BLASTX nr result

ID: Dioscorea21_contig00027091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00027091
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001152178.1| ribonuclease P [Zea mays] gi|195653597|gb|AC...   196   5e-48
gb|ACF83752.1| unknown [Zea mays] gi|238010046|gb|ACR36058.1| un...   195   7e-48
gb|ACF81956.1| unknown [Zea mays] gi|194697364|gb|ACF82766.1| un...   193   3e-47
ref|XP_003562602.1| PREDICTED: uncharacterized protein LOC100824...   188   1e-45
ref|NP_001060394.1| Os07g0636400 [Oryza sativa Japonica Group] g...   175   1e-41

>ref|NP_001152178.1| ribonuclease P [Zea mays] gi|195653597|gb|ACG46266.1| ribonuclease
           P [Zea mays]
          Length = 186

 Score =  196 bits (497), Expect = 5e-48
 Identities = 102/174 (58%), Positives = 131/174 (75%), Gaps = 4/174 (2%)
 Frame = -2

Query: 624 KKKSRADLKDATKVPEQE-SSNFYDKERLDDLLAKIKRSIELAKELKGPLPEKIWIKQQF 448
           KK+   D  ++ K  EQ  +S+F   + LDDLL+K+ RS+E+AK  +G LPEKIW+KQQF
Sbjct: 3   KKRKHLDPANSLKDSEQVVASDFIRGDDLDDLLSKLIRSVEIAKASRGGLPEKIWMKQQF 62

Query: 447 AIGVNDVTRVLERMPHDVLT---VKSTSKPANGPLRRAPLVPLQAVIVALDCNPRWLVKH 277
           AIGVNDVTRVLERMPH V       S+  P     R+APLVPLQAV+VA DCNP+WL KH
Sbjct: 63  AIGVNDVTRVLERMPHSVTAHPAQMSSGAPTVSGRRQAPLVPLQAVLVAADCNPKWLTKH 122

Query: 276 IPSLSSSRQVPVISIKDSKRGSLRLGELVNLKTAMVIGVKAKGSKINETIDAIL 115
           IP+L+S+RQVPV+ +KD+K GS+RLG +VN++TA+ IGVKAK S +N+TID  L
Sbjct: 123 IPTLASTRQVPVLCVKDNKGGSVRLGHVVNVRTALAIGVKAKDSVLNKTIDEFL 176


>gb|ACF83752.1| unknown [Zea mays] gi|238010046|gb|ACR36058.1| unknown [Zea mays]
           gi|414887801|tpg|DAA63815.1| TPA: ribonuclease P isoform
           1 [Zea mays] gi|414887802|tpg|DAA63816.1| TPA:
           ribonuclease P isoform 2 [Zea mays]
          Length = 186

 Score =  195 bits (496), Expect = 7e-48
 Identities = 102/174 (58%), Positives = 130/174 (74%), Gaps = 4/174 (2%)
 Frame = -2

Query: 624 KKKSRADLKDATKVPEQE-SSNFYDKERLDDLLAKIKRSIELAKELKGPLPEKIWIKQQF 448
           KK+   D  ++ K  EQ  +S+F   + LDDLL+K+ RS+E+AK  +G LPEKIW+KQQF
Sbjct: 3   KKRKHLDPANSLKDSEQVVASDFIRGDDLDDLLSKLIRSVEIAKASRGGLPEKIWMKQQF 62

Query: 447 AIGVNDVTRVLERMPHDVLT---VKSTSKPANGPLRRAPLVPLQAVIVALDCNPRWLVKH 277
           AIGVNDVTRVLERMPH V       S   P     R+APLVPLQAV+VA DCNP+WL KH
Sbjct: 63  AIGVNDVTRVLERMPHSVTAHPAQMSNEAPTVSGRRQAPLVPLQAVLVAADCNPKWLTKH 122

Query: 276 IPSLSSSRQVPVISIKDSKRGSLRLGELVNLKTAMVIGVKAKGSKINETIDAIL 115
           IP+L+S+RQVPV+ +KD+K GS+RLG +VN++TA+ IGVKAK S +N+TID  L
Sbjct: 123 IPTLASTRQVPVLCVKDNKGGSVRLGHVVNVRTALAIGVKAKDSVLNKTIDEFL 176


>gb|ACF81956.1| unknown [Zea mays] gi|194697364|gb|ACF82766.1| unknown [Zea mays]
           gi|414887798|tpg|DAA63812.1| TPA: hypothetical protein
           ZEAMMB73_297716 [Zea mays] gi|414887799|tpg|DAA63813.1|
           TPA: hypothetical protein ZEAMMB73_297716 [Zea mays]
          Length = 186

 Score =  193 bits (490), Expect = 3e-47
 Identities = 101/174 (58%), Positives = 130/174 (74%), Gaps = 4/174 (2%)
 Frame = -2

