BLASTX nr result
ID: Dioscorea21_contig00027507
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00027507
(693 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containi... 235 7e-60
gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japo... 226 3e-57
emb|CBI23162.3| unnamed protein product [Vitis vinifera] 224 1e-56
ref|XP_002265471.1| PREDICTED: pentatricopeptide repeat-containi... 224 1e-56
emb|CAN79717.1| hypothetical protein VITISV_027522 [Vitis vinifera] 224 1e-56
>ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Brachypodium distachyon]
Length = 474
Score = 235 bits (599), Expect = 7e-60
Identities = 117/232 (50%), Positives = 161/232 (69%), Gaps = 2/232 (0%)
Frame = +1
Query: 1 HQPKRHPSLQVHAQLLTTAL--HRPPLHHAAVLVWNTLLRHYSLGPSPQEAIYLYHQMQH 174
HQ KR LQ+H+QL+ + RP W+ LL+ YS GP PQEA+ L+ H
Sbjct: 36 HQAKRRQLLQIHSQLVAHQVFDRRPT-------PWHALLKAYSHGPFPQEALNLFRDA-H 87
Query: 175 LLITTNSFTFSFLLKACANLSSLRQGSQLHALVVKRGFESNVYVHTSLLDMYVCCRALVD 354
+ +++ F F L+ACA L+ G+QLH LV+++GFE + YVHTSL++ YV C LVD
Sbjct: 88 RNMADDTYAFMFSLRACAGLAWPWTGAQLHGLVIRKGFEFHAYVHTSLINTYVVCGCLVD 147
Query: 355 ARKVFDEMPERNAVTWNVIITGLARHGEISMAWALFQQMPERNAIAWTGMIDGYTRARRP 534
AR FDEMP +N V+WNV+ITG A GEI A LF++MP RN ++WTG+IDGYTR+
Sbjct: 148 ARMAFDEMPVKNVVSWNVMITGFAGRGEIEYARLLFERMPSRNVVSWTGLIDGYTRSCHS 207
Query: 535 VEALSLLVQMLAEGVSPTEVTILAVVPAVSTVGALGFGESMHAFCVKNGIGL 690
VEA++LL +M+AEG+SPTE+T+LAVVPA+S +G + GE++H +C KNG+ L
Sbjct: 208 VEAVALLRRMMAEGISPTEITVLAVVPAISDIGRILMGETLHGYCEKNGLVL 259
Score = 62.4 bits (150), Expect = 8e-08
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 1/188 (0%)
Frame = +1
Query: 88 VLVWNTLLRHYSLGPSPQEAIYLYHQMQHLLITTNSFTFSFLLKACANLSSLRQGSQLHA 267
V+ W L+ Y+ EA+ L +M I+ T ++ A +++ + G LH
Sbjct: 191 VVSWTGLIDGYTRSCHSVEAVALLRRMMAEGISPTEITVLAVVPAISDIGRILMGETLHG 250
Query: 268 LVVKRGFESNVYVHTSLLDMYVCCRALVDARKVFDEM-PERNAVTWNVIITGLARHGEIS 444
K G ++ V SL+D+Y ++ + KVF M RN V+W II+G A HG
Sbjct: 251 YCEKNGLVLDIRVGNSLIDLYAKIGSIQSSLKVFHGMLNRRNLVSWTSIISGFAMHG--- 307
Query: 445 MAWALFQQMPERNAIAWTGMIDGYTRARRPVEALSLLVQMLAEGVSPTEVTILAVVPAVS 624
EA+ L +M G+ P VT L+V+ A S
Sbjct: 308 ----------------------------LSTEAVELFAEMRRSGIRPNRVTFLSVLNACS 339
Query: 625 TVGALGFG 648
G + G
Sbjct: 340 HGGLVEQG 347
>gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 226 bits (577), Expect = 3e-57
