BLASTX nr result

ID: Dioscorea21_contig00026059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026059
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA54203.1| TPA: histone mRNA exonuclease 1 [Zea mays]             79   7e-13
ref|XP_003542802.1| PREDICTED: uncharacterized protein LOC100811...    79   7e-13
gb|ACG36494.1| histone mRNA exonuclease 1 [Zea mays]                   79   7e-13
tpg|DAA54202.1| TPA: hypothetical protein ZEAMMB73_728544 [Zea m...    78   9e-13
ref|XP_003546701.1| PREDICTED: uncharacterized protein LOC100780...    77   1e-12

>tpg|DAA54203.1| TPA: histone mRNA exonuclease 1 [Zea mays]
          Length = 436

 Score = 78.6 bits (192), Expect = 7e-13
 Identities = 49/133 (36%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
 Frame = +1

Query: 175 DPDPEESMDKRNEASIRCLQFNSHHCGSEGSGIAIKQDHELKEEMNVYPSHMESNNSF-- 348
           D +  E M   NEA + CL+ N     S           E    +  +P + E  N    
Sbjct: 3   DRERAEEMQVNNEAPLGCLKPNISQYNSP----------EQIGGVEGFPENNEKRNDIVA 52

Query: 349 -HRISYTPLNHAYVRPCYHQEFWTMPNIYSDVHKVPQSQMGTFENNFYQMNRDYFFPVEN 525
             +I     N    RP Y QEF+  P IYSD   V Q     F+N FYQ+NRD+ FP+EN
Sbjct: 53  AEKIWEATPNQGLSRPIYRQEFYAWPYIYSDYQIVRQPLPYGFDNQFYQINRDHGFPIEN 112

Query: 526 RFQYVPLKMFTQG 564
           R QY+P KM  QG
Sbjct: 113 RVQYLPFKMLPQG 125


>ref|XP_003542802.1| PREDICTED: uncharacterized protein LOC100811151 [Glycine max]
          Length = 414

 Score = 78.6 bits (192), Expect = 7e-13
 Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
 Frame = +1

Query: 190 ESMDKRNEASIRCLQFNSHHCGSEGSGIAIKQDHELKEEMNVYPSHMESNNSFHRIS--Y 363
           E+M    EAS++CLQ     C  + +G +++   ELK E   +PS   +  + H  S   
Sbjct: 8   ENMQINCEASLKCLQGKGFPCNFQSNGSSMEGFTELKNEPGTHPSGDVAEPNCHLGSEFL 67

Query: 364 TPLNHAYVRPCYHQEFWTMPNIYSDVHKVPQSQMGTFENNFYQMNRDYFFPVENRFQYVP 543
            P N  + +P YHQ + T    + + HKV Q QM  FE+++Y       +PVEN  QYVP
Sbjct: 68  EPSNEFHTKPTYHQNYSTWTPCHFNSHKVQQCQMNAFESHYYP------YPVENPLQYVP 121

Query: 544 LKMFTQG 564
           + M  QG
Sbjct: 122 INMVAQG 128


>gb|ACG36494.1| histone mRNA exonuclease 1 [Zea mays]
          Length = 437

 Score = 78.6 bits (192), Expect = 7e-13
 Identities = 49/133 (36%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
 Frame = +1

Query: 175 DPDPEESMDKRNEASIRCLQFNSHHCGSEGSGIAIKQDHELKEEMNVYPSHMESNNSF-- 348
           D +  E M   NEA + CL+ N     S           E    +  +P + E  N    
Sbjct: 3   DRERAEEMQVNNEAPLGCLKPNISQYNSP----------EQIGGVEGFPENNEKRNDIVA 52

Query: 349 -HRISYTPLNHAYVRPCYHQEFWTMPNIYSDVHKVPQSQMGTFENNFYQMNRDYFFPVEN 525
             +I     N    RP Y QEF+  P IYSD   V Q     F+N FYQ+NRD+ FP+EN
Sbjct: 53  AEKIWEATPNQGLSRPIYRQEFYAWPYIYSDYQIVRQPLPYGFDNQFYQINRDHGFPIEN 112

Query: 526 RFQYVPLKMFTQG 564
           R QY+P KM  QG
Sbjct: 113 RVQYLPFKMLPQG 125


>tpg|DAA54202.1| TPA: hypothetical protein ZEAMMB73_728544 [Zea mays]
          Length = 433

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 48/129 (37%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
 Frame = +1

Query: 187 EESMDKRNEASIRCLQFNSHHCGSEGSGIAIKQDHELKEEMNVYPSHMESNNSF---HRI 357
           +E M   NEA + CL+ N     S           E    +  +P + E  N      +I
Sbjct: 4   DEEMQVNNEAPLGCLKPNISQYNSP----------EQIGGVEGFPENNEKRNDIVAAEKI 53

Query: 358 SYTPLNHAYVRPCYHQEFWTMPNIYSDVHKVPQSQMGTFENNFYQMNRDYFFPVENRFQY 537
                N    RP Y QEF+  P IYSD   V Q     F+N FYQ+NRD+ FP+ENR QY
Sbjct: 54  WEATPNQGLSRPIYRQEFYAWPYIYSDYQIVRQPLPYGFDNQFYQINRDHGFPIENRVQY 113

Query: 538 VPLKMFTQG 564
           +P KM  QG
Sbjct: 114 LPFKMLPQG 122


>ref|XP_003546701.1| PREDICTED: uncharacterized protein LOC100780340 [Glycine max]
          Length = 414

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
 Frame = +1

Query: 190 ESMDKRNEASIRCLQFNSHHCGSEGSGIAIKQDHELKEEMNVYPSHMESNNSFHRIS--Y 363
           E+M    EAS++CLQ     C  + +G +++   ELK E   +P+   +  + H  S   
Sbjct: 8   ENMQINCEASLKCLQSKGFPCNFQSNGNSMEGYTELKNEPGTHPAGDVAEPNCHLGSEFL 67

Query: 364 TPLNHAYVRPCYHQEFWTMPNIYSDVHKVPQSQMGTFENNFYQMNRDYFFPVENRFQYVP 543
            P N  + +P YHQ + T    + + HKV Q QM  FE+++Y       +PVEN  QYVP
Sbjct: 68  EPSNEFHTKPTYHQNYSTWTPCHFNSHKVQQCQMNAFESHYYP------YPVENPLQYVP 121

Query: 544 LKMFTQG 564
           + M  QG
Sbjct: 122 INMVAQG 128


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