BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025969
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK05382.1| predicted protein [Hordeum vulgare subsp. vulgare]    117   7e-25
ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...   115   5e-24
ref|XP_002436683.1| hypothetical protein SORBIDRAFT_10g006995 [S...   112   2e-23
gb|ABF96484.1| DNA-directed RNA polymerase III 130 kDa polypepti...   112   4e-23

>dbj|BAK05382.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/93 (63%), Positives = 68/93 (73%)
 Frame = +2

Query: 32  ADPNVDLSSLAAPVSSPVDKFPLLPAFLKVRGLVKQHIDSFDYFINHGIKKIMKANDRIV 211
           A P     SLAAPVS+PVDKF LLPAFLKVRGLVK+HIDSF+YFI  GIK I++AN+RI 
Sbjct: 19  APPVPTYRSLAAPVSNPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIKNIVRANNRIE 78

Query: 212 CRHDPAMYLRYTNIYVARPSRITDTINEPLTPH 310
            R DP +YL Y NIY+  PS   D   E +TPH
Sbjct: 79  ARSDPGIYLEYKNIYIGEPSVQVDFRVETITPH 111


>ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|222868352|gb|EEF05483.1|
           predicted protein [Populus trichocarpa]
          Length = 1141

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/83 (65%), Positives = 68/83 (81%)
 Frame = +2

Query: 62  AAPVSSPVDKFPLLPAFLKVRGLVKQHIDSFDYFINHGIKKIMKANDRIVCRHDPAMYLR 241
           AAPV S VDKF LLP FLK RGLVKQH+DSF+YFIN GIKKI++ANDRIV   DP++YLR
Sbjct: 11  AAPVKSAVDKFQLLPEFLKGRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTVDPSLYLR 70

Query: 242 YTNIYVARPSRITDTINEPLTPH 310
           +T++ + +PS + D I+E +TPH
Sbjct: 71  FTDVKIGKPSMVVDAISEQITPH 93


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus
           communis] gi|223535120|gb|EEF36800.1| DNA-directed RNA
           polymerase III subunit, putative [Ricinus communis]
          Length = 1139

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/89 (59%), Positives = 68/89 (76%)
 Frame = +2

Query: 44  VDLSSLAAPVSSPVDKFPLLPAFLKVRGLVKQHIDSFDYFINHGIKKIMKANDRIVCRHD 223
           +D   L AP+ S VDKF LLP FLKVRGLVKQH+DSF+YF+N GIKKI++ANDRIV   D
Sbjct: 22  IDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRIVSTVD 81

Query: 224 PAMYLRYTNIYVARPSRITDTINEPLTPH 310
           P +YLR+ ++ +  PS I D ++E L+PH
Sbjct: 82  PGIYLRFKDVRIGTPSDIMDGVSEQLSPH 110


>ref|XP_002436683.1| hypothetical protein SORBIDRAFT_10g006995 [Sorghum bicolor]
           gi|241914906|gb|EER88050.1| hypothetical protein
           SORBIDRAFT_10g006995 [Sorghum bicolor]
          Length = 1137

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/85 (64%), Positives = 68/85 (80%)
 Frame = +2

Query: 56  SLAAPVSSPVDKFPLLPAFLKVRGLVKQHIDSFDYFINHGIKKIMKANDRIVCRHDPAMY 235
           SLAAPV  PVDKF LLPAFLKVRGLVK+HIDSF+YFI+ GIKKI++AN+RI  R+DP++Y
Sbjct: 8   SLAAPVRKPVDKFALLPAFLKVRGLVKEHIDSFNYFIDKGIKKIVEANNRIEARNDPSIY 67

Query: 236 LRYTNIYVARPSRITDTINEPLTPH 310
           LRY ++ V  PS   +   E +TPH
Sbjct: 68  LRYLDVRVGMPSIYENCNVESITPH 92


>gb|ABF96484.1| DNA-directed RNA polymerase III 130 kDa polypeptide, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 1039

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 5/97 (5%)
 Frame = +2

Query: 35  DPNVDLSS-----LAAPVSSPVDKFPLLPAFLKVRGLVKQHIDSFDYFINHGIKKIMKAN 199
           DPN  L S     LAAPV+ PVDKF LLPAFLKVRGLVK+HIDSF+YFI  GI+ I+KAN
Sbjct: 14  DPNASLPSPTYRSLAAPVTKPVDKFALLPAFLKVRGLVKEHIDSFNYFITKGIRNIVKAN 73

Query: 200 DRIVCRHDPAMYLRYTNIYVARPSRITDTINEPLTPH 310
           +RI  R++P+++LRY ++ V  PS     I E +TPH
Sbjct: 74  NRIEARNNPSIFLRYNSVRVGVPSVQVQYIAEKITPH 110