BLASTX nr result

ID: Dioscorea21_contig00026371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026371
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593767.1| U-box domain-containing protein [Medicago tr...    59   4e-07
ref|XP_004170932.1| PREDICTED: U-box domain-containing protein 7...    57   1e-06
ref|XP_004134928.1| PREDICTED: U-box domain-containing protein 7...    57   1e-06
ref|XP_002266726.1| PREDICTED: U-box domain-containing protein 7...    57   2e-06
ref|XP_002522564.1| ubiquitin-protein ligase, putative [Ricinus ...    56   3e-06

>ref|XP_003593767.1| U-box domain-containing protein [Medicago truncatula]
           gi|355482815|gb|AES64018.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 440

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = +2

Query: 44  KLKCLATLYNLSTKLETLNLVSSSVPLVHALLTLSLHDQ-SELALAILANLVLSSRGKKA 220
           K  CL  LYNLST LE  + + S   LV  LL LSL  + SE ALA L NL+++  GKKA
Sbjct: 227 KRSCLGALYNLSTMLENASPLVS-YGLVPILLELSLVKEISEKALATLGNLLVTLMGKKA 285

Query: 221 IEDDPMVPQALIDII 265
           IE++ MVPQ  ++I+
Sbjct: 286 IENNSMVPQNFVEIL 300


>ref|XP_004170932.1| PREDICTED: U-box domain-containing protein 7-like, partial [Cucumis
           sativus]
          Length = 445

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
 Frame = +2

Query: 53  CLATLYNLSTKLETLN-LVSSSVPLVHALLTL-SLHDQSELALAILANLVLSSRGKKAIE 226
           CL TLYN+ST LE +  LVS+ V  VH LL + S    S+ ALA L NLV++S+GK+ +E
Sbjct: 236 CLETLYNISTVLENVGPLVSNGV--VHILLKMSSSKGLSDRALAALGNLVVTSQGKREME 293

Query: 227 DDPMVPQALIDII 265
              MVP +LI I+
Sbjct: 294 SSQMVPDSLIKIM 306


>ref|XP_004134928.1| PREDICTED: U-box domain-containing protein 7-like [Cucumis sativus]
          Length = 444

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
 Frame = +2

Query: 53  CLATLYNLSTKLETLN-LVSSSVPLVHALLTL-SLHDQSELALAILANLVLSSRGKKAIE 226
           CL TLYN+ST LE +  LVS+ V  VH LL + S    S+ ALA L NLV++S+GK+ +E
Sbjct: 235 CLETLYNISTVLENVGPLVSNGV--VHILLKMSSSKGLSDRALAALGNLVVTSQGKREME 292

Query: 227 DDPMVPQALIDII 265
              MVP +LI I+
Sbjct: 293 SSQMVPDSLIKIM 305


>ref|XP_002266726.1| PREDICTED: U-box domain-containing protein 7 [Vitis vinifera]
           gi|297740492|emb|CBI30674.3| unnamed protein product
           [Vitis vinifera]
          Length = 431

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
 Frame = +2

Query: 44  KLKCLATLYNLSTKLETLN-LVSSSVPLVHALLTL-SLHDQSELALAILANLVLSSRGKK 217
           K  C+ TLYNLS  L+    LV+  V  V +LL L S+ + SE ALA L NLV++  GKK
Sbjct: 218 KESCICTLYNLSAVLDNSGPLVNGGV--VQSLLRLVSVKEVSEKALATLGNLVVTMMGKK 275

Query: 218 AIEDDPMVPQALIDII 265
           A+E+  +VP++LI+I+
Sbjct: 276 AVENSTLVPESLIEIM 291


>ref|XP_002522564.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223538255|gb|EEF39864.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 439

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/81 (40%), Positives = 49/81 (60%)
 Frame = +2

Query: 23  TNLDPNLKLKCLATLYNLSTKLETLNLVSSSVPLVHALLTLSLHDQSELALAILANLVLS 202
           +N     K  CL TLYNLS  LE    + S+  +   L  +S+ + SE +LA L +LV+S
Sbjct: 214 SNSSVETKQSCLGTLYNLSAVLENAGPLLSNGVVQILLSLISVKELSEKSLATLGHLVVS 273

Query: 203 SRGKKAIEDDPMVPQALIDII 265
             GKKA+E+   VP++LI+I+
Sbjct: 274 LMGKKAMENHIKVPESLIEIL 294


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