BLASTX nr result
ID: Dioscorea21_contig00027508
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00027508
(320 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containi... 137 9e-31
gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japo... 125 3e-27
ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [S... 125 5e-27
tpg|DAA57122.1| TPA: putative NAC domain and pentatricopeptide r... 122 2e-26
tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide r... 122 2e-26
>ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Brachypodium distachyon]
Length = 474
Score = 137 bits (345), Expect = 9e-31
Identities = 65/106 (61%), Positives = 86/106 (81%)
Frame = +2
Query: 2 PTKVTILAVVPAISAVGALGFGESMHAFCDKNGIGLLDVRVENSFIDMYAKCGSIDSSMK 181
PT++T+LAVVPAIS +G + GE++H +C+KNG+ +LD+RV NS ID+YAK GSI SS+K
Sbjct: 224 PTEITVLAVVPAISDIGRILMGETLHGYCEKNGL-VLDIRVGNSLIDLYAKIGSIQSSLK 282
Query: 182 VFERMSWRRNLVSWTSVISAFAMHGMASEAVGLLKEMKQDNVRPNR 319
VF M RRNLVSWTS+IS FAMHG+++EAV L EM++ +RPNR
Sbjct: 283 VFHGMLNRRNLVSWTSIISGFAMHGLSTEAVELFAEMRRSGIRPNR 328
>gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 125 bits (315), Expect = 3e-27
Identities = 59/106 (55%), Positives = 84/106 (79%)
Frame = +2
Query: 2 PTKVTILAVVPAISAVGALGFGESMHAFCDKNGIGLLDVRVENSFIDMYAKCGSIDSSMK 181
P+++T+LAVVPA+S VG + GE++H +C+K G+ + DVRV NS ID+YAK GSI +S++
Sbjct: 219 PSEITVLAVVPALSNVGKILIGEALHGYCEKEGL-VWDVRVGNSLIDLYAKIGSIQNSLR 277
Query: 182 VFERMSWRRNLVSWTSVISAFAMHGMASEAVGLLKEMKQDNVRPNR 319
VF+ M RRNLVSWTS+IS FAMHG++ +AV L +M++ +RPNR
Sbjct: 278 VFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNR 323
Score = 73.2 bits (178), Expect = 2e-11
Identities = 38/105 (36%), Positives = 61/105 (58%)
Frame = +2
Query: 2 PTKVTILAVVPAISAVGALGFGESMHAFCDKNGIGLLDVRVENSFIDMYAKCGSIDSSMK 181
P + I +VV + + +GAL G+ +H + +N I D +ENS IDMY KCGS +++
Sbjct: 783 PDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKA-DTIMENSLIDMYMKCGSAKEALQ 841
Query: 182 VFERMSWRRNLVSWTSVISAFAMHGMASEAVGLLKEMKQDNVRPN 316
VF+ M ++ +SW S+I A +G E++ L + M + RPN
Sbjct: 842 VFKEMK-EKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPN 885
Score = 58.9 bits (141), Expect = 4e-07
Identities = 33/106 (31%), Positives = 58/106 (54%)
Frame = +2
Query: 2 PTKVTILAVVPAISAVGALGFGESMHAFCDKNGIGLLDVRVENSFIDMYAKCGSIDSSMK 181
P +T ++ A + + AL GE MH K G+ L D+ V NS I +YA CG++ +
Sbjct: 550 PDNLTFPFILKACARINALNEGEQMHNHITKLGL-LSDIFVSNSLIHLYAACGNLCYARS 608
Query: 182 VFERMSWRRNLVSWTSVISAFAMHGMASEAVGLLKEMKQDNVRPNR 319
VF+ M +++VSW S+I ++ + + L K M+ + V+ ++
Sbjct: 609 VFDEMV-VKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADK 653
>ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein
SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 125 bits (313), Expect = 5e-27
Identities = 60/106 (56%), Positives = 81/106 (76%)
Frame = +2
Query: 2 PTKVTILAVVPAISAVGALGFGESMHAFCDKNGIGLLDVRVENSFIDMYAKCGSIDSSMK 181
P+++T+LAVVPAIS +G + GE +H +C K GI + D RV NS ID+YAK GS+ +S+K
Sbjct: 70 PSEITVLAVVPAISNLGGILMGEMLHGYCVKKGI-MSDARVGNSLIDLYAKIGSVQNSLK 128
Query: 182 VFERMSWRRNLVSWTSVISAFAMHGMASEAVGLLKEMKQDNVRPNR 319
VF+ M RRNLVSWTS+IS FAMHG++ EA+ L EM++ +RPNR
Sbjct: 129 VFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNR 174
