BLASTX nr result

ID: Dioscorea21_contig00025900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025900
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001173034.1| Os02g0577501 [Oryza sativa Japonica Group] g...    69   5e-10
ref|XP_002454060.1| hypothetical protein SORBIDRAFT_04g023910 [S...    69   5e-10
gb|ADX60182.1| mTERF transcription factor [Zea mays]                   68   7e-10
ref|NP_001141758.1| uncharacterized protein LOC100273894 [Zea ma...    68   7e-10
gb|EAY86412.1| hypothetical protein OsI_07791 [Oryza sativa Indi...    67   1e-09

>ref|NP_001173034.1| Os02g0577501 [Oryza sativa Japonica Group]
           gi|50725255|dbj|BAD34257.1| mitochondrial transcription
           termination factor-like protein [Oryza sativa Japonica
           Group] gi|125582622|gb|EAZ23553.1| hypothetical protein
           OsJ_07251 [Oryza sativa Japonica Group]
           gi|255671020|dbj|BAH91763.1| Os02g0577501 [Oryza sativa
           Japonica Group]
          Length = 282

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/67 (55%), Positives = 44/67 (65%)
 Frame = +1

Query: 109 GLLFREKLLYLQRDLRIDASRALAANPALRSAPLPSLRAASDALLSHGFLPDDAARVLSH 288
           G+ FR KL +L  +L +D    LA +P LR+APLP LRA+   LLSHG    DAARV S 
Sbjct: 32  GVEFRRKLYFLSSELHLDPFPLLALHPPLRAAPLPQLRASLALLLSHGLSAGDAARVFSA 91

Query: 289 HPSLLTS 309
            PSLLTS
Sbjct: 92  FPSLLTS 98


>ref|XP_002454060.1| hypothetical protein SORBIDRAFT_04g023910 [Sorghum bicolor]
           gi|241933891|gb|EES07036.1| hypothetical protein
           SORBIDRAFT_04g023910 [Sorghum bicolor]
          Length = 279

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/75 (50%), Positives = 44/75 (58%)
 Frame = +1

Query: 85  ILTSTSDAGLLFREKLLYLQRDLRIDASRALAANPALRSAPLPSLRAASDALLSHGFLPD 264
           I T    AG+ FR K+ +L  +L +D    LA NP LRSAPLP LR +   L SHG    
Sbjct: 18  IATGAGGAGVEFRRKIRFLSSELHLDPFPLLAINPVLRSAPLPLLRDSLRLLTSHGLTAR 77

Query: 265 DAARVLSHHPSLLTS 309
           DA RV S  PSLLTS
Sbjct: 78  DATRVFSAFPSLLTS 92


>gb|ADX60182.1| mTERF transcription factor [Zea mays]
          Length = 277

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/75 (52%), Positives = 45/75 (60%)
 Frame = +1

Query: 85  ILTSTSDAGLLFREKLLYLQRDLRIDASRALAANPALRSAPLPSLRAASDALLSHGFLPD 264
           I T    AG+ FR K+ +L  +L +D    LA NP LRSAPLP LR +   L SHG    
Sbjct: 16  ITTDGGGAGVEFRRKIHFLSSELHVDPFPLLAINPMLRSAPLPLLRDSLRLLTSHGLTTL 75

Query: 265 DAARVLSHHPSLLTS 309
           DAARV S  PSLLTS
Sbjct: 76  DAARVFSAFPSLLTS 90


>ref|NP_001141758.1| uncharacterized protein LOC100273894 [Zea mays]
           gi|194705836|gb|ACF87002.1| unknown [Zea mays]
           gi|413922813|gb|AFW62745.1| putative mitochondrial
           transcription termination factor family protein [Zea
           mays]
          Length = 279

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/75 (52%), Positives = 45/75 (60%)
 Frame = +1

Query: 85  ILTSTSDAGLLFREKLLYLQRDLRIDASRALAANPALRSAPLPSLRAASDALLSHGFLPD 264
           I T    AG+ FR K+ +L  +L +D    LA NP LRSAPLP LR +   L SHG    
Sbjct: 18  ITTDGGGAGVEFRRKIHFLSSELHVDPFPLLAINPMLRSAPLPLLRDSLRLLTSHGLTTL 77

Query: 265 DAARVLSHHPSLLTS 309
           DAARV S  PSLLTS
Sbjct: 78  DAARVFSAFPSLLTS 92


>gb|EAY86412.1| hypothetical protein OsI_07791 [Oryza sativa Indica Group]
          Length = 279

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/67 (55%), Positives = 43/67 (64%)
 Frame = +1

Query: 109 GLLFREKLLYLQRDLRIDASRALAANPALRSAPLPSLRAASDALLSHGFLPDDAARVLSH 288
           G+ FR KL +L  +L +D    LA +P LRSAPLP LR +   LLSHG    DAARV S 
Sbjct: 29  GVEFRRKLHFLSSELHLDPFPLLALHPPLRSAPLPQLRGSLALLLSHGLSAGDAARVYSA 88

Query: 289 HPSLLTS 309
            PSLLTS
Sbjct: 89  FPSLLTS 95


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