BLASTX nr result

ID: Dioscorea21_contig00026817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026817
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinu...    69   4e-10
ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinu...    69   5e-10
gb|ABW81071.1| unknown [Cleome spinosa]                                65   4e-09
ref|XP_002863051.1| predicted protein [Arabidopsis lyrata subsp....    64   1e-08
emb|CAN80120.1| hypothetical protein VITISV_005872 [Vitis vinifera]    63   2e-08

>ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinus communis]
            gi|223545321|gb|EEF46826.1| glutamate receptor 2 plant,
            putative [Ricinus communis]
          Length = 961

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/76 (39%), Positives = 54/76 (71%)
 Frame = +3

Query: 3    NSANLTFQSFSGLFIITGAASTCALLIFLALFLSKNWQELKNLDSDKTAWQRLMSLWKYY 182
            +S +L+ +SF GLF+I+G AS  AL+I+ A+F  ++WQ ++  DS+   W +++ L + +
Sbjct: 823  SSNSLSLRSFWGLFLISGTASALALMIYGAMFTYEHWQIIRRSDSEARIWSKIVHLLRIF 882

Query: 183  NKKDLNSHTSRRNNVS 230
            ++KDL SHT R++ V+
Sbjct: 883  DEKDLKSHTFRKSEVN 898


>ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinus communis]
            gi|223545322|gb|EEF46827.1| glutamate receptor 2 plant,
            putative [Ricinus communis]
          Length = 931

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/93 (36%), Positives = 60/93 (64%)
 Frame = +3

Query: 3    NSANLTFQSFSGLFIITGAASTCALLIFLALFLSKNWQELKNLDSDKTAWQRLMSLWKYY 182
            +S +L+ +SF GLF+I G AS  AL+I+ A+F  ++WQ ++  DS+   W R++ L + +
Sbjct: 799  SSNSLSLRSFWGLFLIAGTASALALMIYGAMFTYEHWQIIRRSDSEARIWSRIVHLLRIF 858

Query: 183  NKKDLNSHTSRRNNVSNEKVSVNANDRNYDSCQ 281
            ++KDL SHT R++  +  ++S+ A   +  S Q
Sbjct: 859  DEKDLKSHTFRKSEAN--EISMGAPSPSIYSVQ 889


>gb|ABW81071.1| unknown [Cleome spinosa]
          Length = 986

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
 Frame = +3

Query: 3    NSANLTFQSFSGLFIITGAASTCALLIFLALFLSKNWQEL--KNLDSDKTAWQRLMSLWK 176
            +S +L+  SF GLF+I G AS  ALL+FLA+FL +    L   N + + + W++   L +
Sbjct: 822  SSNSLSLSSFWGLFLIVGVASVLALLVFLAMFLFEQRHTLIQSNDEPEHSMWRKWAVLVR 881

Query: 177  YYNKKDLNSHTSRRNNVSNEKVSVNANDRNYDSCQESQGVETQT 308
             +++KD+NSHT R+N+     +S+N +   +  C  S      T
Sbjct: 882  IFDQKDMNSHTFRKNDNVQNVISINGSPNTH--CPPSPSTSRNT 923


>ref|XP_002863051.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297308856|gb|EFH39310.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 753

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/77 (44%), Positives = 52/77 (67%)
 Frame = +3

Query: 3   NSANLTFQSFSGLFIITGAASTCALLIFLALFLSKNWQELKNLDSDKTAWQRLMSLWKYY 182
           +S  L+  SFSGLF+I G AS  A+LIF++LFL +N   L   DS+ + W +L SL++ +
Sbjct: 614 SSNRLSLSSFSGLFLIAGIASFLAVLIFVSLFLYENRHTLCE-DSEDSIWGKLTSLFRNF 672

Query: 183 NKKDLNSHTSRRNNVSN 233
           ++KD+ SHT + + V N
Sbjct: 673 DEKDIKSHTFKTSAVHN 689


>emb|CAN80120.1| hypothetical protein VITISV_005872 [Vitis vinifera]
          Length = 252

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
 Frame = +3

Query: 3   NSANLTFQSFSGLFIITGAASTCALLIFLALFLSKNWQELKNLDSDKTAWQRLMSLWKYY 182
           +S ++   SF GLF+I G AS+ AL+I +  FL +N   L  LD     W+++ +L   +
Sbjct: 112 SSESIGVDSFWGLFLIAGVASSAALIICMVTFLYENRDALVQLDPPTPVWRKIKALATRF 171

Query: 183 NKKDLNSHTSRRNNVSNEKVSVNAND-------RNYDSCQESQGVETQT 308
           + KDL+SHT R++ +  E+  +N  D        NY     S  V+TQ+
Sbjct: 172 DNKDLSSHTFRKSEM-GERNGINGMDAVTASPATNYPPSPSSLSVQTQS 219


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