLGRIPFDLADFR 135

Query: 725  DRSSP-----AFSSFVRAYFRFLDLRSV-------------STDLDPXXXXXXXXXXXXX 850
            DRSSP      FS+FVRAYFRFLD RS+              TD +              
Sbjct: 136  DRSSPPSKSSGFSAFVRAYFRFLDTRSLFIAQDLDAVADTGETDGEDARLDHVTKQQHLL 195

Query: 851  XXXXXIRPCSDGMGVSLILETMDCVLIEVFEIYSGICSGIAGFLVGFLGSKT-------- 1006
                 IRP  DGM + LI E MDCV+IE+FE+YS IC+GIA FLV  LGS          
Sbjct: 196  HLLLQIRPYGDGMELGLIFEAMDCVVIEIFEVYSEICTGIARFLVAVLGSAPMTPRPRPG 255

Query: 1007 RDLGEAEKKQGVVGIRVLKRAGE 1075
              L  A +++ V G+RVLK A E
Sbjct: 256  ETLAAARRRRAVQGMRVLKNAAE 278


>ref|NP_001062002.1| Os08g0467300 [Oryza sativa Japonica Group]
            gi|42407391|dbj|BAD09549.1| unknown protein [Oryza sativa
            Japonica Group] gi|42409439|dbj|BAD10784.1| unknown
            protein [Oryza sativa Japonica Group]
            gi|113623971|dbj|BAF23916.1| Os08g0467300 [Oryza sativa
            Japonica Group] gi|125603705|gb|EAZ43030.1| hypothetical
            protein OsJ_27617 [Oryza sativa Japonica Group]
          Length = 396

 Score =  215 bits (547), Expect = 2e-53
 Identities = 131/262 (50%), Positives = 159/262 (60%), Gaps = 35/262 (13%)
 Frame = +2

Query: 395  KDRRSLYLCRIRGGAKRPWG---------VDLESAVIRATSHDERAVDYSSAGRVFTWAR 547
            KDRRSLYL R+   A RP            +LE+ VIRATSHDER+VDY SA RVF  AR
Sbjct: 16   KDRRSLYLTRV--AALRPASPAAAAALRNAELEAVVIRATSHDERSVDYRSAARVFALAR 73

Query: 548  ASPSFLQPLMWSIARRATRTSSWPVALKSLLIAHGLLL-STTAGAGSSLGRLPFDLSDFR 724
            ASP+ LQPLMW++ARRA RT  W VALK+L++AHGLLL S  A   + LGR+PFDL+DFR
Sbjct: 74   ASPAVLQPLMWALARRAGRTRCWAVALKALMLAHGLLLRSDLAPRAARLGRVPFDLADFR 133

Query: 725  DRSS-----PAFSSFVRAYFRFLDLRSV------------STDLDPXXXXXXXXXXXXXX 853
            DRSS       FS+FVRAYF FLD RS+              D +               
Sbjct: 134  DRSSSPTKTSGFSAFVRAYFHFLDTRSLFAAQDMDNNDDDDADDEDARLDGVSRLQHLLD 193

Query: 854  XXXXIRPCSDGMGVSLILETMDCVLIEVFEIYSGICSGIAGFLVGFLGSKT--------R 1009
                IRP  DGM   LILE MDCV+IE+FE+YS IC+GIA FLVG LGS           
Sbjct: 194  LLMQIRPYGDGMEQGLILEAMDCVVIEIFEVYSQICTGIARFLVGVLGSAPTTPRPRPGE 253

Query: 1010 DLGEAEKKQGVVGIRVLKRAGE 1075
             +  A +++G+ G+RVL++A E
Sbjct: 254  TMAAARRRRGLQGMRVLRKASE 275


>gb|EAZ07282.1| hypothetical protein OsI_29529 [Oryza sativa Indica Group]
          Length = 396

 Score =  215 bits (547), Expect = 2e-53
 Identities = 131/262 (50%), Positives = 159/262 (60%), Gaps = 35/262 (13%)
 Frame = +2

Query: 395  KDRRSLYLCRIRGGAKRPWG---------VDLESAVIRATSHDERAVDYSSAGRVFTWAR 547
            KDRRSLYL R+   A RP            +LE+ VIRATSHDER+VDY SA RVF  AR
Sbjct: 16   KDRRSLYLTRV--AALRPASPAAAAALRNAELEAVVIRATSHDERSVDYRSAARVFALAR 73

Query: 548  ASPSFLQPLMWSIARRATRTSSWPVALKSLLIAHGLLL-STTAGAGSSLGRLPFDLSDFR 724
            ASP+ LQPLMW++ARRA RT  W VALK+L++AHGLLL S  A   + LGR+PFDL+DFR
Sbjct: 74   ASPAVLQPLMWALARRAGRTRCWAVALKALMLAHGLLLRSDLAPRAARLGRVPFDLADFR 133

Query: 725  DRSS-----PAFSSFVRAYFRFLDLRSV------------STDLDPXXXXXXXXXXXXXX 853
            DRSS       FS+FVRAYF FLD RS+              D +               
Sbjct: 134  DRSSSPTKTSGFSAFVRAYFHFLDTRSLFAAQDMDNNDDDDADDEDARLDGVSRLQHLLD 193

