BLASTX nr result

ID: Dioscorea21_contig00025951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025951
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW76829.1| ROS1 protein [Zea mays]                                216   1e-53
gb|ACG42155.1| ROS1 protein [Zea mays] gi|219887377|gb|ACL54063....   216   1e-53
ref|XP_002438135.1| hypothetical protein SORBIDRAFT_10g008590 [S...   213   8e-53
dbj|BAD37860.1| HhH-GPD base excision DNA repair protein-related...   211   5e-52
gb|EAZ36418.1| hypothetical protein OsJ_20749 [Oryza sativa Japo...   211   5e-52

>gb|AFW76829.1| ROS1 protein [Zea mays]
          Length = 340

 Score =  216 bits (551), Expect = 1e-53
 Identities = 103/139 (74%), Positives = 119/139 (85%), Gaps = 2/139 (1%)
 Frame = -2

Query: 1537 GGLAVTKAVRIRSILKDVMERRGEICLEYLRALSVGEVKAELSRFKGIGPKTVACVLMFH 1358
            GGLA TKA RIRS+L+DV ERRG+ICLEYLR LSV EVK ELSRFKGIGPKTVACVLMF+
Sbjct: 189  GGLAATKAARIRSMLRDVRERRGKICLEYLRELSVDEVKKELSRFKGIGPKTVACVLMFY 248

Query: 1357 LQQDDFPVDTHVFRIAKAIGWVPMKADREKAYLHLNNRIPNDLKFDLNCLLITHGKLCPR 1178
            LQ+DDFPVDTHV RI KA+GWVP  A REKAY+HLNN+IP+DLKFDLNCL +THGKLC  
Sbjct: 249  LQKDDFPVDTHVLRITKAMGWVPATASREKAYIHLNNKIPDDLKFDLNCLFVTHGKLCQS 308

Query: 1177 CAKR--ASNQQSTDSPCPL 1127
            C K+  +  ++S++S CPL
Sbjct: 309  CTKKVGSDKRKSSNSACPL 327


>gb|ACG42155.1| ROS1 protein [Zea mays] gi|219887377|gb|ACL54063.1| unknown [Zea
            mays]
          Length = 276

 Score =  216 bits (551), Expect = 1e-53
 Identities = 103/139 (74%), Positives = 119/139 (85%), Gaps = 2/139 (1%)
 Frame = -2

Query: 1537 GGLAVTKAVRIRSILKDVMERRGEICLEYLRALSVGEVKAELSRFKGIGPKTVACVLMFH 1358
            GGLA TKA RIRS+L+DV ERRG+ICLEYLR LSV EVK ELSRFKGIGPKTVACVLMF+
Sbjct: 125  GGLAATKAARIRSMLRDVRERRGKICLEYLRELSVDEVKKELSRFKGIGPKTVACVLMFY 184

Query: 1357 LQQDDFPVDTHVFRIAKAIGWVPMKADREKAYLHLNNRIPNDLKFDLNCLLITHGKLCPR 1178
            LQ+DDFPVDTHV RI KA+GWVP  A REKAY+HLNN+IP+DLKFDLNCL +THGKLC  
Sbjct: 185  LQKDDFPVDTHVLRITKAMGWVPATASREKAYIHLNNKIPDDLKFDLNCLFVTHGKLCQS 244

Query: 1177 CAKR--ASNQQSTDSPCPL 1127
            C K+  +  ++S++S CPL
Sbjct: 245  CTKKVGSDKRKSSNSACPL 263


>ref|XP_002438135.1| hypothetical protein SORBIDRAFT_10g008590 [Sorghum bicolor]
            gi|241916358|gb|EER89502.1| hypothetical protein
            SORBIDRAFT_10g008590 [Sorghum bicolor]
          Length = 279

 Score =  213 bits (543), Expect = 8e-53
 Identities = 102/139 (73%), Positives = 117/139 (84%), Gaps = 2/139 (1%)
 Frame = -2

