BLASTX nr result

ID: Dioscorea21_contig00027192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027192
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    82   5e-14
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]    82   5e-14
ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group] g...    82   6e-14
gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza...    82   6e-14
ref|XP_002520538.1| zinc finger protein, putative [Ricinus commu...    80   1e-13

>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/58 (72%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = +1

Query: 49  SGDRSPFNPVIVLRGTPERGI-EPDRTPSSSFELYYDDGAGSGLRPIPASMSDFLMGS 219
           +GDRSPFNPVIVLRG  + G  E      SSFELYYDDGAGSGLRP+PA+MS+FLMGS
Sbjct: 82  AGDRSPFNPVIVLRGPADGGGGEGGVVERSSFELYYDDGAGSGLRPLPATMSEFLMGS 139


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/58 (72%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = +1

Query: 49  SGDRSPFNPVIVLRGTPERGI-EPDRTPSSSFELYYDDGAGSGLRPIPASMSDFLMGS 219
           +GDRSPFNPVIVLRG  + G  E      SSFELYYDDGAGSGLRP+PA+MS+FLMGS
Sbjct: 192 AGDRSPFNPVIVLRGPADGGGGEGGVVERSSFELYYDDGAGSGLRPLPATMSEFLMGS 249


>ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group]
           gi|52353630|gb|AAU44196.1| putative ring-H2 finger
           protein [Oryza sativa Japonica Group]
           gi|255675945|dbj|BAF16351.2| Os05g0110000 [Oryza sativa
           Japonica Group]
          Length = 333

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/60 (66%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
 Frame = +1

Query: 43  ATSGDRSPFNPVIVLRGTPERGIEPDR-TPSSSFELYYDDGAGSGLRPIPASMSDFLMGS 219
           A +GDRSPFNPVIVLR +P    + D    ++SFEL+YDDGAGSGLRP+P +MSDFLMGS
Sbjct: 34  AAAGDRSPFNPVIVLRRSPAAAGDDDSLAAATSFELFYDDGAGSGLRPLPETMSDFLMGS 93


>gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza sativa]
          Length = 386

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/60 (66%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
 Frame = +1

Query: 43  ATSGDRSPFNPVIVLRGTPERGIEPDR-TPSSSFELYYDDGAGSGLRPIPASMSDFLMGS 219
           A +GDRSPFNPVIVLR +P    + D    ++SFEL+YDDGAGSGLRP+P +MSDFLMGS
Sbjct: 87  AAAGDRSPFNPVIVLRRSPAAAGDDDSLAAATSFELFYDDGAGSGLRPLPETMSDFLMGS 146


>ref|XP_002520538.1| zinc finger protein, putative [Ricinus communis]
           gi|223540380|gb|EEF41951.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 318

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/60 (68%), Positives = 48/60 (80%), Gaps = 3/60 (5%)
 Frame = +1

Query: 49  SGDRSPFNPVIVLRGT---PERGIEPDRTPSSSFELYYDDGAGSGLRPIPASMSDFLMGS 219
           +GDRSPFNPVIVLRG+   PE   E     +SS+E YYDDG+GSGLRP+PASMS+FLMGS
Sbjct: 92  NGDRSPFNPVIVLRGSTASPEENSEEGGN-NSSYEFYYDDGSGSGLRPVPASMSEFLMGS 150


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