BLASTX nr result

ID: Dioscorea21_contig00026664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026664
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA34093.1| phytochrome B, partial [Nicotiana tabacum]             163   1e-38
sp|P29130.2|PHYB_TOBAC RecName: Full=Phytochrome B gi|295346|gb|...   163   1e-38
emb|CAA74992.1| phytochrome B [Nicotiana plumbaginifolia]             160   1e-37
emb|CBI22877.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002278263.1| PREDICTED: phytochrome B-like [Vitis vinifera]    160   1e-37

>gb|AAA34093.1| phytochrome B, partial [Nicotiana tabacum]
          Length = 677

 Score =  163 bits (413), Expect = 1e-38
 Identities = 75/82 (91%), Positives = 78/82 (95%)
 Frame = -3

Query: 248 QQSKNAVFVIVNACSSKDYVNNIVGVCFIAQDVTGQKVVMDKFIHIQGDYKAIVHSPNPL 69
           +Q K AVFV+VNACSSKDY NNIVGVCF+ QDVTGQKVVMDKFIHIQGDYKAIVHSPNPL
Sbjct: 254 EQLKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPL 313

Query: 68  IPPIFASDENTCCSEWNTAMEK 3
           IPPIFASDENTCCSEWNTAMEK
Sbjct: 314 IPPIFASDENTCCSEWNTAMEK 335


>sp|P29130.2|PHYB_TOBAC RecName: Full=Phytochrome B gi|295346|gb|AAA34092.1| type II
           phytochrome [Nicotiana tabacum]
          Length = 1132

 Score =  163 bits (413), Expect = 1e-38
 Identities = 75/82 (91%), Positives = 78/82 (95%)
 Frame = -3

Query: 248 QQSKNAVFVIVNACSSKDYVNNIVGVCFIAQDVTGQKVVMDKFIHIQGDYKAIVHSPNPL 69
           +Q K AVFV+VNACSSKDY NNIVGVCF+ QDVTGQKVVMDKFIHIQGDYKAIVHSPNPL
Sbjct: 709 EQLKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPL 768

Query: 68  IPPIFASDENTCCSEWNTAMEK 3
           IPPIFASDENTCCSEWNTAMEK
Sbjct: 769 IPPIFASDENTCCSEWNTAMEK 790


>emb|CAA74992.1| phytochrome B [Nicotiana plumbaginifolia]
          Length = 1135

 Score =  160 bits (405), Expect = 1e-37
 Identities = 73/81 (90%), Positives = 76/81 (93%)
 Frame = -3

Query: 248 QQSKNAVFVIVNACSSKDYVNNIVGVCFIAQDVTGQKVVMDKFIHIQGDYKAIVHSPNPL 69
           +Q K AVFV+VNACSSKDY NNIVGVCF+ QDVTGQKVVMDKFIHIQGDYKAIVHSPNPL
Sbjct: 712 EQPKKAVFVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPL 771

Query: 68  IPPIFASDENTCCSEWNTAME 6
           IPPIF SDENTCCSEWNTAME
Sbjct: 772 IPPIFVSDENTCCSEWNTAME 792


>emb|CBI22877.3| unnamed protein product [Vitis vinifera]
          Length = 982

 Score =  160 bits (404), Expect = 1e-37
 Identities = 74/82 (90%), Positives = 77/82 (93%)
 Frame = -3

Query: 248 QQSKNAVFVIVNACSSKDYVNNIVGVCFIAQDVTGQKVVMDKFIHIQGDYKAIVHSPNPL 69
           QQ K AVFV+VNACSS+DY NNIVGVCF+ QDVTGQKVVMDKFIHIQGDYKAIVHSPNPL
Sbjct: 559 QQHKKAVFVVVNACSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPL 618

Query: 68  IPPIFASDENTCCSEWNTAMEK 3
           IPPIFASDENT CSEWNTAMEK
Sbjct: 619 IPPIFASDENTVCSEWNTAMEK 640


>ref|XP_002278263.1| PREDICTED: phytochrome B-like [Vitis vinifera]
          Length = 1129

 Score =  160 bits (404), Expect = 1e-37
 Identities = 74/82 (90%), Positives = 77/82 (93%)
 Frame = -3

Query: 248 QQSKNAVFVIVNACSSKDYVNNIVGVCFIAQDVTGQKVVMDKFIHIQGDYKAIVHSPNPL 69
           QQ K AVFV+VNACSS+DY NNIVGVCF+ QDVTGQKVVMDKFIHIQGDYKAIVHSPNPL
Sbjct: 706 QQHKKAVFVVVNACSSRDYTNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPL 765

Query: 68  IPPIFASDENTCCSEWNTAMEK 3
           IPPIFASDENT CSEWNTAMEK
Sbjct: 766 IPPIFASDENTVCSEWNTAMEK 787


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