Identities = 115/231 (49%), Positives = 159/231 (68%), Gaps = 3/231 (1%)
Frame = +1
Query: 1 HQPKRHPSLQVHAQLLTTAL--HRPPLHHAAVLVWNTLLRHYSLGPSPQEAIYLY-HQMQ 171
HQ +R LQ+H+QL+ + RP W+ LL+ YS GP PQ+A+ L+ H
Sbjct: 31 HQDRRRQLLQIHSQLIAHQVFDRRPT-------PWHALLKAYSHGPHPQDALQLFRHARW 83
Query: 172 HLLITTNSFTFSFLLKACANLSSLRQGSQLHALVVKRGFESNVYVHTSLLDMYVCCRALV 351
H T +FTF+ LKACA L R QLH LVV++GFE YVHT+L+++Y+ C L
Sbjct: 84 HAADDTYAFTFA--LKACAGLGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLA 141
Query: 352 DARKVFDEMPERNAVTWNVIITGLARHGEISMAWALFQQMPERNAIAWTGMIDGYTRARR 531
D+R F+EMP +NAV+WNV+ITG A GE+ A LF++MP RN ++W+GMIDGYTRA R
Sbjct: 142 DSRMAFEEMPVKNAVSWNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACR 201
Query: 532 PVEALSLLVQMLAEGVSPTEVTILAVVPAVSTVGALGFGESMHAFCVKNGI 684
PVEA++L +M+AEG+SP+E+T+LAVVPA+S VG + GE++H +C K G+
Sbjct: 202 PVEAVALFRRMMAEGISPSEITVLAVVPALSNVGKILIGEALHGYCEKEGL 252
Score = 99.0 bits (245), Expect = 8e-19
Identities = 59/199 (29%), Positives = 101/199 (50%)
Frame = +1
Query: 88 VLVWNTLLRHYSLGPSPQEAIYLYHQMQHLLITTNSFTFSFLLKACANLSSLRQGSQLHA 267
V+ WN+L+ YS ++ + L+ MQ+ + + T ++ AC L +
Sbjct: 618 VVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVR 677
Query: 268 LVVKRGFESNVYVHTSLLDMYVCCRALVDARKVFDEMPERNAVTWNVIITGLARHGEISM 447
+ E +VY+ +L+D + L A KVF M RN VT N +I A+ +I
Sbjct: 678 YIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVS 737
Query: 448 AWALFQQMPERNAIAWTGMIDGYTRARRPVEALSLLVQMLAEGVSPTEVTILAVVPAVST 627
A +F Q+P+++ I+W+ MI GY++A +AL + QM V P + I +VV + +
Sbjct: 738 ARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAH 797
Query: 628 VGALGFGESMHAFCVKNGI 684
+GAL G+ +H + +N I
Sbjct: 798 LGALDLGKWVHEYVRRNNI 816
Score = 96.7 bits (239), Expect = 4e-18
Identities = 57/188 (30%), Positives = 92/188 (48%)
Frame = +1
Query: 94 VWNTLLRHYSLGPSPQEAIYLYHQMQHLLITTNSFTFSFLLKACANLSSLRQGSQLHALV 273
+WN L+R + +P +AI Y + Q + ++ TF F+LKACA +++L +G Q+H +
Sbjct: 519 LWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHI 578
Query: 274 VKRGFESNVYVHTSLLDMYVCCRALVDARKVFDEMPERNAVTWNVIITGLARHGEISMAW 453
K G S+++V SL+ +Y C L AR VFDEM ++ V+WN
Sbjct: 579 TKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWN---------------- 622
Query: 454 ALFQQMPERNAIAWTGMIDGYTRARRPVEALSLLVQMLAEGVSPTEVTILAVVPAVSTVG 633
+I GY++ R + L+L M EGV +VT++ VV A + +G
Sbjct: 623 ---------------SLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLG 667
