BLASTX nr result
ID: Dioscorea21_contig00025961
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00025961
(1345 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16200.3| unnamed protein product [Vitis vinifera] 364 3e-98
ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containi... 364 3e-98
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera] 360 4e-97
ref|NP_172253.1| pentatricopeptide repeat-containing protein [Ar... 350 4e-94
ref|XP_002892416.1| pentatricopeptide repeat-containing protein ... 347 5e-93
>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 364 bits (934), Expect = 3e-98
Identities = 199/400 (49%), Positives = 253/400 (63%), Gaps = 2/400 (0%)
Frame = -3
Query: 1283 FLADLKSTEDPADALRLL--LHSPPHFHDYPACXXXXXXXXXXXLFPLVDSLLLFIRSNR 1110
FLADLKS +DP DAL L HDYP+ F V++LL ++++
Sbjct: 455 FLADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNIN 514
Query: 1109 IPCKESXXXXXXXXXXXXXXXXXXXXXXXALNLFLSIPSFNCSPSSPSRQTLNFLLNALV 930
I C+E+ A+ LF +PSFNC + S N LLN LV
Sbjct: 515 IRCRETLFIALIQHYGKSQMPEK------AVELFQRMPSFNCHRTLVS---FNTLLNVLV 565
Query: 929 DNDALHEAESYLARCKEWNLRPNVISYNIVLKGRCTKYGFENARHLLDEMRKRRVRPSVV 750
+ND +A R + R N IS+NI++KG K ++ A + +EM + V+P+VV
Sbjct: 566 ENDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVV 625
Query: 749 SYNILIGFMSRNGCLDGAMRLKEEMVSKGTHPNAVTFALLMEGLCREGKFDEAKKMMFDM 570
++N LIGF+ G LDGAM L E+M+ K PNAVT+ALLMEGLC GK+ EAKKMMFDM
Sbjct: 626 TFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDM 685
Query: 569 EYQGCKTRLVNYGVLMSDCGRRGDLDGMNKVFVEMSRRRLRPDVVTYNILINYLCAHGRV 390
+YQGCK RL+N+GVLMSD GRRG +D + +EM RRR +PDVVTYNILIN+LC GR
Sbjct: 686 DYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRA 745
Query: 389 DDAYKVFVEMQLKGCEPSAATYRMMVDGFCRVREFDKGLRVLSTMLCGKHCVKEESFEAL 210
+AYKV VEMQ+ GCEP+AATYRMMVDGFC+V +F+ GL+VLS ML HC + ESF L
Sbjct: 746 LEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDL 805
Query: 209 VVGLCEGGKVDDACFVLEAMEKRRMVLGFQGWSALVVGSC 90
VVGL + GK+D ACFVLE MEKR+M + W ALV +C
Sbjct: 806 VVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDAC 845
Score = 82.8 bits (203), Expect = 2e-13
Identities = 50/193 (25%), Positives = 95/193 (49%)
Frame = -3
Query: 971 PSRQTLNFLLNALVDNDALHEAESYLARCKEWNLRPNVISYNIVLKGRCTKYGFENARHL 792
P+ T L+ L EA+ + +P ++++ +++ + ++++ L
Sbjct: 657 PNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTL 716
Query: 791 LDEMRKRRVRPSVVSYNILIGFMSRNGCLDGAMRLKEEMVSKGTHPNAVTFALLMEGLCR 612
L EM++RR +P VV+YNILI + + G A ++ EM G PNA T+ ++++G C+
Sbjct: 717 LLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFCQ 776
Query: 611 EGKFDEAKKMMFDMEYQGCKTRLVNYGVLMSDCGRRGDLDGMNKVFVEMSRRRLRPDVVT 432
F+ K++ M G RL ++ L+ + G +DG V EM +R++R +
Sbjct: 777 VEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEA 836