Score = 71.2 bits (173), Expect = 8e-11
Identities = 38/105 (36%), Positives = 60/105 (57%)
Frame = +2
Query: 2 PTKVTILAVVPAISAVGALGFGESMHAFCDKNGIGLLDVRVENSFIDMYAKCGSIDSSMK 181
P V I +V+ A + +GAL G+ +H + +N I D +ENS IDM+AKCG + +++
Sbjct: 641 PDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKT-DTIMENSLIDMFAKCGCMQEALQ 699
Query: 182 VFERMSWRRNLVSWTSVISAFAMHGMASEAVGLLKEMKQDNVRPN 316
VF M ++ +SW S+I A +G EA+ + M + RPN
Sbjct: 700 VFTEME-EKDTLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPN 743
Score = 55.8 bits (133), Expect = 4e-06
Identities = 33/106 (31%), Positives = 56/106 (52%)
Frame = +2
Query: 2 PTKVTILAVVPAISAVGALGFGESMHAFCDKNGIGLLDVRVENSFIDMYAKCGSIDSSMK 181
P +T V+ A + A GE MH+ K G LLD+ V NS I +YA CG + +
Sbjct: 408 PDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGF-LLDIFVSNSLIHLYAACGDLVCARS 466
Query: 182 VFERMSWRRNLVSWTSVISAFAMHGMASEAVGLLKEMKQDNVRPNR 319
+F+ M +++VSW S+I ++ E + L + M+ + V+ ++
Sbjct: 467 IFDEM-LVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADK 511
>tpg|DAA57122.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 868
Score = 122 bits (307), Expect = 2e-26
Identities = 57/106 (53%), Positives = 82/106 (77%)
Frame = +2
Query: 2 PTKVTILAVVPAISAVGALGFGESMHAFCDKNGIGLLDVRVENSFIDMYAKCGSIDSSMK 181
P+++T+LAV+PAIS +G + GE ++ +C+K GI + D RV NS ID+YAK GS+ +S+K
Sbjct: 609 PSEITVLAVIPAISNLGGILMGEMLNGYCEKKGI-MSDARVGNSLIDLYAKIGSVQNSLK 667
Query: 182 VFERMSWRRNLVSWTSVISAFAMHGMASEAVGLLKEMKQDNVRPNR 319
VF+ M RRNLVSWTS+IS FAMHG++ EA+ L EM++ ++PNR
Sbjct: 668 VFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNR 713
>tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 122 bits (307), Expect = 2e-26
Identities = 57/106 (53%), Positives = 82/106 (77%)
Frame = +2
Query: 2 PTKVTILAVVPAISAVGALGFGESMHAFCDKNGIGLLDVRVENSFIDMYAKCGSIDSSMK 181
P+++T+LAV+PAIS +G + GE ++ +C+K GI + D RV NS ID+YAK GS+ +S+K
Sbjct: 609 PSEITVLAVIPAISNLGGILMGEMLNGYCEKKGI-MSDARVGNSLIDLYAKIGSVQNSLK 667
Query: 182 VFERMSWRRNLVSWTSVISAFAMHGMASEAVGLLKEMKQDNVRPNR 319
VF+ M RRNLVSWTS+IS FAMHG++ EA+ L EM++ ++PNR
Sbjct: 668 VFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNR 713
Score = 71.2 bits (173), Expect = 8e-11
Identities = 38/105 (36%), Positives = 60/105 (57%)
Frame = +2
Query: 2 PTKVTILAVVPAISAVGALGFGESMHAFCDKNGIGLLDVRVENSFIDMYAKCGSIDSSMK 181
P V I +V+ A + +GAL G+ +H + +N I D +ENS IDM+AKCG + +++
Sbjct: 1171 PDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKA-DTIMENSLIDMFAKCGCVQEALQ 1229
Query: 182 VFERMSWRRNLVSWTSVISAFAMHGMASEAVGLLKEMKQDNVRPN 316
VF M ++ +SW S+I A +G EA+ + M + RPN
Sbjct: 1230 VFTDME-EKDTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRPN 1273
Score = 58.5 bits (140), Expect = 5e-07
Identities = 36/106 (33%), Positives = 56/106 (52%)
Frame = +2
Query: 2 PTKVTILAVVPAISAVGALGFGESMHAFCDKNGIGLLDVRVENSFIDMYAKCGSIDSSMK 181
P +T V+ A + A GE MH K G LLD+ V NS I +YA CG++ +
Sbjct: 938 PDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGF-LLDIFVSNSLIYLYAACGALACARS 996
Query: 182 VFERMSWRRNLVSWTSVISAFAMHGMASEAVGLLKEMKQDNVRPNR 319
VF M +++VSW S+I ++ H E + L K M+ + V+ ++
Sbjct: 997 VFNEM-LVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADK 1041