BLASTX nr result

ID: Dioscorea21_contig00025838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00025838
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   123   1e-26
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   123   1e-26
ref|XP_003561547.1| PREDICTED: FACT complex subunit SPT16-like [...   121   7e-26
ref|XP_003557719.1| PREDICTED: FACT complex subunit SPT16-like [...   121   7e-26
gb|EEE60743.1| hypothetical protein OsJ_14286 [Oryza sativa Japo...   119   3e-25

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/70 (84%), Positives = 63/70 (90%)
 Frame = -2

Query: 211 ENKVSHSSLMDDTEKVILDPLKVKVKLKAENVDICYPPIFQSGGEFDLRPSASSTDDNFY 32
           E KVSHSSLMDDTEK IL+P +VKVKLKAENVDICYPPIFQSGGEFDLRPSASS D+N Y
Sbjct: 231 EKKVSHSSLMDDTEKAILEPARVKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDENLY 290

Query: 31  YVSKSVILCA 2
           Y S SVI+CA
Sbjct: 291 YDSTSVIICA 300


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/70 (84%), Positives = 63/70 (90%)
 Frame = -2

Query: 211 ENKVSHSSLMDDTEKVILDPLKVKVKLKAENVDICYPPIFQSGGEFDLRPSASSTDDNFY 32
           E KVSHSSLMDDTEK IL+P +VKVKLKAENVDICYPPIFQSGGEFDLRPSASS D+N Y
Sbjct: 231 EKKVSHSSLMDDTEKAILEPARVKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDENLY 290

Query: 31  YVSKSVILCA 2
           Y S SVI+CA
Sbjct: 291 YDSTSVIICA 300


>ref|XP_003561547.1| PREDICTED: FACT complex subunit SPT16-like [Brachypodium
           distachyon]
          Length = 1082

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/70 (80%), Positives = 62/70 (88%)
 Frame = -2

Query: 211 ENKVSHSSLMDDTEKVILDPLKVKVKLKAENVDICYPPIFQSGGEFDLRPSASSTDDNFY 32
           E KVSHSSLMDDTEK+ILDPLK KVKLKAEN+DICYPP+FQSGG+FDL+P ASS DD  Y
Sbjct: 221 ERKVSHSSLMDDTEKIILDPLKAKVKLKAENIDICYPPVFQSGGKFDLKPGASSNDDYLY 280

Query: 31  YVSKSVILCA 2
           Y S SVI+CA
Sbjct: 281 YDSASVIICA 290


>ref|XP_003557719.1| PREDICTED: FACT complex subunit SPT16-like [Brachypodium
           distachyon]
          Length = 1059

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/70 (80%), Positives = 62/70 (88%)
 Frame = -2

Query: 211 ENKVSHSSLMDDTEKVILDPLKVKVKLKAENVDICYPPIFQSGGEFDLRPSASSTDDNFY 32
           E KVSHSSLMDDTEK+ILDPLK KVKLKAEN+DICYPP+FQSGG+FDL+P ASS DD  Y
Sbjct: 221 ERKVSHSSLMDDTEKIILDPLKAKVKLKAENIDICYPPVFQSGGKFDLKPGASSNDDYLY 280

Query: 31  YVSKSVILCA 2
           Y S SVI+CA
Sbjct: 281 YDSASVIICA 290


>gb|EEE60743.1| hypothetical protein OsJ_14286 [Oryza sativa Japonica Group]
          Length = 430

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/70 (80%), Positives = 62/70 (88%)
 Frame = -2

Query: 211 ENKVSHSSLMDDTEKVILDPLKVKVKLKAENVDICYPPIFQSGGEFDLRPSASSTDDNFY 32
           E KV+HSSLMD+TEK ILDPLKVKVKLKAENVDICYPP+FQSGG+FDL+P ASS DD  Y
Sbjct: 202 ERKVTHSSLMDETEKAILDPLKVKVKLKAENVDICYPPVFQSGGKFDLKPGASSNDDYLY 261

Query: 31  YVSKSVILCA 2
           Y S SVI+CA
Sbjct: 262 YDSASVIICA 271


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