Query: 431 YNILINYLCAHGR 393
+ L+ C R
Sbjct: 837 WEALVKDACPGDR 849
>ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Vitis vinifera]
Length = 501
Score = 364 bits (934), Expect = 3e-98
Identities = 199/400 (49%), Positives = 253/400 (63%), Gaps = 2/400 (0%)
Frame = -3
Query: 1283 FLADLKSTEDPADALRLL--LHSPPHFHDYPACXXXXXXXXXXXLFPLVDSLLLFIRSNR 1110
FLADLKS +DP DAL L HDYP+ F V++LL ++++
Sbjct: 93 FLADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNIN 152
Query: 1109 IPCKESXXXXXXXXXXXXXXXXXXXXXXXALNLFLSIPSFNCSPSSPSRQTLNFLLNALV 930
I C+E+ A+ LF +PSFNC + S N LLN LV
Sbjct: 153 IRCRETLFIALIQHYGKSQMPEK------AVELFQRMPSFNCHRTLVS---FNTLLNVLV 203
Query: 929 DNDALHEAESYLARCKEWNLRPNVISYNIVLKGRCTKYGFENARHLLDEMRKRRVRPSVV 750
+ND +A R + R N IS+NI++KG K ++ A + +EM + V+P+VV
Sbjct: 204 ENDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVV 263
Query: 749 SYNILIGFMSRNGCLDGAMRLKEEMVSKGTHPNAVTFALLMEGLCREGKFDEAKKMMFDM 570
++N LIGF+ G LDGAM L E+M+ K PNAVT+ALLMEGLC GK+ EAKKMMFDM
Sbjct: 264 TFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDM 323
Query: 569 EYQGCKTRLVNYGVLMSDCGRRGDLDGMNKVFVEMSRRRLRPDVVTYNILINYLCAHGRV 390
+YQGCK RL+N+GVLMSD GRRG +D + +EM RRR +PDVVTYNILIN+LC GR
Sbjct: 324 DYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRA 383
Query: 389 DDAYKVFVEMQLKGCEPSAATYRMMVDGFCRVREFDKGLRVLSTMLCGKHCVKEESFEAL 210
+AYKV VEMQ+ GCEP+AATYRMMVDGFC+V +F+ GL+VLS ML HC + ESF L
Sbjct: 384 LEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDL 443
Query: 209 VVGLCEGGKVDDACFVLEAMEKRRMVLGFQGWSALVVGSC 90
VVGL + GK+D ACFVLE MEKR+M + W ALV +C
Sbjct: 444 VVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDAC 483
Score = 82.8 bits (203), Expect = 2e-13
Identities = 50/193 (25%), Positives = 95/193 (49%)
Frame = -3
Query: 971 PSRQTLNFLLNALVDNDALHEAESYLARCKEWNLRPNVISYNIVLKGRCTKYGFENARHL 792
P+ T L+ L EA+ + +P ++++ +++ + ++++ L
Sbjct: 295 PNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTL 354
Query: 791 LDEMRKRRVRPSVVSYNILIGFMSRNGCLDGAMRLKEEMVSKGTHPNAVTFALLMEGLCR 612
L EM++RR +P VV+YNILI + + G A ++ EM G PNA T+ ++++G C+
Sbjct: 355 LLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFCQ 414
Query: 611 EGKFDEAKKMMFDMEYQGCKTRLVNYGVLMSDCGRRGDLDGMNKVFVEMSRRRLRPDVVT 432
F+ K++ M G RL ++ L+ + G +DG V EM +R++R +
Sbjct: 415 VEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEA 474
Query: 431 YNILINYLCAHGR 393
+ L+ C R
Sbjct: 475 WEALVKDACPGDR 487
>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
Length = 1051
Score = 360 bits (925), Expect = 4e-97
Identities = 197/400 (49%), Positives = 251/400 (62%), Gaps = 2/400 (0%)
Frame = -3
Query: 1283 FLADLKSTEDPADALRLL--LHSPPHFHDYPACXXXXXXXXXXXLFPLVDSLLLFIRSNR 1110
FLADLKS +DP DAL L HDYP+ F V++LL ++++
