BLASTX nr result

ID: Dioscorea21_contig00026848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026848
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACG41065.1| elongation factor P [Zea mays]                         335   9e-90
ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|...   335   1e-89
ref|XP_002463696.1| hypothetical protein SORBIDRAFT_01g004430 [S...   333   3e-89
gb|AAP21425.1| putative translation elongation factor P [Oryza s...   327   2e-87
ref|XP_003559276.1| PREDICTED: elongation factor P-like [Brachyp...   318   8e-85

>gb|ACG41065.1| elongation factor P [Zea mays]
          Length = 246

 Score =  335 bits (859), Expect = 9e-90
 Identities = 170/250 (68%), Positives = 202/250 (80%), Gaps = 5/250 (2%)
 Frame = -1

Query: 876 MRRFGRKAAQY-----YFFASSPGSCSSISTLSRPAPNPWNQACDHSLCRATLAAPWSAI 712
           M+  GRK  +       F+A+  G   +I+TL+  A      A   SL      APW+A 
Sbjct: 1   MQILGRKVLEVSRRLPLFYAAHSGRAHAIATLAGAAARWAPPATSGSLA----TAPWAAT 56

Query: 711 QRRGAKVMGSDVRFGNVIQRKGRIFQVLKAQHTQHGRGGATIQVELRDVDNGNKITERFR 532
           QRRGAK++GSDV+ GNVIQR+G I+QV+KAQH+  GRGGATIQVELRDVD GNKITERFR
Sbjct: 57  QRRGAKMLGSDVKLGNVIQRRGHIYQVIKAQHSHQGRGGATIQVELRDVDTGNKITERFR 116

Query: 531 TDESIERVFVEEKSFTFLYQEGDSVTLMEATTFEQIEVAKELFGKAAGYLKDDMKVTVQF 352
           TDE++ERVFVEEKSFT+LYQEGD+VTLME  TFEQ+EV+KELFGKAA YLKD+MKV +Q+
Sbjct: 117 TDEALERVFVEEKSFTYLYQEGDTVTLMEPETFEQLEVSKELFGKAAAYLKDEMKVNLQY 176

Query: 351 YDGKPMSASVPQRVTCTVVDAQPNTKGLTAAPQYKRVLLDNGLTVLAPPFIAAGDEIVVN 172
           +DG+PMS +VPQRVTCTVV+AQPNTKGLTA PQYKRVLLDNGLTVLAPPFI AG+ IV++
Sbjct: 177 FDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFIEAGENIVIS 236

Query: 171 TTDDTYMTRA 142
           T DD+YMTRA
Sbjct: 237 TADDSYMTRA 246


>ref|NP_001149082.1| elongation factor P [Zea mays] gi|195624552|gb|ACG34106.1|
           elongation factor P [Zea mays]
          Length = 246

 Score =  335 bits (858), Expect = 1e-89
 Identities = 170/250 (68%), Positives = 202/250 (80%), Gaps = 5/250 (2%)
 Frame = -1

Query: 876 MRRFGRKAAQY-----YFFASSPGSCSSISTLSRPAPNPWNQACDHSLCRATLAAPWSAI 712
           M+  GRK  +       F+A+  G   +I+TL+  A      A   SL      APW+A 
Sbjct: 1   MQILGRKVLEASRRLPLFYAAHSGRAHAIATLAGAAARWAPPATSGSLA----TAPWAAT 56

Query: 711 QRRGAKVMGSDVRFGNVIQRKGRIFQVLKAQHTQHGRGGATIQVELRDVDNGNKITERFR 532
           QRRGAK++GSDV+ GNVIQR+G I+QV+KAQH+  GRGGATIQVELRDVD GNKITERFR
Sbjct: 57  QRRGAKMLGSDVKLGNVIQRRGHIYQVIKAQHSHQGRGGATIQVELRDVDTGNKITERFR 116

Query: 531 TDESIERVFVEEKSFTFLYQEGDSVTLMEATTFEQIEVAKELFGKAAGYLKDDMKVTVQF 352
           TDE++ERVFVEEKSFT+LYQEGD+VTLME  TFEQ+EV+KELFGKAA YLKD+MKV +Q+
Sbjct: 117 TDEALERVFVEEKSFTYLYQEGDTVTLMEPETFEQLEVSKELFGKAAAYLKDEMKVNLQY 176

Query: 351 YDGKPMSASVPQRVTCTVVDAQPNTKGLTAAPQYKRVLLDNGLTVLAPPFIAAGDEIVVN 172
           +DG+PMS +VPQRVTCTVV+AQPNTKGLTA PQYKRVLLDNGLTVLAPPFI AG+ IV++
Sbjct: 177 FDGRPMSGTVPQRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFIEAGENIVIS 236

Query: 171 TTDDTYMTRA 142
           T DD+YMTRA
Sbjct: 237 TADDSYMTRA 246


>ref|XP_002463696.1| hypothetical protein SORBIDRAFT_01g004430 [Sorghum bicolor]
           gi|241917550|gb|EER90694.1| hypothetical protein
           SORBIDRAFT_01g004430 [Sorghum bicolor]
          Length = 246

 Score =  333 bits (855), Expect = 3e-89
 Identities = 163/233 (69%), Positives = 198/233 (84%)
 Frame = -1

