BLASTX nr result
ID: Dioscorea21_contig00027192
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00027192 (221 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 82 5e-14 emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera] 82 5e-14 ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group] g... 82 6e-14 gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza... 82 6e-14 ref|XP_002520538.1| zinc finger protein, putative [Ricinus commu... 80 1e-13 >ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera] Length = 388 Score = 82.0 bits (201), Expect = 5e-14 Identities = 42/58 (72%), Positives = 47/58 (81%), Gaps = 1/58 (1%) Frame = +1 Query: 49 SGDRSPFNPVIVLRGTPERGI-EPDRTPSSSFELYYDDGAGSGLRPIPASMSDFLMGS 219 +GDRSPFNPVIVLRG + G E SSFELYYDDGAGSGLRP+PA+MS+FLMGS Sbjct: 82 AGDRSPFNPVIVLRGPADGGGGEGGVVERSSFELYYDDGAGSGLRPLPATMSEFLMGS 139 >emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera] Length = 1218 Score = 82.0 bits (201), Expect = 5e-14 Identities = 42/58 (72%), Positives = 47/58 (81%), Gaps = 1/58 (1%) Frame = +1 Query: 49 SGDRSPFNPVIVLRGTPERGI-EPDRTPSSSFELYYDDGAGSGLRPIPASMSDFLMGS 219 +GDRSPFNPVIVLRG + G E SSFELYYDDGAGSGLRP+PA+MS+FLMGS Sbjct: 192 AGDRSPFNPVIVLRGPADGGGGEGGVVERSSFELYYDDGAGSGLRPLPATMSEFLMGS 249 >ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group] gi|52353630|gb|AAU44196.1| putative ring-H2 finger protein [Oryza sativa Japonica Group] gi|255675945|dbj|BAF16351.2| Os05g0110000 [Oryza sativa Japonica Group] Length = 333 Score = 81.6 bits (200), Expect = 6e-14 Identities = 40/60 (66%), Positives = 48/60 (80%), Gaps = 1/60 (1%) Frame = +1 Query: 43 ATSGDRSPFNPVIVLRGTPERGIEPDR-TPSSSFELYYDDGAGSGLRPIPASMSDFLMGS 219 A +GDRSPFNPVIVLR +P + D ++SFEL+YDDGAGSGLRP+P +MSDFLMGS Sbjct: 34 AAAGDRSPFNPVIVLRRSPAAAGDDDSLAAATSFELFYDDGAGSGLRPLPETMSDFLMGS 93 >gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza sativa] Length = 386 Score = 81.6 bits (200), Expect = 6e-14 Identities = 40/60 (66%), Positives = 48/60 (80%), Gaps = 1/60 (1%) Frame = +1 Query: 43 ATSGDRSPFNPVIVLRGTPERGIEPDR-TPSSSFELYYDDGAGSGLRPIPASMSDFLMGS 219 A +GDRSPFNPVIVLR +P + D ++SFEL+YDDGAGSGLRP+P +MSDFLMGS Sbjct: 87 AAAGDRSPFNPVIVLRRSPAAAGDDDSLAAATSFELFYDDGAGSGLRPLPETMSDFLMGS 146 >ref|XP_002520538.1| zinc finger protein, putative [Ricinus communis] gi|223540380|gb|EEF41951.1| zinc finger protein, putative [Ricinus communis] Length = 318 Score = 80.5 bits (197), Expect = 1e-13 Identities = 41/60 (68%), Positives = 48/60 (80%), Gaps = 3/60 (5%) Frame = +1 Query: 49 SGDRSPFNPVIVLRGT---PERGIEPDRTPSSSFELYYDDGAGSGLRPIPASMSDFLMGS 219 +GDRSPFNPVIVLRG+ PE E +SS+E YYDDG+GSGLRP+PASMS+FLMGS Sbjct: 92 NGDRSPFNPVIVLRGSTASPEENSEEGGN-NSSYEFYYDDGSGSGLRPVPASMSEFLMGS 150