Query: 634 ALGFGESM 657
+ M
Sbjct: 668 DYSMADYM 675
Score = 81.3 bits (199), Expect = 2e-13
Identities = 43/157 (27%), Positives = 84/157 (53%), Gaps = 4/157 (2%)
Frame = +1
Query: 88 VLVWNTLLRHYSLGPSPQEAIYLYHQMQHLLITTNSFTFSFLLKACANLSSLRQGSQLHA 267
++ W++++ YS +A+ ++ QMQ + ++ + ++ +CA+L +L G +H
Sbjct: 750 LISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHE 809
Query: 268 LVVKRGFESNVYVHTSLLDMYVCCRALVDARKVFDEMPERNAVTWNVIITGLARHGEISM 447
V + +++ + SL+DMY+ C + +A +VF EM E++ ++WN II GLA +G
Sbjct: 810 YVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKE 869
Query: 448 AWALFQQMPER----NAIAWTGMIDGYTRARRPVEAL 546
+ LFQ M N + + G++ A+ E L
Sbjct: 870 SLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGL 906
Score = 71.2 bits (173), Expect = 2e-10
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 1/188 (0%)
Frame = +1
Query: 88 VLVWNTLLRHYSLGPSPQEAIYLYHQMQHLLITTNSFTFSFLLKACANLSSLRQGSQLHA 267
V+ W+ ++ Y+ P EA+ L+ +M I+ + T ++ A +N+ + G LH
Sbjct: 186 VVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVVPALSNVGKILIGEALHG 245
Query: 268 LVVKRGFESNVYVHTSLLDMYVCCRALVDARKVFDEM-PERNAVTWNVIITGLARHGEIS 444
K G +V V SL+D+Y ++ ++ +VFDEM RN V+W II+G A HG
Sbjct: 246 YCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTSIISGFAMHG--- 302
Query: 445 MAWALFQQMPERNAIAWTGMIDGYTRARRPVEALSLLVQMLAEGVSPTEVTILAVVPAVS 624
V+A+ L M G+ P +T L+V+ A S
Sbjct: 303 ----------------------------LSVKAVELFADMRRAGIRPNRITFLSVLHACS 334
Query: 625 TVGALGFG 648
G + G
Sbjct: 335 HGGLVEQG 342
>emb|CBI23162.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 224 bits (571), Expect = 1e-56
Identities = 115/232 (49%), Positives = 159/232 (68%), Gaps = 5/232 (2%)
Frame = +1
Query: 4 QPKRHPSLQVHAQLLTTALHRPPLHHAAVLVWNTLLRHYSLGPSPQEAIYLYHQMQ--HL 177
Q +R Q+H+ L+TT H H V WN LLRHYSLG PQEA L+ ++ H+
Sbjct: 26 QTRRSAMQQLHSHLITTGAHS---HCMDVTSWNVLLRHYSLGIFPQEAFLLFRHLRLHHV 82
Query: 178 L--ITTNSFTFSFLLKACANLSSLRQGSQLHALVVKRGFESNVYVHTSLLDMYVCCRALV 351
++ +SF+FSFLLKACANL G QLHAL +K GFE +VYVHT LL++Y C A +
Sbjct: 83 YPPLSFDSFSFSFLLKACANLQHREGGLQLHALTLKLGFEFHVYVHTVLLNVYAACGAFL 142
Query: 352 DARKVFDEMPERNAVTWNVIITGLARHGEISMAWALFQQMPERNAIAWTGMIDGYTRARR 531
+A++VFDEMP RN+VTWNV ITGLA+ GE+ +A +L +MP ++WT +IDGYTR +
Sbjct: 143 EAKQVFDEMPVRNSVTWNVFITGLAKWGELHLACSLLDEMPRPTVVSWTTIIDGYTRMNQ 202
Query: 532 PVEALSLLVQM-LAEGVSPTEVTILAVVPAVSTVGALGFGESMHAFCVKNGI 684