Query: 1537 GGLAVTKAVRIRSILKDVMERRGEICLEYLRALSVGEVKAELSRFKGIGPKTVACVLMFH 1358
            GGLA TKA RIR++L+DV ERRG+ICLEYLR LSV EVK ELSRFKGIGPKTVACVLMF+
Sbjct: 127  GGLATTKAARIRAMLRDVRERRGKICLEYLRELSVDEVKKELSRFKGIGPKTVACVLMFY 186

Query: 1357 LQQDDFPVDTHVFRIAKAIGWVPMKADREKAYLHLNNRIPNDLKFDLNCLLITHGKLCPR 1178
            LQ+DDFPVDTHV RI KA+GWVP  A REKAY+HLNN+IP+DLKFDLNCL +THGKLC  
Sbjct: 187  LQKDDFPVDTHVLRITKAMGWVPATASREKAYIHLNNKIPDDLKFDLNCLFVTHGKLCQS 246

Query: 1177 CAKRASNQQSTDS--PCPL 1127
            C K+  + +S +S   CPL
Sbjct: 247  CTKKVVSDKSKNSNAACPL 265


>dbj|BAD37860.1| HhH-GPD base excision DNA repair protein-related-like [Oryza sativa
            Japonica Group] gi|51535812|dbj|BAD37897.1| HhH-GPD base
            excision DNA repair protein-related-like [Oryza sativa
            Japonica Group] gi|218197872|gb|EEC80299.1| hypothetical
            protein OsI_22321 [Oryza sativa Indica Group]
          Length = 277

 Score =  211 bits (536), Expect = 5e-52
 Identities = 101/139 (72%), Positives = 117/139 (84%), Gaps = 2/139 (1%)
 Frame = -2

Query: 1537 GGLAVTKAVRIRSILKDVMERRGEICLEYLRALSVGEVKAELSRFKGIGPKTVACVLMFH 1358
            GGLA TKA RIR++L+ V ERRG+ICLEYLR LSV EVK ELSRFKGIGPKTVACVLMF+
Sbjct: 127  GGLAATKAARIRAMLRGVRERRGKICLEYLRDLSVDEVKTELSRFKGIGPKTVACVLMFY 186

Query: 1357 LQQDDFPVDTHVFRIAKAIGWVPMKADREKAYLHLNNRIPNDLKFDLNCLLITHGKLCPR 1178
            LQ+DDFPVDTHV RI  AIGWVP  A RE+AYLHLN++IP+DLKFDLNCL +THGKLC  
Sbjct: 187  LQKDDFPVDTHVLRITNAIGWVPATASRERAYLHLNSKIPDDLKFDLNCLFVTHGKLCQS 246

Query: 1177 CAKRASNQQST--DSPCPL 1127
            C+K+   Q++T  +S CPL
Sbjct: 247  CSKKLGGQKTTGSNSMCPL 265


>gb|EAZ36418.1| hypothetical protein OsJ_20749 [Oryza sativa Japonica Group]
          Length = 277

 Score =  211 bits (536), Expect = 5e-52
 Identities = 101/139 (72%), Positives = 117/139 (84%), Gaps = 2/139 (1%)
 Frame = -2

Query: 1537 GGLAVTKAVRIRSILKDVMERRGEICLEYLRALSVGEVKAELSRFKGIGPKTVACVLMFH 1358
            GGLA TKA RIR++L+ V ERRG+ICLEYLR LSV EVK ELSRFKGIGPKTVACVLMF+
Sbjct: 127  GGLAATKAARIRAMLRGVRERRGKICLEYLRDLSVDEVKTELSRFKGIGPKTVACVLMFY 186

Query: 1357 LQQDDFPVDTHVFRIAKAIGWVPMKADREKAYLHLNNRIPNDLKFDLNCLLITHGKLCPR 1178
            LQ+DDFPVDTHV RI  AIGWVP  A RE+AYLHLN++IP+DLKFDLNCL +THGKLC  
Sbjct: 187  LQKDDFPVDTHVLRITNAIGWVPATASRERAYLHLNSKIPDDLKFDLNCLFVTHGKLCQS 246

Query: 1177 CAKRASNQQST--DSPCPL 1127
            C+K+   Q++T  +S CPL
Sbjct: 247  CSKKLGGQKTTGSNSMCPL 265


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