BLASTX nr result

ID: Dioscorea21_contig00025894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025894
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45
emb|CBI25448.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002272996.1| PREDICTED: U-box domain-containing protein 1...   182   2e-44
ref|XP_002528322.1| ubiquitin-protein ligase, putative [Ricinus ...   179   2e-43
emb|CAN60363.1| hypothetical protein VITISV_024685 [Vitis vinifera]   178   4e-43

>ref|XP_002311243.1| predicted protein [Populus trichocarpa] gi|222851063|gb|EEE88610.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score =  185 bits (469), Expect = 4e-45
 Identities = 98/129 (75%), Positives = 106/129 (82%)
 Frame = +2

Query: 2   MGSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLGSRDPRTQENAVTALLNLS 181
           MGSPEIQRQAAYELRLLAKTGMDNR+IIAEAGAIPFLVTLL S DPR QENAVTALLNLS
Sbjct: 407 MGSPEIQRQAAYELRLLAKTGMDNRKIIAEAGAIPFLVTLLSSTDPRIQENAVTALLNLS 466

Query: 182 IFDNNKVLIMAAGALDSIIEVLCSGXXXXXXXXXXXTIFSLSMVDECKVTIGTRQAVITG 361
           IFDNNK+LIMAAG++DSII VL SG           TIFSLS++ +CKVTIGTR    + 
Sbjct: 467 IFDNNKILIMAAGSIDSIINVLESGKTMEARENAAATIFSLSIISDCKVTIGTRPRAFSA 526

Query: 362 LVDLLREGT 388
           LV LLREGT
Sbjct: 527 LVGLLREGT 535


>emb|CBI25448.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  182 bits (463), Expect = 2e-44
 Identities = 96/128 (75%), Positives = 104/128 (81%)
 Frame = +2

Query: 5   GSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLGSRDPRTQENAVTALLNLSI 184
           GSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLL S DPR QENAVTALLNLSI
Sbjct: 238 GSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSI 297

Query: 185 FDNNKVLIMAAGALDSIIEVLCSGXXXXXXXXXXXTIFSLSMVDECKVTIGTRQAVITGL 364
           FDNNK+LIMAAGA+D+I++VL SG            IFSLSM+D+CKVTIG     +  L
Sbjct: 298 FDNNKILIMAAGAIDNIVDVLQSGKTMEARENAAAAIFSLSMIDDCKVTIGAHPRAMPAL 357

Query: 365 VDLLREGT 388
           V LLREGT
Sbjct: 358 VALLREGT 365


>ref|XP_002272996.1| PREDICTED: U-box domain-containing protein 13 [Vitis vinifera]
          Length = 688

 Score =  182 bits (463), Expect = 2e-44
 Identities = 96/128 (75%), Positives = 104/128 (81%)
 Frame = +2

Query: 5   GSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLGSRDPRTQENAVTALLNLSI 184
           GSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLL S DPR QENAVTALLNLSI
Sbjct: 408 GSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSI 467

Query: 185 FDNNKVLIMAAGALDSIIEVLCSGXXXXXXXXXXXTIFSLSMVDECKVTIGTRQAVITGL 364
           FDNNK+LIMAAGA+D+I++VL SG            IFSLSM+D+CKVTIG     +  L
Sbjct: 468 FDNNKILIMAAGAIDNIVDVLQSGKTMEARENAAAAIFSLSMIDDCKVTIGAHPRAMPAL 527

Query: 365 VDLLREGT 388
           V LLREGT
Sbjct: 528 VALLREGT 535


>ref|XP_002528322.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223532277|gb|EEF34080.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 695

 Score =  179 bits (454), Expect = 2e-43
 Identities = 96/129 (74%), Positives = 104/129 (80%)
 Frame = +2

Query: 2   MGSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLGSRDPRTQENAVTALLNLS 181
           MGSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLV LL S+DPR QENAVTALLNLS
Sbjct: 414 MGSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVILLSSKDPRIQENAVTALLNLS 473

Query: 182 IFDNNKVLIMAAGALDSIIEVLCSGXXXXXXXXXXXTIFSLSMVDECKVTIGTRQAVITG 361
           IFDNNK+LIMAAGA+DSI+ VL SG            IFSLSM+++CKVTIG     I  
Sbjct: 474 IFDNNKILIMAAGAIDSIVNVLESGNTMEARENAAAAIFSLSMLNDCKVTIGACPRAIPA 533

Query: 362 LVDLLREGT 388
           LV LL+EGT
Sbjct: 534 LVRLLKEGT 542


>emb|CAN60363.1| hypothetical protein VITISV_024685 [Vitis vinifera]
          Length = 668

 Score =  178 bits (452), Expect = 4e-43
 Identities = 94/126 (74%), Positives = 102/126 (80%)
 Frame = +2

Query: 5   GSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLGSRDPRTQENAVTALLNLSI 184
           GSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLL S DPR QENAVTALLNLSI
Sbjct: 408 GSPEIQRQAAYELRLLAKTGMDNRRIIAEAGAIPFLVTLLSSHDPRIQENAVTALLNLSI 467

Query: 185 FDNNKVLIMAAGALDSIIEVLCSGXXXXXXXXXXXTIFSLSMVDECKVTIGTRQAVITGL 364
           FDNNK+LIMAAGA+D+I++VL SG            IFSLSM+D+CKVTIG     +  L
Sbjct: 468 FDNNKILIMAAGAIDNIVDVLQSGKTMEARENAAAAIFSLSMIDDCKVTIGAHPRAMPAL 527

Query: 365 VDLLRE 382
           V LLRE
Sbjct: 528 VALLRE 533


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