P +AL+L + M L EG+ PTE+T+LA+ PA+S +GAL + +H + K+G+
Sbjct: 203 PKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGALEICQLIHTYGEKSGL 254
Score = 63.9 bits (154), Expect = 3e-08
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 9/199 (4%)
Frame = +1
Query: 88 VLVWNTLLRHYSLGPSPQEAIYLYHQM-QHLLITTNSFTFSFLLKACANLSSLRQGSQLH 264
V+ W T++ Y+ P++A+ L+ M I T + A +NL +L +H
Sbjct: 187 VVSWTTIIDGYTRMNQPKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGALEICQLIH 246
Query: 265 ALVVKRGFE-SNVYVHTSLLDMYVCCRALVDARKVFDEMPE--RNAVTWNVIITGLARHG 435
K G S++ + TSLLD Y C + A VF E+ RN V+W II+ A HG
Sbjct: 247 TYGEKSGLNASDIRIRTSLLDTYAKCGCIESASGVFGEIAAKGRNLVSWTSIISAFAMHG 306
Query: 436 EISMAWALFQQMPER----NAIAWTGMIDGYTRARRPVEALSLLVQMLAE-GVSPTEVTI 600
A F++M + N I + +++ + E L L +M+ E +SP
Sbjct: 307 MAKEALENFERMQKECLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQISPDVKHY 366
Query: 601 LAVVPAVSTVGALGFGESM 657
++ + G L E M
Sbjct: 367 GCLIDMLGRAGRLDEAEKM 385
>ref|XP_002265471.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Vitis vinifera]
Length = 470
Score = 224 bits (571), Expect = 1e-56
Identities = 115/232 (49%), Positives = 159/232 (68%), Gaps = 5/232 (2%)
Frame = +1
Query: 4 QPKRHPSLQVHAQLLTTALHRPPLHHAAVLVWNTLLRHYSLGPSPQEAIYLYHQMQ--HL 177
Q +R Q+H+ L+TT H H V WN LLRHYSLG PQEA L+ ++ H+
Sbjct: 26 QTRRSAMQQLHSHLITTGAHS---HCMDVTSWNVLLRHYSLGIFPQEAFLLFRHLRLHHV 82
Query: 178 L--ITTNSFTFSFLLKACANLSSLRQGSQLHALVVKRGFESNVYVHTSLLDMYVCCRALV 351
++ +SF+FSFLLKACANL G QLHAL +K GFE +VYVHT LL++Y C A +
Sbjct: 83 YPPLSFDSFSFSFLLKACANLQHREGGLQLHALTLKLGFEFHVYVHTVLLNVYAACGAFL 142
Query: 352 DARKVFDEMPERNAVTWNVIITGLARHGEISMAWALFQQMPERNAIAWTGMIDGYTRARR 531
+A++VFDEMP RN+VTWNV ITGLA+ GE+ +A +L +MP ++WT +IDGYTR +
Sbjct: 143 EAKQVFDEMPVRNSVTWNVFITGLAKWGELHLACSLLDEMPRPTVVSWTTIIDGYTRMNQ 202
Query: 532 PVEALSLLVQM-LAEGVSPTEVTILAVVPAVSTVGALGFGESMHAFCVKNGI 684
P +AL+L + M L EG+ PTE+T+LA+ PA+S +GAL + +H + K+G+
Sbjct: 203 PKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGALEICQLIHTYGEKSGL 254
Score = 63.9 bits (154), Expect = 3e-08
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 9/199 (4%)
Frame = +1
Query: 88 VLVWNTLLRHYSLGPSPQEAIYLYHQM-QHLLITTNSFTFSFLLKACANLSSLRQGSQLH 264
V+ W T++ Y+ P++A+ L+ M I T + A +NL +L +H
Sbjct: 187 VVSWTTIIDGYTRMNQPKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGALEICQLIH 246