Sbjct: 384 FLADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNIN 443
Query: 1109 IPCKESXXXXXXXXXXXXXXXXXXXXXXXALNLFLSIPSFNCSPSSPSRQTLNFLLNALV 930
I C+E+ A+ LF +PSFNC + S N LLN LV
Sbjct: 444 IRCRETLFIALIQHYGKSQMPEK------AIELFQRMPSFNCHRTIVS---FNTLLNVLV 494
Query: 929 DNDALHEAESYLARCKEWNLRPNVISYNIVLKGRCTKYGFENARHLLDEMRKRRVRPSVV 750
+ D +A R + R N IS+NI++KG K ++ A + +EM + V+P+VV
Sbjct: 495 EIDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVV 554
Query: 749 SYNILIGFMSRNGCLDGAMRLKEEMVSKGTHPNAVTFALLMEGLCREGKFDEAKKMMFDM 570
++N LIGF+ G LDGAM L ++M+ K PNAVT+ALLMEGLC GK+ EAKKMMFDM
Sbjct: 555 TFNSLIGFLCGKGDLDGAMGLLZDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDM 614
Query: 569 EYQGCKTRLVNYGVLMSDCGRRGDLDGMNKVFVEMSRRRLRPDVVTYNILINYLCAHGRV 390
+YQGCK RL+N+GVLMSD GRRG +D + +EM RRR +PDVVTYNILIN LC GR
Sbjct: 615 DYQGCKPRLLNFGVLMSDLGRRGRIDDXKTLLLEMKRRRFKPDVVTYNILINXLCKEGRA 674
Query: 389 DDAYKVFVEMQLKGCEPSAATYRMMVDGFCRVREFDKGLRVLSTMLCGKHCVKEESFEAL 210
+AYKV VEMQ+ GCEP+AATYRMMVDGFC+V +F+ GL+VLS ML HC + ESF L
Sbjct: 675 XEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDL 734
Query: 209 VVGLCEGGKVDDACFVLEAMEKRRMVLGFQGWSALVVGSC 90
VVGL + GK+D ACFVLE MEKR+M + W ALV +C
Sbjct: 735 VVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALVKDAC 774
Score = 83.2 bits (204), Expect = 1e-13
Identities = 50/193 (25%), Positives = 94/193 (48%)
Frame = -3
Query: 971 PSRQTLNFLLNALVDNDALHEAESYLARCKEWNLRPNVISYNIVLKGRCTKYGFENARHL 792
P+ T L+ L EA+ + +P ++++ +++ + ++ + L
Sbjct: 586 PNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDXKTL 645
Query: 791 LDEMRKRRVRPSVVSYNILIGFMSRNGCLDGAMRLKEEMVSKGTHPNAVTFALLMEGLCR 612
L EM++RR +P VV+YNILI + + G A ++ EM G PNA T+ ++++G C+
Sbjct: 646 LLEMKRRRFKPDVVTYNILINXLCKEGRAXEAYKVLVEMQVGGCEPNAATYRMMVDGFCQ 705
Query: 611 EGKFDEAKKMMFDMEYQGCKTRLVNYGVLMSDCGRRGDLDGMNKVFVEMSRRRLRPDVVT 432
F+ K++ M G RL ++ L+ + G +DG V EM +R++R +
Sbjct: 706 VEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEA 765
Query: 431 YNILINYLCAHGR 393
+ L+ C R
Sbjct: 766 WEALVKDACPGDR 778
>ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR
repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis
thaliana] gi|31376389|gb|AAP49521.1| At1g07730
[Arabidopsis thaliana] gi|51970836|dbj|BAD44110.1|
hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 350 bits (899), Expect = 4e-94
Identities = 184/405 (45%), Positives = 248/405 (61%), Gaps = 3/405 (0%)
Frame = -3
Query: 1283 FLADLKSTEDPADALRLLLHSPPHF---HDYPACXXXXXXXXXXXLFPLVDSLLLFIRSN 1113
FL DLK EDP +AL L H HDYP+ F VD +L +R
Sbjct: 52 FLTDLKEIEDPEEALSLF-HQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYR 110
Query: 1112 RIPCKESXXXXXXXXXXXXXXXXXXXXXXXALNLFLSIPSFNCSPSSPSRQTLNFLLNAL 933