Query: 624 KKKSRADLKDATKVPEQE-SSNFYDKERLDDLLAKIKRSIELAKELKGPLPEKIWIKQQF 448
           KK+   D  ++ K  EQ  +S+F   + LDDLL+K+ RS+E+AK  +G LPEKIW+KQQF
Sbjct: 3   KKRKHLDPANSLKDSEQVVASDFIRGDDLDDLLSKLIRSVEIAKASRGRLPEKIWMKQQF 62

Query: 447 AIGVNDVTRVLERMPHDVLT---VKSTSKPANGPLRRAPLVPLQAVIVALDCNPRWLVKH 277
           AIGVNDVTRVLERMPH V       S+  P     R+APLVPLQAV+VA DCNP+WL KH
Sbjct: 63  AIGVNDVTRVLERMPHSVTAHPAQMSSEAPTVSGQRQAPLVPLQAVLVAADCNPKWLTKH 122

Query: 276 IPSLSSSRQVPVISIKDSKRGSLRLGELVNLKTAMVIGVKAKGSKINETIDAIL 115
           IP+L+ +RQVPV+ +KD+K GS+RLG +VN++TA+ IGVKAK S +N+TID  L
Sbjct: 123 IPTLAFTRQVPVLCMKDNKGGSVRLGHVVNVRTALAIGVKAKDSVVNKTIDEFL 176


>ref|XP_003562602.1| PREDICTED: uncharacterized protein LOC100824571 [Brachypodium
           distachyon]
          Length = 200

 Score =  188 bits (477), Expect = 1e-45
 Identities = 98/185 (52%), Positives = 136/185 (73%), Gaps = 9/185 (4%)
 Frame = -2

Query: 633 MGRKKKSRA----DLKDATKVPEQESSNFYDKERLDDLLAKIKRSIELAKELKGPLPEKI 466
           MG+KK         LKDA + P   SS++   + LDDLL K+ RS+E+AK  +G LPEKI
Sbjct: 1   MGKKKSKPQRPIKSLKDAEQAP---SSDYIGGDALDDLLLKLTRSVEVAKASRGGLPEKI 57

Query: 465 WIKQQFAIGVNDVTRVLERMP-----HDVLTVKSTSKPANGPLRRAPLVPLQAVIVALDC 301
           W+KQQF+IGVNDVTRVLERMP     H   ++++ +  A   LRRAPLVPLQAV++A DC
Sbjct: 58  WMKQQFSIGVNDVTRVLERMPAAAASHSGCSIEALTGKA---LRRAPLVPLQAVLIAADC 114

Query: 300 NPRWLVKHIPSLSSSRQVPVISIKDSKRGSLRLGELVNLKTAMVIGVKAKGSKINETIDA 121
           NP+WL KHIP+L+S+R+VP++ +KD+K  SLRLG++ +++TA+ IG+KA+ S IN+TID 
Sbjct: 115 NPKWLTKHIPTLASTREVPILCLKDNKGSSLRLGQVADVRTALAIGIKARDSIINKTIDE 174

Query: 120 ILSGN 106
           +L  +
Sbjct: 175 VLKSS 179


>ref|NP_001060394.1| Os07g0636400 [Oryza sativa Japonica Group]
           gi|33146719|dbj|BAC79524.1| RNaseP-associated
           protein-like [Oryza sativa Japonica Group]
           gi|113611930|dbj|BAF22308.1| Os07g0636400 [Oryza sativa
           Japonica Group]
          Length = 189

 Score =  175 bits (443), Expect = 1e-41
 Identities = 93/176 (52%), Positives = 126/176 (71%), Gaps = 5/176 (2%)
 Frame = -2

Query: 627 RKKKSRADLKDATKVPEQE-SSNFYDKERLDDLLAKIKRSIELAKELKGPLPEKIWIKQQ 451
           +K KS+  +K   K  EQ  +S++   + LDDLL+K+ +S+E+AK  +  LPEKIW+K+Q
Sbjct: 4   KKNKSQLPIKAPLKDAEQGITSDYIGGDALDDLLSKLIKSVEVAKASREGLPEKIWMKRQ 63

Query: 450 FAIGVNDVTRVLERMPHDVLTV----KSTSKPANGPLRRAPLVPLQAVIVALDCNPRWLV 283
           FA+GVNDVTRVLERMP           ST    +  L RAP V LQ V+VA DCNP+WL 
Sbjct: 64  FAVGVNDVTRVLERMPAATAATHSGHSSTEAITDKALCRAPPVLLQVVLVAADCNPKWLT 123

Query: 282 KHIPSLSSSRQVPVISIKDSKRGSLRLGELVNLKTAMVIGVKAKGSKINETIDAIL 115
           KHIP+L+S+RQVPV+ +KD+K  SLRLG++VN++TA+ IGVKA+ S IN+ ID +L
Sbjct: 124 KHIPTLASTRQVPVLCLKDNKESSLRLGQVVNVRTALAIGVKARDSIINKAIDEVL 179


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