BLASTX nr result

ID: Dioscorea21_contig00025873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025873
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADQ38902.1| bHLH transcription factor [Musa acuminata AAA Group]   105   4e-21
ref|XP_002460394.1| hypothetical protein SORBIDRAFT_02g027460 [S...    94   1e-17
gb|ADL36596.1| BHLH domain class transcription factor [Malus x d...    88   6e-16
ref|XP_002278322.2| PREDICTED: transcription factor BIM2-like [V...    88   8e-16
emb|CBI16924.3| unnamed protein product [Vitis vinifera]               88   8e-16

>gb|ADQ38902.1| bHLH transcription factor [Musa acuminata AAA Group]
          Length = 331

 Score =  105 bits (262), Expect = 4e-21
 Identities = 59/105 (56%), Positives = 78/105 (74%), Gaps = 6/105 (5%)
 Frame = +3

Query: 3   NSDMLNEQEELAVDEGTISVSSVYSQGLLTSLTEALQSSGVDLSQASISVRINFGKRVTD 182
           +S MLNE EEL +DEGTIS+SSVYSQGLLT+L++A+ SSGVDLSQASISV+IN GK  + 
Sbjct: 228 SSGMLNEHEELIIDEGTISISSVYSQGLLTALSQAMASSGVDLSQASISVQINLGKGASK 287

Query: 183 R--RPGMANAKEHGDGNRALGHSTVGSTGCG----EAERMPKRRR 299
           R     M+NAK+H D +    H  +G+T  G    E+E++PKR++
Sbjct: 288 RPTTANMSNAKDHSDNSHI--HQIMGNTVPGSNIEESEQVPKRQK 330


>ref|XP_002460394.1| hypothetical protein SORBIDRAFT_02g027460 [Sorghum bicolor]
           gi|241923771|gb|EER96915.1| hypothetical protein
           SORBIDRAFT_02g027460 [Sorghum bicolor]
          Length = 507

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 58/105 (55%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
 Frame = +3

Query: 3   NSDMLNEQEELAVDEGTISVSSVYSQGLLTSLTEALQSSGVDLSQASISVRINFGKRVTD 182
           NS+MLN Q+ LA+DEGTISVSS YSQ LL SLT ALQSSGVDLSQASISV+IN GKR   
Sbjct: 403 NSEMLNNQQ-LAIDEGTISVSSNYSQELLNSLTHALQSSGVDLSQASISVQINLGKRAVK 461

Query: 183 RRPGMANAKEHGD--GNRALGHSTVG-STGCGEAERMPKRRRSEN 308
           R    +N+KE  D   +  LGH  +    G        KR +  N
Sbjct: 462 RPVAPSNSKEPADPASSNELGHQLMMLGAGADNLSHTTKRHKPGN 506


>gb|ADL36596.1| BHLH domain class transcription factor [Malus x domestica]
          Length = 334

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/91 (50%), Positives = 61/91 (67%)
 Frame = +3

Query: 6   SDMLNEQEELAVDEGTISVSSVYSQGLLTSLTEALQSSGVDLSQASISVRINFGKRVTDR 185
           SD+L++QEEL ++ GTIS+SSVYSQGLL SL++ALQS+GVDLSQASISV+I+ G R    
Sbjct: 233 SDVLSQQEELTIEGGTISISSVYSQGLLNSLSQALQSAGVDLSQASISVQIDLGNRANRG 292

Query: 186 RPGMANAKEHGDGNRALGHSTVGSTGCGEAE 278
            P +  A +  D   +   +T      G  E
Sbjct: 293 LPSVTPASKDNDNPHSSNQTTAHFRDAGSGE 323


>ref|XP_002278322.2| PREDICTED: transcription factor BIM2-like [Vitis vinifera]
          Length = 345

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/104 (49%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
 Frame = +3

Query: 6   SDMLNEQEELAVDEGTISVSSVYSQGLLTSLTEALQSSGVDLSQASISVRINFGKRVT-D 182
           S+ +NE EEL ++ GT+S+SS YSQGLL SLT+ALQSSGVDLSQASISV+I+ GKR    
Sbjct: 241 SNTVNEPEELTIESGTVSISSAYSQGLLNSLTQALQSSGVDLSQASISVQIDIGKRANKG 300

Query: 183 RRPGMANAKEH---GDGNRALGHSTVGSTGCGEAERMPKRRRSE 305
                +NAK++      NR + HS   S+   ++++  KR R++
Sbjct: 301 LNATTSNAKDYENPSPSNRTMAHSGFRSSS-EDSDQAHKRLRTD 343


>emb|CBI16924.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/104 (49%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
 Frame = +3

Query: 6   SDMLNEQEELAVDEGTISVSSVYSQGLLTSLTEALQSSGVDLSQASISVRINFGKRVT-D 182
           S+ +NE EEL ++ GT+S+SS YSQGLL SLT+ALQSSGVDLSQASISV+I+ GKR    
Sbjct: 298 SNTVNEPEELTIESGTVSISSAYSQGLLNSLTQALQSSGVDLSQASISVQIDIGKRANKG 357

Query: 183 RRPGMANAKEH---GDGNRALGHSTVGSTGCGEAERMPKRRRSE 305
                +NAK++      NR + HS   S+   ++++  KR R++
Sbjct: 358 LNATTSNAKDYENPSPSNRTMAHSGFRSSS-EDSDQAHKRLRTD 400


Top