+ C+ES A+++F I SF+C + Q+LN L+N L
Sbjct: 111 NVRCRESLFMGLIQHYGKAGSVDK------AIDVFHKITSFDCVRTI---QSLNTLINVL 161
Query: 932 VDNDALHEAESYLARCKEWNLRPNVISYNIVLKGRCTKYGFENARHLLDEMRKRRVRPSV 753
VDN L +A+S+ K+ LRPN +S+NI++KG K +E A + DEM + V+PSV
Sbjct: 162 VDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSV 221
Query: 752 VSYNILIGFMSRNGCLDGAMRLKEEMVSKGTHPNAVTFALLMEGLCREGKFDEAKKMMFD 573
V+YN LIGF+ RN + A L E+M+ K PNAVTF LLM+GLC +G+++EAKK+MFD
Sbjct: 222 VTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFD 281
Query: 572 MEYQGCKTRLVNYGVLMSDCGRRGDLDGMNKVFVEMSRRRLRPDVVTYNILINYLCAHGR 393
MEY+GCK LVNYG+LMSD G+RG +D + EM +RR++PDVV YNIL+N+LC R
Sbjct: 282 MEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 392 VDDAYKVFVEMQLKGCEPSAATYRMMVDGFCRVREFDKGLRVLSTMLCGKHCVKEESFEA 213
V +AY+V EMQ+KGC+P+AATYRMM+DGFCR+ +FD GL VL+ ML +HC +F
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVC 401
Query: 212 LVVGLCEGGKVDDACFVLEAMEKRRMVLGFQGWSALVVGSCLHAG 78
+V GL +GG +D ACFVLE M K+ + G W L+ C+ G
Sbjct: 402 MVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDG 446
>ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338258|gb|EFH68675.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 459
Score = 347 bits (889), Expect = 5e-93
Identities = 182/405 (44%), Positives = 247/405 (60%), Gaps = 3/405 (0%)
Frame = -3
Query: 1283 FLADLKSTEDPADALRLLLHSPPHF---HDYPACXXXXXXXXXXXLFPLVDSLLLFIRSN 1113
FL DLK EDP +AL L H HDYP+ F VD +L +R
Sbjct: 52 FLTDLKEIEDPEEALSLF-HQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYR 110
Query: 1112 RIPCKESXXXXXXXXXXXXXXXXXXXXXXXALNLFLSIPSFNCSPSSPSRQTLNFLLNAL 933
+ C+ES A+++F + SF+C + Q+LN L+N L
Sbjct: 111 NVRCRESLFMALIQHYGKAGWVDK------AVDVFHKLTSFDCVRTI---QSLNTLINVL 161
Query: 932 VDNDALHEAESYLARCKEWNLRPNVISYNIVLKGRCTKYGFENARHLLDEMRKRRVRPSV 753
VDN L +A+S+ K+ LRPN +S+NI++KG K +E A + DEM + V+PSV
Sbjct: 162 VDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSV 221
Query: 752 VSYNILIGFMSRNGCLDGAMRLKEEMVSKGTHPNAVTFALLMEGLCREGKFDEAKKMMFD 573
V+YN LIGF+ RN + A L E+M+ K PNAVTF LLM+GLC G+++EAKK+MFD
Sbjct: 222 VTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFD 281
Query: 572 MEYQGCKTRLVNYGVLMSDCGRRGDLDGMNKVFVEMSRRRLRPDVVTYNILINYLCAHGR 393
MEY+GCK LVNYGVLMSD G+RG +D + EM +RR++PD V YNIL+N+LC GR
Sbjct: 282 MEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGR 341
Query: 392 VDDAYKVFVEMQLKGCEPSAATYRMMVDGFCRVREFDKGLRVLSTMLCGKHCVKEESFEA 213
V +AY+ EMQ+KGC+P+AATYRM+VDGFCR+ +FD GL VL+ ML +H +F
Sbjct: 342 VPEAYRTLTEMQMKGCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPATFVR 401
Query: 212 LVVGLCEGGKVDDACFVLEAMEKRRMVLGFQGWSALVVGSCLHAG 78
+V GL +GG +D ACFVLE M K+++ G+ W L+ C+ G
Sbjct: 402 MVSGLIKGGNLDHACFVLEVMGKKKLSFGYSAWQNLLCDLCIKDG 446