Query: 840 FFASSPGSCSSISTLSRPAPNPWNQACDHSLCRATLAAPWSAIQRRGAKVMGSDVRFGNV 661
           F+A+  G   +++TL+  A      A   SL     AAPW+A QRRG K++GSDV+ GN+
Sbjct: 18  FYAAHSGRAHAVATLAGAAARWAPPATSGSLA----AAPWAATQRRGVKMLGSDVKLGNI 73

Query: 660 IQRKGRIFQVLKAQHTQHGRGGATIQVELRDVDNGNKITERFRTDESIERVFVEEKSFTF 481
           IQR+GRI+QV+KAQH+  GRGGATIQVELRDVD GNK+TERFRTDE++ERVFVEEKSFT+
Sbjct: 74  IQRRGRIYQVIKAQHSHQGRGGATIQVELRDVDTGNKLTERFRTDEALERVFVEEKSFTY 133

Query: 480 LYQEGDSVTLMEATTFEQIEVAKELFGKAAGYLKDDMKVTVQFYDGKPMSASVPQRVTCT 301
           LYQEGD+VTLME  TFEQ+EV+KELFGKAA YLKD+MKV +Q++DG+PMS +VPQRVTCT
Sbjct: 134 LYQEGDTVTLMEPETFEQLEVSKELFGKAAAYLKDEMKVNLQYFDGRPMSGTVPQRVTCT 193

Query: 300 VVDAQPNTKGLTAAPQYKRVLLDNGLTVLAPPFIAAGDEIVVNTTDDTYMTRA 142
           VV+AQPNTKGLTA PQYKRVLLDNGL+VLAPPFI AG++IV++T DD+YMTRA
Sbjct: 194 VVEAQPNTKGLTAQPQYKRVLLDNGLSVLAPPFIEAGEKIVISTADDSYMTRA 246


>gb|AAP21425.1| putative translation elongation factor P [Oryza sativa Japonica
           Group]
          Length = 247

 Score =  327 bits (839), Expect = 2e-87
 Identities = 155/197 (78%), Positives = 184/197 (93%)
 Frame = -1

Query: 732 AAPWSAIQRRGAKVMGSDVRFGNVIQRKGRIFQVLKAQHTQHGRGGATIQVELRDVDNGN 553
           AAPW+AIQRRGAK++GS+V+ GNVIQR+GRI+QV+KAQH+  GRGGATIQVELRDVD GN
Sbjct: 51  AAPWAAIQRRGAKMLGSEVKLGNVIQRRGRIYQVIKAQHSHQGRGGATIQVELRDVDTGN 110

Query: 552 KITERFRTDESIERVFVEEKSFTFLYQEGDSVTLMEATTFEQIEVAKELFGKAAGYLKDD 373
           KITERFRTDE++ERVFVEEKSFT+LYQEGD+VTLME  TFEQ+EV+KELFGK A YLKD+
Sbjct: 111 KITERFRTDEALERVFVEEKSFTYLYQEGDNVTLMEPETFEQLEVSKELFGKTAAYLKDE 170

Query: 372 MKVTVQFYDGKPMSASVPQRVTCTVVDAQPNTKGLTAAPQYKRVLLDNGLTVLAPPFIAA 193
           MKVT+Q++DG+PMSASVP RVTCTVV+AQP++KG+TA PQYKRVLLDNGLTVL PPF+ A
Sbjct: 171 MKVTLQYFDGRPMSASVPPRVTCTVVEAQPHSKGITAQPQYKRVLLDNGLTVLVPPFVEA 230

Query: 192 GDEIVVNTTDDTYMTRA 142
           G++IVV+T DD+YMTRA
Sbjct: 231 GEKIVVSTADDSYMTRA 247


>ref|XP_003559276.1| PREDICTED: elongation factor P-like [Brachypodium distachyon]
          Length = 248

 Score =  318 bits (816), Expect = 8e-85
 Identities = 152/196 (77%), Positives = 176/196 (89%)
 Frame = -1

Query: 732 AAPWSAIQRRGAKVMGSDVRFGNVIQRKGRIFQVLKAQHTQHGRGGATIQVELRDVDNGN 553
           A PW+A QRRGAK++GSDV+ GNVIQRKG I+QV+KAQH+  GRGGATIQVELRDVD GN
Sbjct: 53  ATPWAATQRRGAKMLGSDVKLGNVIQRKGHIYQVIKAQHSHQGRGGATIQVELRDVDTGN 112

Query: 552 KITERFRTDESIERVFVEEKSFTFLYQEGDSVTLMEATTFEQIEVAKELFGKAAGYLKDD 373
           KI ERFRTDE++ERVFVEEKSFT+LYQEGD+V LME  TFEQIEV+K+LFGKAA YLKD+
Sbjct: 113 KIVERFRTDEALERVFVEEKSFTYLYQEGDNVALMEPNTFEQIEVSKDLFGKAAAYLKDE 172

Query: 372 MKVTVQFYDGKPMSASVPQRVTCTVVDAQPNTKGLTAAPQYKRVLLDNGLTVLAPPFIAA 193
           M+VT+Q+YDG+ +S SVP RVTCTVV+AQPNTKGLTA PQYKRVLLDNGLTVLAPPFI A
Sbjct: 173 MRVTLQYYDGRAVSGSVPPRVTCTVVEAQPNTKGLTAQPQYKRVLLDNGLTVLAPPFIEA 232

Query: 192 GDEIVVNTTDDTYMTR 145
           G+ IV+ T DD+Y+TR
Sbjct: 233 GESIVITTVDDSYVTR 248


Top