BLASTX nr result

ID: Dioscorea21_contig00027531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027531
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26997.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|XP_002283623.1| PREDICTED: zinc finger protein 6 [Vitis vini...   110   9e-23
ref|XP_002314851.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|XP_004169000.1| PREDICTED: zinc finger protein 6-like [Cucum...   103   2e-20
ref|XP_004135395.1| PREDICTED: zinc finger protein 6-like [Cucum...   103   2e-20

>emb|CBI26997.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/87 (67%), Positives = 62/87 (71%), Gaps = 9/87 (10%)
 Frame = +3

Query: 15  NSRLKIFGFSVSED--VEEHATPAMSSTDG-------KKYECQYCCREFANSQALGGHQN 167
           N RLKIFGF+VSED  VE   TP+ S   G       +KYECQYCCREFANSQALGGHQN
Sbjct: 55  NGRLKIFGFNVSEDEDVESSKTPSGSPESGGFPATGDRKYECQYCCREFANSQALGGHQN 114

Query: 168 AHKKERQQLKRAQMHRTTPATVVYPRN 248
           AHKKERQQLKRAQM  T  A   Y RN
Sbjct: 115 AHKKERQQLKRAQMQATRNAATSYIRN 141


>ref|XP_002283623.1| PREDICTED: zinc finger protein 6 [Vitis vinifera]
           gi|147769067|emb|CAN72502.1| hypothetical protein
           VITISV_027276 [Vitis vinifera]
          Length = 221

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/87 (67%), Positives = 62/87 (71%), Gaps = 9/87 (10%)
 Frame = +3

Query: 15  NSRLKIFGFSVSED--VEEHATPAMSSTDG-------KKYECQYCCREFANSQALGGHQN 167
           N RLKIFGF+VSED  VE   TP+ S   G       +KYECQYCCREFANSQALGGHQN
Sbjct: 16  NGRLKIFGFNVSEDEDVESSKTPSGSPESGGFPATGDRKYECQYCCREFANSQALGGHQN 75

Query: 168 AHKKERQQLKRAQMHRTTPATVVYPRN 248
           AHKKERQQLKRAQM  T  A   Y RN
Sbjct: 76  AHKKERQQLKRAQMQATRNAATSYIRN 102


>ref|XP_002314851.1| predicted protein [Populus trichocarpa] gi|222863891|gb|EEF01022.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  105 bits (263), Expect = 3e-21
 Identities = 58/108 (53%), Positives = 67/108 (62%), Gaps = 27/108 (25%)
 Frame = +3

Query: 6   NNNNSRLKIFGFSVSEDVEEHAT------------------------PAMSSTDGKKYEC 113
           N+ ++RLK+FGF+VSED E+  T                        PA +S D +KYEC
Sbjct: 11  NSTSTRLKLFGFNVSEDEEQITTTDSLKSSSCNSPDDSSFATATTTVPATASGDSRKYEC 70

Query: 114 QYCCREFANSQALGGHQNAHKKERQQLKRAQMHRT---TPATVVYPRN 248
           QYCCREFANSQALGGHQNAHKKERQQLKRAQM  T     A V + RN
Sbjct: 71  QYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAAAAAVSFGRN 118


>ref|XP_004169000.1| PREDICTED: zinc finger protein 6-like [Cucumis sativus]
          Length = 229

 Score =  103 bits (256), Expect = 2e-20
 Identities = 57/96 (59%), Positives = 64/96 (66%), Gaps = 14/96 (14%)
 Frame = +3

Query: 3   KNNNNS--RLKIFGFSVSEDVEEH-----ATPAMSSTDG-------KKYECQYCCREFAN 140
           K+N+ +  +LK+FGF V ED  E       TP  SS  G       +KYECQYCCREFAN
Sbjct: 8   KSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCCREFAN 67

Query: 141 SQALGGHQNAHKKERQQLKRAQMHRTTPATVVYPRN 248
           SQALGGHQNAHKKERQQLKRAQ+  T  A V Y RN
Sbjct: 68  SQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRN 103


>ref|XP_004135395.1| PREDICTED: zinc finger protein 6-like [Cucumis sativus]
          Length = 229

 Score =  103 bits (256), Expect = 2e-20
 Identities = 57/96 (59%), Positives = 64/96 (66%), Gaps = 14/96 (14%)
 Frame = +3

Query: 3   KNNNNS--RLKIFGFSVSEDVEEH-----ATPAMSSTDG-------KKYECQYCCREFAN 140
           K+N+ +  +LK+FGF V ED  E       TP  SS  G       +KYECQYCCREFAN
Sbjct: 8   KSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCCREFAN 67

Query: 141 SQALGGHQNAHKKERQQLKRAQMHRTTPATVVYPRN 248
           SQALGGHQNAHKKERQQLKRAQ+  T  A V Y RN
Sbjct: 68  SQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRN 103


Top