Query: 854  XXXXIRPCSDGMGVSLILETMDCVLIEVFEIYSGICSGIAGFLVGFLGSKT--------R 1009
                IRP  DGM   LILE MDCV+IE+FE+YS IC+GIA FLVG LGS           
Sbjct: 194  LLMQIRPYGDGMEQGLILEAMDCVVIEIFEVYSQICTGIARFLVGVLGSAPTTPRPRPGE 253

Query: 1010 DLGEAEKKQGVVGIRVLKRAGE 1075
             +  A +++G+ G+RVL++A E
Sbjct: 254  TMAAARRRRGLQGMRVLRKASE 275


>tpg|DAA48403.1| TPA: putative ENTH/ANTH/VHS superfamily protein [Zea mays]
          Length = 492

 Score =  214 bits (545), Expect = 3e-53
 Identities = 134/262 (51%), Positives = 160/262 (61%), Gaps = 35/262 (13%)
 Frame = +2

Query: 395  KDRRSLYLCRIRGGAKRPW-GV--------DLESAVIRATSHDERAVDYSSAGRVFTWAR 547
            KDRRSLYL R+     RP  GV         LE+AVIRATSHDER+VD+ SA RVF  AR
Sbjct: 112  KDRRSLYLTRVVALRPRPVSGVATPALRSPKLEAAVIRATSHDERSVDHGSAARVFALAR 171

Query: 548  ASPSFLQPLMWSIARRATRTSSWPVALKSLLIAHGLLL-STTAGAGSSLGRLPFDLSDFR 724
            ASP  LQPLMW++ARRA RT  W VALK+L++AHGLLL S  A   + LGR+PFDL+DFR
Sbjct: 172  ASPPSLQPLMWALARRARRTRCWAVALKALVLAHGLLLRSDVAPRAARLGRVPFDLADFR 231

Query: 725  DRSSP-----AFSSFVRAYFRFLDLRSVST------------DLDPXXXXXXXXXXXXXX 853
            DRSSP      FS+FVRAYFRFLD RS+ T            D +               
Sbjct: 232  DRSSPPSKSSGFSAFVRAYFRFLDTRSLFTAQELDAANSGEADGEDARLDSVTKLQHLLD 291

Query: 854  XXXXIRPCSDGMGVSLILETMDCVLIEVFEIYSGICSGIAGFLVGFLGSKT--------R 1009
                IRP  DG+   LILE MDCV+IE+FE+ S IC+GIA FLV  LGS           
Sbjct: 292  LLMQIRPYGDGVQQGLILEAMDCVVIEIFEVNSQICTGIARFLVAVLGSAPTTPRARPGE 351

Query: 1010 DLGEAEKKQGVVGIRVLKRAGE 1075
             L  A +++GV G+RVL++A E
Sbjct: 352  TLAAARRRRGVQGMRVLRKAAE 373


>ref|NP_001151341.1| clathrin assembly protein [Zea mays] gi|195645934|gb|ACG42435.1|
            clathrin assembly protein [Zea mays]
          Length = 396

 Score =  214 bits (545), Expect = 3e-53
 Identities = 134/262 (51%), Positives = 160/262 (61%), Gaps = 35/262 (13%)
 Frame = +2

Query: 395  KDRRSLYLCRIRGGAKRPW-GV--------DLESAVIRATSHDERAVDYSSAGRVFTWAR 547
            KDRRSLYL R+     RP  GV         LE+AVIRATSHDER+VD+ SA RVF  AR
Sbjct: 16   KDRRSLYLTRVVALRPRPVSGVATPALRSPKLEAAVIRATSHDERSVDHGSAARVFALAR 75

Query: 548  ASPSFLQPLMWSIARRATRTSSWPVALKSLLIAHGLLL-STTAGAGSSLGRLPFDLSDFR 724
            ASP  LQPLMW++ARRA RT  W VALK+L++AHGLLL S  A   + LGR+PFDL+DFR
Sbjct: 76   ASPPSLQPLMWALARRARRTRCWAVALKALVLAHGLLLRSDVAPRAARLGRVPFDLADFR 135

Query: 725  DRSSP-----AFSSFVRAYFRFLDLRSVST------------DLDPXXXXXXXXXXXXXX 853
            DRSSP      FS+FVRAYFRFLD RS+ T            D +               
Sbjct: 136  DRSSPPSKSSGFSAFVRAYFRFLDTRSLFTAQELDAANSGEADGEDARLDSVTKLQHLLD 195

Query: 854  XXXXIRPCSDGMGVSLILETMDCVLIEVFEIYSGICSGIAGFLVGFLGSKT--------R 1009
                IRP  DG+   LILE MDCV+IE+FE+ S IC+GIA FLV  LGS           
Sbjct: 196  LLMQIRPYGDGVQQGLILEAMDCVVIEIFEVNSQICTGIARFLVAVLGSAPTTPRARPGE 255

Query: 1010 DLGEAEKKQGVVGIRVLKRAGE 1075
             L  A +++GV G+RVL++A E
Sbjct: 256  TLAAARRRRGVQGMRVLRKAAE 277


Top