Query: 265 ALVVKRGFE-SNVYVHTSLLDMYVCCRALVDARKVFDEMPE--RNAVTWNVIITGLARHG 435
K G S++ + TSLLD Y C + A VF E+ RN V+W II+ A HG
Sbjct: 247 TYGEKSGLNASDIRIRTSLLDTYAKCGCIESASGVFGEIAAKGRNLVSWTSIISAFAMHG 306
Query: 436 EISMAWALFQQMPER----NAIAWTGMIDGYTRARRPVEALSLLVQMLAE-GVSPTEVTI 600
A F++M + N I + +++ + E L L +M+ E +SP
Sbjct: 307 MAKEALENFERMQKECLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQISPDVKHY 366
Query: 601 LAVVPAVSTVGALGFGESM 657
++ + G L E M
Sbjct: 367 GCLIDMLGRAGRLDEAEKM 385
>emb|CAN79717.1| hypothetical protein VITISV_027522 [Vitis vinifera]
Length = 610
Score = 224 bits (571), Expect = 1e-56
Identities = 115/232 (49%), Positives = 159/232 (68%), Gaps = 5/232 (2%)
Frame = +1
Query: 4 QPKRHPSLQVHAQLLTTALHRPPLHHAAVLVWNTLLRHYSLGPSPQEAIYLYHQMQ--HL 177
Q +R Q+H+ L+TT H H V WN LLRHYSLG PQEA L+ ++ H+
Sbjct: 26 QTRRSAMQQLHSHLITTGAHS---HCMDVTSWNVLLRHYSLGIFPQEAFLLFRHLRLHHV 82
Query: 178 L--ITTNSFTFSFLLKACANLSSLRQGSQLHALVVKRGFESNVYVHTSLLDMYVCCRALV 351
++ +SF+FSFLLKACANL G QLHAL +K GFE +VYVHT LL++Y C A +
Sbjct: 83 YPPLSFDSFSFSFLLKACANLQHREGGLQLHALTLKLGFEFHVYVHTVLLNVYAACGAFL 142
Query: 352 DARKVFDEMPERNAVTWNVIITGLARHGEISMAWALFQQMPERNAIAWTGMIDGYTRARR 531
+A++VFDEMP RN+VTWNV ITGLA+ GE+ +A +L +MP ++WT +IDGYTR +
Sbjct: 143 EAKQVFDEMPVRNSVTWNVFITGLAKWGELHLACSLLDEMPRPTVVSWTTIIDGYTRMNQ 202
Query: 532 PVEALSLLVQM-LAEGVSPTEVTILAVVPAVSTVGALGFGESMHAFCVKNGI 684
P +AL+L + M L EG+ PTE+T+LA+ PA+S +GAL + +H + K+G+
Sbjct: 203 PKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGALEICQLIHTYGEKSGL 254
Score = 63.9 bits (154), Expect = 3e-08
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 9/199 (4%)
Frame = +1
Query: 88 VLVWNTLLRHYSLGPSPQEAIYLYHQM-QHLLITTNSFTFSFLLKACANLSSLRQGSQLH 264
V+ W T++ Y+ P++A+ L+ M I T + A +NL +L +H
Sbjct: 187 VVSWTTIIDGYTRMNQPKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGALEICQLIH 246
Query: 265 ALVVKRGFE-SNVYVHTSLLDMYVCCRALVDARKVFDEMPE--RNAVTWNVIITGLARHG 435
K G S++ + TSLLD Y C + A VF E+ RN V+W II+ A HG
Sbjct: 247 TYGEKSGLNASDIRIRTSLLDTYAKCGCIESASGVFGEIAAKGRNLVSWTSIISAFAMHG 306
Query: 436 EISMAWALFQQMPER----NAIAWTGMIDGYTRARRPVEALSLLVQMLAE-GVSPTEVTI 600
A F++M + N I + +++ + E L L +M+ E +SP
Sbjct: 307 MAKEALENFERMQKECLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQISPDVKHY 366
Query: 601 LAVVPAVSTVGALGFGESM 657
++ + G L E M
Sbjct: 367 GCLIDMLGRAGRLDEAEKM 385