BLASTX nr result

ID: Dioscorea21_contig00025902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025902
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511341.1| Protein LATERAL ORGAN BOUNDARIES, putative [...   148   8e-50
gb|AFJ42327.1| Ramosa2, partial [Chrysopogon gryllus]                 146   1e-49
gb|AFJ42328.1| Ramosa2, partial [Cymbopogon flexuosus]                146   2e-49
gb|ACG41691.1| ramosa 2 [Zea mays]                                    146   5e-49
ref|NP_001131918.1| ramosa2 [Zea mays] gi|84104903|gb|ABC54560.1...   146   5e-49

>ref|XP_002511341.1| Protein LATERAL ORGAN BOUNDARIES, putative [Ricinus communis]
           gi|223550456|gb|EEF51943.1| Protein LATERAL ORGAN
           BOUNDARIES, putative [Ricinus communis]
          Length = 188

 Score =  148 bits (373), Expect(2) = 8e-50
 Identities = 69/84 (82%), Positives = 73/84 (86%)
 Frame = +3

Query: 18  MAXXXXXXXPCAACKFLRRKCIPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNEVLP 197
           MA       PCAACKFLRRKC+PGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNE+LP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 198 H*REDAVNSLVYEVEARMKDPVMG 269
           H REDAVNSL YE EAR++DPV G
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYG 84



 Score = 75.9 bits (185), Expect(2) = 8e-50
 Identities = 36/41 (87%), Positives = 38/41 (92%)
 Frame = +2

Query: 263 YGCVGAISVLQRQV*RLQKELDAANADLLRYACGEIPTAMP 385
           YGCVGAIS LQRQV RLQKELDAANADL+RYAC EIPTA+P
Sbjct: 83  YGCVGAISFLQRQVLRLQKELDAANADLIRYACNEIPTALP 123


>gb|AFJ42327.1| Ramosa2, partial [Chrysopogon gryllus]
          Length = 263

 Score =  146 bits (368), Expect(2) = 1e-49
 Identities = 65/75 (86%), Positives = 71/75 (94%)
 Frame = +3

Query: 45  PCAACKFLRRKCIPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNEVLPH*REDAVNS 224
           PCAACKFLRRKC+PGC+FAPYFPPEEPQKFANVHK+FGASNVTKLLNE+LPH REDAV+S
Sbjct: 26  PCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKVFGASNVTKLLNELLPHQREDAVSS 85

Query: 225 LVYEVEARMKDPVMG 269
           L YE EAR+KDPV G
Sbjct: 86  LAYEAEARVKDPVYG 100



 Score = 77.0 bits (188), Expect(2) = 1e-49
 Identities = 42/60 (70%), Positives = 49/60 (81%), Gaps = 7/60 (11%)
 Frame = +2

Query: 263 YGCVGAISVLQRQV*RLQKELDAANADLLRYACGE----IPTAMPVAA---IATGMTAAS 421
           YGCVGAISVLQRQV RLQKELDAA+A+LLRYACG+    IPTA+PV+A   ++T MT  S
Sbjct: 99  YGCVGAISVLQRQVHRLQKELDAAHAELLRYACGDVAAGIPTALPVSAAPRLSTAMTTTS 158


>gb|AFJ42328.1| Ramosa2, partial [Cymbopogon flexuosus]
          Length = 267

 Score =  146 bits (368), Expect(2) = 2e-49
 Identities = 65/75 (86%), Positives = 71/75 (94%)
 Frame = +3

Query: 45  PCAACKFLRRKCIPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNEVLPH*REDAVNS 224
           PCAACKFLRRKC+PGC+FAPYFPPEEPQKFANVHK+FGASNVTKLLNE+LPH REDAV+S
Sbjct: 26  PCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKVFGASNVTKLLNELLPHQREDAVSS 85

Query: 225 LVYEVEARMKDPVMG 269
           L YE EAR+KDPV G
Sbjct: 86  LAYEAEARVKDPVYG 100



 Score = 76.6 bits (187), Expect(2) = 2e-49
 Identities = 42/61 (68%), Positives = 49/61 (80%), Gaps = 8/61 (13%)
 Frame = +2

Query: 263 YGCVGAISVLQRQV*RLQKELDAANADLLRYACGE-----IPTAMPVAA---IATGMTAA 418
           YGCVGAISVLQRQV RLQKELDAA+A+LLRYACG+     IPTA+PV+A   ++T MT  
Sbjct: 99  YGCVGAISVLQRQVHRLQKELDAAHAELLRYACGDVAAAGIPTALPVSAAPRLSTAMTTT 158

Query: 419 S 421
           S
Sbjct: 159 S 159


>gb|ACG41691.1| ramosa 2 [Zea mays]
          Length = 261

 Score =  146 bits (368), Expect(2) = 5e-49
 Identities = 65/75 (86%), Positives = 71/75 (94%)
 Frame = +3

Query: 45  PCAACKFLRRKCIPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNEVLPH*REDAVNS 224
           PCAACKFLRRKC+PGC+FAPYFPPEEPQKFANVHK+FGASNVTKLLNE+LPH REDAV+S
Sbjct: 30  PCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKVFGASNVTKLLNELLPHQREDAVSS 89

Query: 225 LVYEVEARMKDPVMG 269
           L YE EAR+KDPV G
Sbjct: 90  LAYEAEARVKDPVYG 104



 Score = 75.1 bits (183), Expect(2) = 5e-49
 Identities = 39/56 (69%), Positives = 46/56 (82%), Gaps = 4/56 (7%)
 Frame = +2

Query: 263 YGCVGAISVLQRQV*RLQKELDAANADLLRYACGE----IPTAMPVAAIATGMTAA 418
           YGCVGAISVLQRQV RLQKELDAA+A+LLRYACG+    IPTA+PV + A  ++ A
Sbjct: 103 YGCVGAISVLQRQVHRLQKELDAAHAELLRYACGDVAAGIPTALPVVSAAPRLSTA 158


>ref|NP_001131918.1| ramosa2 [Zea mays] gi|84104903|gb|ABC54560.1| ramosa 2 [Zea mays]
           gi|194692918|gb|ACF80543.1| unknown [Zea mays]
           gi|414876149|tpg|DAA53280.1| TPA: ramosa2 [Zea mays]
          Length = 261

 Score =  146 bits (368), Expect(2) = 5e-49
 Identities = 65/75 (86%), Positives = 71/75 (94%)
 Frame = +3

Query: 45  PCAACKFLRRKCIPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNEVLPH*REDAVNS 224
           PCAACKFLRRKC+PGC+FAPYFPPEEPQKFANVHK+FGASNVTKLLNE+LPH REDAV+S
Sbjct: 30  PCAACKFLRRKCLPGCVFAPYFPPEEPQKFANVHKVFGASNVTKLLNELLPHQREDAVSS 89

Query: 225 LVYEVEARMKDPVMG 269
           L YE EAR+KDPV G
Sbjct: 90  LAYEAEARVKDPVYG 104



 Score = 75.1 bits (183), Expect(2) = 5e-49
 Identities = 39/56 (69%), Positives = 46/56 (82%), Gaps = 4/56 (7%)
 Frame = +2

Query: 263 YGCVGAISVLQRQV*RLQKELDAANADLLRYACGE----IPTAMPVAAIATGMTAA 418
           YGCVGAISVLQRQV RLQKELDAA+A+LLRYACG+    IPTA+PV + A  ++ A
Sbjct: 103 YGCVGAISVLQRQVHRLQKELDAAHAELLRYACGDVAAGIPTALPVVSAAPRLSTA 158


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